sp|O22928|PUSH_ARATH ----> Putative tRNA pseudouridine synthase
Intron 1 GTACTCTTTC ... TTTCTTACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 40.59 | 30 | 23 | 18 |
| A2 | 14.71 | 29 | 1 | 9 |
| A3 | 26.32 | 28 | 9 | 11 |
| A4 | 28.57 | 25 | 10 | 10 |
| A5 | 33.33 | 6 | 3 | 3 |
| A6 | 29.39 | 179 | 55 | 94 |
| A7 | 27.15 | 161 | 38 | 82 |
| A8 | 29.66 | 217 | 61 | 122 |
| A9 | 29.39 | 185 | 44 | 110 |
| A10 | 25 | 135 | 38 | 52 |
>TRINITY_DN115481_c0_g1_i4 from sample A1 / Example spliced isoformTAATAGCCAGAGCTCTGAGAAAGTAAGTTTATTTTTGTTTTCCAGTTTTTGAAAATTTGAAGGAATAAAATGATAGGGTTTTTAAAGGAAGTACTGGGGGGATTGGTTCTGCATGTTTTCAAGTCTATGGACTTGTTAATTAAAAGCATATTCCTGGATTTTTTTATTATTCTTTTTGGCTTTTGTGATTGTGTGCAATA
TCAGTAGCAGCTTTTGATTTCTGTCTGCCTAAATCTCATTTCTTTCACATGTTTTAACTTTTCTGGGGCTTTCTGCTCAGGGATGTGCATATGAATGTGCCCACAGCTCCTGAGTTAGGGTTGTTTCTGGACGAGAGCTTCTTCCCTGCTTACAACCAGAAATGGCAAGCTACGCACGAGGATATCTCTCTGAAAGAATT
TGAGCAGCAAATAATTGAGTTCAAACAGAAGTATATTTATACTCACATAGCATCCACTGAAGTTAAGGATGGAGTAGTAGCCGTTTGGTTGCATTCTCTCAATCATCGGAACTACGTTGAGTTTGCTGGTGAAAGGGAAGCAGAAAATGTTCAGAATGGGGCAGAATCTATTCCACCCAAGGCAAACATGGCTGACATGG
AAATGCTTGAAAGTTAACTCATACCAATGCAAATTAGGTATCTCATTTCATGGTTCCTGCATTTCGCTGCTGCTTCTTTTGCGAGAGAATTTCTTACCTGGAGAACCTGGTTTAAAAGTGGCCTATATTTTGAACTGAATTCCTGGTCACATCTTTGCAGCTCACCTTGCAAAGTAAGATGATGAGATTACAAACCTATG
TAAATTGGGGAGCGGAAAATTATAAGTTGATGTTGATTTTTGAAGAAAAGTATCATACGACACCTCTGAAGAGAGTGCTATTTTCTTTGACATTCTTTAGCCATGGATATTTTGACATCTACTGGTGCAACATTCACCAGCAAACCATTTTTTGATGAGTTCTACAAGATTTTGCTTTATATATACACATACACACCACA
CCTTAAGACCATGGCTTTCTAACATACAGGGGTTGCATGTGCAAAGTGATTGAACTGCTGGGAACATTTACTATATTTATGCATAAGAGTGCGGTACAGAATGTTCAATTGTTTTTTAATATGGAACTTATTGTATTTTAACTTTTTCACTTCAGATATGCC
>TRINITY_DN115481_c0_g1_i2 from sample A1 / Example unspliced isoform:CCCCGGCAGAAAAAGGACTTACACATCCTTACTCTCTCTCTATATCCTTACTCTACATATGAGACGGGCGAATGCTTATTTGTCGCCTATTAACCCTATATTAACCTCTCCTTATAAACAGGAACCTGAAGAAAGCTGCGTTGAGTGGAAAGGAAGGCATATACCCTGCACGGTGAGCAAACGAATAATATAGAAATCTC
AATATCAATGGAAAACGAGCAAGCTCCTTCAGAGAAAGGTTCGGAGGATCCCATTCCCAGTCTGGAGAAGTCCAGTTTGGCCACAAATGGAGAAAAATCCACCGTTGCAGGGGAAAAACCCACATCGGTGGAGGAGGAATCAGTTGTGGTAAGAACTGATGATATCGTAAACATCCACATCAATGAAAGCTCAGCGCAAG
CTGATGCCCTGGCAGGCATTCAAGATTCATGCTTGGGACATCCTTCCACAGCCGATGCTCTGAACCCGAATAGGAAAAGGTCCAGAGACCAGCCAGAGATGGCTCAGCCTGAACACCCACCAAATACAGAGCCAGAAATGGTGGAAAAAACTCCAGATATAGAAGAAGAAAAAAAGGCTACAAAGGTCGCAAAGTTCACT
GAAGAAGAAGATGACGCAGATGAAACGAGAGAAGAGGGGGCTCCCCCACGCCATCCTAAGCCCAAGAGGAGGAAAATAGCCATTTTTGTAGCATATTGTGGGATTGGGTATCAGGGGATGCAGAGGAATCCGGGGGCTAAAACAATAGAGGGTGATTTGGAGGAGGCTTTGTTCAAGGCTGGCGCAATCTCGCAAGACCA
GTATGGGGACCCCAGGAAAGTGGACTGGATGAGGTCTGCCAGGACAGACAAGGGGGTGAGTGCTGTTGGGCAGGTGGTTTCTGGGAGATTTTTCATAGACCCACCAGGGTTTACGGAGAGGGTCAATTCCCACCTCCCTGAGCAGATTAGGATTCTTGGATACAAGAGGGTAACTGCATCATTCAGTGCCAAGAAGTTCT
GTGACAGAAGAAGGTATGAATATGTTATCCCTGTTTTTGCTTTGGATCCTTCTGCTCATAGGGATAGGGAGAGTGTTTTGGCCAGCGAGGGCAAGGAGGGTGCTCTAGTTAAGTGCTTAGAGTGCTCTGAGAGAGGCAGGAAGGTCGCTGGGCTCATGGGTAGAAAAAATGAAAATGGTAAGCTGTTGGAAGCCGTGAAT
AATGATGATTTGAATGAGAAAACTTTGACAGAACATGAACAGATAGAAAAGATTATAGATATGCACAATTCAGAAAAAAATTCCCAACTTGAAAATGTATCTGTCCCAGTAAATTGTGATGTCAGTTGTTACAAGAACCCAAACGTGGAGACAACAGCATTCGTTTCCGAGTTAAATTCGGAGCAAGCTGTGTTCCAAGA
AGTGCCTGAACTTGAGAACAGTTCACTAGGGTTAGCTCCCGAAACTGCCAATGCTAGTTTTGAGAAAAACCCAAATGAAGGATTGAACTGCTCCCAGACAATCACGTTGGTTCCTAATTCGAACTTGGAACAAACTTTTCCTCGGGGAGGATCTGAACATAATAATAATTTGGGTCCGCAGACCGATGGTGCACCTGCGA
AGAGCAGCTTCCAATATGGAGAGAAGGAAAGGGATCGCTTCAACAGAATCCTGAAGCAGTTTGTTGGGACTCATAATTTCCACAATTTAACGACCCGCATTAAAGCAGAAGATCCAGCTGCAAATCGGTACATTCTGTCATTTGAGGCCAGTGATATTTTTACTATTAATGGCATAGATTTTGTGAAATGCATAGTTGTT
GGTCAGAGCTTTGTGCTTCACCAGATACGAAAAATGATAGGCCTGGCTATTGCGGTGATGCGGAATTGTGCTCCTGAGTCCATAATAGCCAGAGCTCTGAGAAAGGATGTGCATATGAATGTGCCCACAGCTCCTGAGTTAGGGTTGTTTCTGGACGAGAGCTTCTTCCCTGCTTACAACCAGAAATGGCAAGCTACGCA
CGAGGATATCTCTCTGAAAGAATTTGAGCAGCAAATAATTGAGTTCAAACAGAAGTATATTTATACTCACATAGCATCCACTGAAGTTAAGGATGGAGTAGTAGCCGTTTGGTTGCATTCTCTCAATCATCGGAACTACGTTGAGTTTGCTGGTGAAAGGGAAGCAGAAAATGTTCAGAATGGGGCAGAATCTATTCCAC
CCAAGGCAAACATGGCTGACATGGAAATGCTTGAAAGTTAACTCATACCAATGCAAATTAGGTATCTCATTTCATGGTTCCTGCATTTCGCTGCTGCTTCTTTTGCGAGAGAATTTCTTACCTGGAGAACCTGGTTTAAAAGTGGCCTATATTTTGAACTGAATTCCTGGTCACATCTTTGCAGCTCACCTTgtactctt
tcaggctccacccttcctgcgtgcttactttttctcttagttcttttgctagctttctttattggcaatgcatttttacttctgtttttatgctttctaaggctgttctatttcttacagGCAAAGTAAGATGATGAGATTACAAACCTATGTAAATTGGGGAGCGGAAAATTATAAGTTGATGTTGATTTTTGAAGAAA
AGTATCATACGACACCTCTGAAGAGAGTGCTATTTTCTTTGACATTCTTTAGCCATGGATATTTTGACATCTACTGGTGCAACATTCACCAGCAAACCATTTTTTGATGAGTTCTACAAGATTTTGCTTTATATATACACATACACACCACACCTTAAGACCATGGCTTTCTAACATACAGGGGTTGCATGTGCAAAGTG
ATTGAACTGCTGGGAACATTTACTATATTTATGCATAAGAGTGCGGTACAGAATGTTCAATTGTTTTTTAATATGGAACTTATTGTATTTTAACTTTTTCACTTCAGATATGCC
Intron 2 GTATCTCATT ... TTTCTTACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 62.41 | 25 | 65 | 18 |
| A2 | 39.82 | 34 | 36 | 9 |
| A3 | 59.14 | 19 | 44 | 11 |
| A4 | 50 | 27 | 44 | 10 |
| A5 | 36.36 | 14 | 13 | 3 |
| A6 | 45.14 | 189 | 217 | 94 |
| A7 | 46.52 | 169 | 212 | 82 |
| A8 | 41.11 | 280 | 269 | 122 |
| A9 | 44.25 | 218 | 236 | 110 |
| A10 | 42.36 | 117 | 120 | 52 |
>TRINITY_DN115481_c0_g1_i5 from sample A1 / Example spliced isoformCCCCGGCAGAAAAAGGACTTACACATCCTTACTCTCTCTCTATATCCTTACTCTACATATGAGACGGGCGAATGCTTATTTGTCGCCTATTAACCCTATATTAACCTCTCCTTATAAACAGGAACCTGAAGAAAGCTGCGTTGAGTGGAAAGGAAGGCATATACCCTGCACGGTGAGCAAACGAATAATATAGAAATCTC
AATATCAATGGAAAACGAGCAAGCTCCTTCAGAGAAAGGTTCGGAGGATCCCATTCCCAGTCTGGAGAAGTCCAGTTTGGCCACAAATGGAGAAAAATCCACCGTTGCAGGGGAAAAACCCACATCGGTGGAGGAGGAATCAGTTGTGGTAAGAACTGATGATATCGTAAACATCCACATCAATGAAAGCTCAGCGCAAG
CTGATGCCCTGGCAGGCATTCAAGATTCATGCTTGGGACATCCTTCCACAGCCGATGCTCTGAACCCGAATAGGAAAAGGTCCAGAGACCAGCCAGAGATGGCTCAGCCTGAACACCCACCAAATACAGAGCCAGAAATGGTGGAAAAAACTCCAGATATAGAAGAAGAAAAAAAGGCTACAAAGGTCGCAAAGTTCACT
GAAGAAGAAGATGACGCAGATGAAACGAGAGAAGAGGGGGCTCCCCCACGCCATCCTAAGCCCAAGAGGAGGAAAATAGCCATTTTTGTAGCATATTGTGGGATTGGGTATCAGGGGATGCAGAGGAATCCGGGGGCTAAAACAATAGAGGGTGATTTGGAGGAGGCTTTGTTCAAGGCTGGCGCAATCTCGCAAGACCA
GTATGGGGACCCCAGGAAAGTGGACTGGATGAGGTCTGCCAGGACAGACAAGGGGGTGAGTGCTGTTGGGCAGGTGGTTTCTGGGAGATTTTTCATAGACCCACCAGGGTTTACGGAGAGGGTCAATTCCCACCTCCCTGAGCAGATTAGGATTCTTGGATACAAGAGGGTAACTGCATCATTCAGTGCCAAGAAGTTCT
GTGACAGAAGAAGGTATGAATATGTTATCCCTGTTTTTGCTTTGGATCCTTCTGCTCATAGGGATAGGGAGAGTGTTTTGGCCAGCGAGGGCAAGGAGGGTGCTCTAGTTAAGTGCTTAGAGTGCTCTGAGAGAGGCAGGAAGGTCGCTGGGCTCATGGGTAGAAAAAATGAAAATGGTAAGCTGTTGGAAGCCGTGAAT
AATGATGATTTGAATGAGAAAACTTTGACAGAACATGAACAGATAGAAAAGATTATAGATATGCACAATTCAGAAAAAAATTCCCAACTTGAAAATGTATCTGTCCCAGTAAATTGTGATGTCAGTTGTTACAAGAACCCAAACGTGGAGACAACAGCATTCGTTTCCGAGTTAAATTCGGAGCAAGCTGTGTTCCAAGA
AGTGCCTGAACTTGAGAACAGTTCACTAGGGTTAGCTCCCGAAACTGCCAATGCTAGTTTTGAGAAAAACCCAAATGAAGGATTGAACTGCTCCCAGACAATCACGTTGGTTCCTAATTCGAACTTGGAACAAACTTTTCCTCGGGGAGGATCTGAACATAATAATAATTTGGGTCCGCAGACCGATGGTGCACCTGCGA
AGAGCAGCTTCCAATATGGAGAGAAGGAAAGGGATCGCTTCAACAGAATCCTGAAGCAGTTTGTTGGGACTCATAATTTCCACAATTTAACGACCCGCATTAAAGCAGAAGATCCAGCTGCAAATCGGTACATTCTGTCATTTGAGGCCAGTGATATTTTTACTATTAATGGCATAGATTTTGTGAAATGCATAGTTGTT
GGTCAGAGCTTTGTGCTTCACCAGATACGAAAAATGATAGGCCTGGCTATTGCGGTGATGCGGAATTGTGCTCCTGAGTCCATAATAGCCAGAGCTCTGAGAAAGGATGTGCATATGAATGTGCCCACAGCTCCTGAGTTAGGGTTGTTTCTGGACGAGAGCTTCTTCCCTGCTTACAACCAGAAATGGCAAGCTACGCA
CGAGGATATCTCTCTGAAAGAATTTGAGCAGCAAATAATTGAGTTCAAACAGAAGTATATTTATACTCACATAGCATCCACTGAAGTTAAGGATGGAGTAGTAGCCGTTTGGTTGCATTCTCTCAATCATCGGAACTACGTTGAGTTTGCTGGTGAAAGGGAAGCAGAAAATGTTCAGAATGGGGCAGAATCTATTCCAC
CCAAGGCAAACATGGCTGACATGGAAATGCTTGAAAGTTAACTCATACCAATGCAAATTAGGCAAAGTAAGATGATGAGATTACAAACCTATGTAAATTGGGGAGCGGAAAATTATAAGTTGATGTTGATTTTTGAAGAAAAGTATCATACGACACCTCTGAAGAGAGTGCTATTTTCTTTGACATTCTTTAGCCATGGA
TATTTTGACATCTACTGGTGCAACATTCACCAGCAAACCATTTTTTGATGAGTTCTACAAGATTTTGCTTTATATATACACATACACACCACACCTTAAGACCATGGCTTTCTAACATACAGGGGTTGCATGTGCAAAGTGATTGAACTGCTGGGAACATTTACTATATTTATGCATAAGAGTGCGGTACAGAATGTTCA
ATTGTTTTTTAATATGGAACTTATTGTATTTTAACTTTTTCACTTCAGATATGCC
>TRINITY_DN115481_c0_g1_i3 from sample A1 / Example unspliced isoform:TAATAGCCAGAGCTCTGAGAAAGTAAGTTTATTTTTGTTTTCCAGTTTTTGAAAATTTGAAGGAATAAAATGATAGGGTTTTTAAAGGAAGTACTGGGGGGATTGGTTCTGCATGTTTTCAAGTCTATGGACTTGTTAATTAAAAGCATATTCCTGGATTTTTTTATTATTCTTTTTGGCTTTTGTGATTGTGTGCAATA
TCAGTAGCAGCTTTTGATTTCTGTCTGCCTAAATCTCATTTCTTTCACATGTTTTAACTTTTCTGGGGCTTTCTGCTCAGGGATGTGCATATGAATGTGCCCACAGCTCCTGAGTTAGGGTTGTTTCTGGACGAGAGCTTCTTCCCTGCTTACAACCAGAAATGGCAAGCTACGCACGAGGATATCTCTCTGAAAGAATT
TGAGCAGCAAATAATTGAGTTCAAACAGAAGTATATTTATACTCACATAGCATCCACTGAAGTTAAGGATGGAGTAGTAGCCGTTTGGTTGCATTCTCTCAATCATCGGAACTACGTTGAGTTTGCTGGTGAAAGGGAAGCAGAAAATGTTCAGAATGGGGCAGAATCTATTCCACCCAAGGCAAACATGGCTGACATGG
AAATGCTTGAAAGTTAACTCATACCAATGCAAATTAGgtatctcatttcatggttcctgcatttcgctgctgcttcttttgcgagagaatttcttacctggagaacctggtttaaaagtggcctatattttgaactgaattcctggtcacatctttgcagctcaccttgtactctttcaggctccacccttcctgcgtgc
ttactttttctcttagttcttttgctagctttctttattggcaatgcatttttacttctgtttttatgctttctaaggctgttctatttcttacagGCAAAGTAAGATGATGAGATTACAAACCTATGTAAATTGGGGAGCGGAAAATTATAAGTTGATGTTGATTTTTGAAGAAAAGTATCATACGACACCTCTGAAGA
GAGTGCTATTTTCTTTGACATTCTTTAGCCATGGATATTTTGACATCTACTGGTGCAACATTCACCAGCAAACCATTTTTTGATGAGTTCTACAAGATTTTGCTTTATATATACACATACACACCACACCTTAAGACCATGGCTTTCTAACATACAGGGGTTGCATGTGCAAAGTGATTGAACTGCTGGGAACATTTACT
ATATTTATGCATAAGAGTGCGGTACAGAATGTTCAATTGTTTTTTAATATGGAACTTATTGTATTTTAACTTTTTCACTTCAGATATGCC
Intron 3 GTAAGTTTAT ... TTCTGCTCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 35.35 | 64 | 0 | 35 |
| A2 | 21.28 | 74 | 0 | 20 |
| A3 | 21.21 | 52 | 0 | 14 |
| A4 | 13.79 | 50 | 0 | 8 |
| A5 | 19.05 | 17 | 0 | 4 |
| A6 | 19.1 | 144 | 0 | 34 |
| A7 | 24.22 | 194 | 0 | 62 |
| A8 | 20.55 | 174 | 0 | 45 |
| A9 | 21.37 | 184 | 0 | 50 |
| A10 | 19.47 | 182 | 1 | 44 |
>TRINITY_DN115481_c0_g1_i2 from sample A1 / Example spliced isoformCCCCGGCAGAAAAAGGACTTACACATCCTTACTCTCTCTCTATATCCTTACTCTACATATGAGACGGGCGAATGCTTATTTGTCGCCTATTAACCCTATATTAACCTCTCCTTATAAACAGGAACCTGAAGAAAGCTGCGTTGAGTGGAAAGGAAGGCATATACCCTGCACGGTGAGCAAACGAATAATATAGAAATCTC
AATATCAATGGAAAACGAGCAAGCTCCTTCAGAGAAAGGTTCGGAGGATCCCATTCCCAGTCTGGAGAAGTCCAGTTTGGCCACAAATGGAGAAAAATCCACCGTTGCAGGGGAAAAACCCACATCGGTGGAGGAGGAATCAGTTGTGGTAAGAACTGATGATATCGTAAACATCCACATCAATGAAAGCTCAGCGCAAG
CTGATGCCCTGGCAGGCATTCAAGATTCATGCTTGGGACATCCTTCCACAGCCGATGCTCTGAACCCGAATAGGAAAAGGTCCAGAGACCAGCCAGAGATGGCTCAGCCTGAACACCCACCAAATACAGAGCCAGAAATGGTGGAAAAAACTCCAGATATAGAAGAAGAAAAAAAGGCTACAAAGGTCGCAAAGTTCACT
GAAGAAGAAGATGACGCAGATGAAACGAGAGAAGAGGGGGCTCCCCCACGCCATCCTAAGCCCAAGAGGAGGAAAATAGCCATTTTTGTAGCATATTGTGGGATTGGGTATCAGGGGATGCAGAGGAATCCGGGGGCTAAAACAATAGAGGGTGATTTGGAGGAGGCTTTGTTCAAGGCTGGCGCAATCTCGCAAGACCA
GTATGGGGACCCCAGGAAAGTGGACTGGATGAGGTCTGCCAGGACAGACAAGGGGGTGAGTGCTGTTGGGCAGGTGGTTTCTGGGAGATTTTTCATAGACCCACCAGGGTTTACGGAGAGGGTCAATTCCCACCTCCCTGAGCAGATTAGGATTCTTGGATACAAGAGGGTAACTGCATCATTCAGTGCCAAGAAGTTCT
GTGACAGAAGAAGGTATGAATATGTTATCCCTGTTTTTGCTTTGGATCCTTCTGCTCATAGGGATAGGGAGAGTGTTTTGGCCAGCGAGGGCAAGGAGGGTGCTCTAGTTAAGTGCTTAGAGTGCTCTGAGAGAGGCAGGAAGGTCGCTGGGCTCATGGGTAGAAAAAATGAAAATGGTAAGCTGTTGGAAGCCGTGAAT
AATGATGATTTGAATGAGAAAACTTTGACAGAACATGAACAGATAGAAAAGATTATAGATATGCACAATTCAGAAAAAAATTCCCAACTTGAAAATGTATCTGTCCCAGTAAATTGTGATGTCAGTTGTTACAAGAACCCAAACGTGGAGACAACAGCATTCGTTTCCGAGTTAAATTCGGAGCAAGCTGTGTTCCAAGA
AGTGCCTGAACTTGAGAACAGTTCACTAGGGTTAGCTCCCGAAACTGCCAATGCTAGTTTTGAGAAAAACCCAAATGAAGGATTGAACTGCTCCCAGACAATCACGTTGGTTCCTAATTCGAACTTGGAACAAACTTTTCCTCGGGGAGGATCTGAACATAATAATAATTTGGGTCCGCAGACCGATGGTGCACCTGCGA
AGAGCAGCTTCCAATATGGAGAGAAGGAAAGGGATCGCTTCAACAGAATCCTGAAGCAGTTTGTTGGGACTCATAATTTCCACAATTTAACGACCCGCATTAAAGCAGAAGATCCAGCTGCAAATCGGTACATTCTGTCATTTGAGGCCAGTGATATTTTTACTATTAATGGCATAGATTTTGTGAAATGCATAGTTGTT
GGTCAGAGCTTTGTGCTTCACCAGATACGAAAAATGATAGGCCTGGCTATTGCGGTGATGCGGAATTGTGCTCCTGAGTCCATAATAGCCAGAGCTCTGAGAAAGGATGTGCATATGAATGTGCCCACAGCTCCTGAGTTAGGGTTGTTTCTGGACGAGAGCTTCTTCCCTGCTTACAACCAGAAATGGCAAGCTACGCA
CGAGGATATCTCTCTGAAAGAATTTGAGCAGCAAATAATTGAGTTCAAACAGAAGTATATTTATACTCACATAGCATCCACTGAAGTTAAGGATGGAGTAGTAGCCGTTTGGTTGCATTCTCTCAATCATCGGAACTACGTTGAGTTTGCTGGTGAAAGGGAAGCAGAAAATGTTCAGAATGGGGCAGAATCTATTCCAC
CCAAGGCAAACATGGCTGACATGGAAATGCTTGAAAGTTAACTCATACCAATGCAAATTAGGTATCTCATTTCATGGTTCCTGCATTTCGCTGCTGCTTCTTTTGCGAGAGAATTTCTTACCTGGAGAACCTGGTTTAAAAGTGGCCTATATTTTGAACTGAATTCCTGGTCACATCTTTGCAGCTCACCTTGTACTCTT
TCAGGCTCCACCCTTCCTGCGTGCTTACTTTTTCTCTTAGTTCTTTTGCTAGCTTTCTTTATTGGCAATGCATTTTTACTTCTGTTTTTATGCTTTCTAAGGCTGTTCTATTTCTTACAGGCAAAGTAAGATGATGAGATTACAAACCTATGTAAATTGGGGAGCGGAAAATTATAAGTTGATGTTGATTTTTGAAGAAA
AGTATCATACGACACCTCTGAAGAGAGTGCTATTTTCTTTGACATTCTTTAGCCATGGATATTTTGACATCTACTGGTGCAACATTCACCAGCAAACCATTTTTTGATGAGTTCTACAAGATTTTGCTTTATATATACACATACACACCACACCTTAAGACCATGGCTTTCTAACATACAGGGGTTGCATGTGCAAAGTG
ATTGAACTGCTGGGAACATTTACTATATTTATGCATAAGAGTGCGGTACAGAATGTTCAATTGTTTTTTAATATGGAACTTATTGTATTTTAACTTTTTCACTTCAGATATGCC
>TRINITY_DN115481_c0_g1_i4 from sample A1 / Example unspliced isoform:TAATAGCCAGAGCTCTGAGAAAgtaagtttatttttgttttccagtttttgaaaatttgaaggaataaaatgatagggtttttaaaggaagtactggggggattggttctgcatgttttcaagtctatggacttgttaattaaaagcatattcctggatttttttattattctttttggcttttgtgattgtgtgcaata
tcagtagcagcttttgatttctgtctgcctaaatctcatttctttcacatgttttaacttttctggggctttctgctcagGGATGTGCATATGAATGTGCCCACAGCTCCTGAGTTAGGGTTGTTTCTGGACGAGAGCTTCTTCCCTGCTTACAACCAGAAATGGCAAGCTACGCACGAGGATATCTCTCTGAAAGAATT
TGAGCAGCAAATAATTGAGTTCAAACAGAAGTATATTTATACTCACATAGCATCCACTGAAGTTAAGGATGGAGTAGTAGCCGTTTGGTTGCATTCTCTCAATCATCGGAACTACGTTGAGTTTGCTGGTGAAAGGGAAGCAGAAAATGTTCAGAATGGGGCAGAATCTATTCCACCCAAGGCAAACATGGCTGACATGG
AAATGCTTGAAAGTTAACTCATACCAATGCAAATTAGGTATCTCATTTCATGGTTCCTGCATTTCGCTGCTGCTTCTTTTGCGAGAGAATTTCTTACCTGGAGAACCTGGTTTAAAAGTGGCCTATATTTTGAACTGAATTCCTGGTCACATCTTTGCAGCTCACCTTGCAAAGTAAGATGATGAGATTACAAACCTATG
TAAATTGGGGAGCGGAAAATTATAAGTTGATGTTGATTTTTGAAGAAAAGTATCATACGACACCTCTGAAGAGAGTGCTATTTTCTTTGACATTCTTTAGCCATGGATATTTTGACATCTACTGGTGCAACATTCACCAGCAAACCATTTTTTGATGAGTTCTACAAGATTTTGCTTTATATATACACATACACACCACA
CCTTAAGACCATGGCTTTCTAACATACAGGGGTTGCATGTGCAAAGTGATTGAACTGCTGGGAACATTTACTATATTTATGCATAAGAGTGCGGTACAGAATGTTCAATTGTTTTTTAATATGGAACTTATTGTATTTTAACTTTTTCACTTCAGATATGCC