sp|O22644|RL23A_FRIAG ----> Large ribosomal subunit protein uL23

Intron 1 GTTAGTCTCA ... TTGTATCTAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	14.89	140	36	13
A2	17.33	155	47	18
A3	14.78	199	39	30
A4	13.33	104	24	8
A5	19.07	87	29	12
A6	15.27	1870	446	228
A7	15.34	1429	379	139
A8	14.06	1531	323	178
A9	15.78	1494	411	149
A10	15.41	939	271	71

>TRINITY_DN37834_c0_g2_i2 from sample A8 / Example spliced isoform

AGGATATGTCTTTCCACATATCCGGATCCAGATCTGCCTGGGATACATCTCCGGTTTGGATGTGCTGCAGGATATGCTTGAGATCTCTTCCCATCTTGCTGGAAACGTCTAACCGATGCATCTTCTAAATAAGCCATTTTTTGGAAACACAAAAAACATAAAATAAAAAATAAAGAAAGCAAAGTGTGGAACTGGAGCCC
TAAAATCTGAACTTTATTTGTTGCCTATAAAATAACCACTCCCCTGCCCTAAGCCATTTTTTGGAAACACAGAAAAACATGAAATGAAAAATAAAAGGGCAATGTGTGGAGCCCTAAAACCTGAACTTTTGCCTGTAAAATAGCTCCTCCGCCATCGTAAACACACAAATCTGATTTTTTCATAACAATCTGCATTTCAG
AGTTTTTGAGAGCAATTTGGAGCAGAATATATCAAGAGACCTGAATCTTCTTTCTTTTTGGTTCATGGCTTTTTTTTTTCAATTGAATTAATCTTCATATGAATTCCTGTCAAACTCAGCCAACTTATACTTGGAGGCTCTAGTCCCACCTGGATTTGAACCTAGGTCATTAGAATGTTTATACCTCATCTCAACTTCAA
GTTTCAACCACTAAACGGAAACCATAGCCTGATGGACAGTTTCATGTGTTTTTCTAATGAAATAAAAATGTAGATAATATATATTCATATTTTTTATATGTCGTTTCCCTATATATTTGAATCCTGACATTTCAAAAAGTCTGGTGGATCTGGATCCCAATATGTTTCCATTGAACTTAATTTATCACATTATGTCCTCC
CTATATTATCGACATTGCTTACTTGTTATACTTCTTTACCTGTAACTTTGGCTTTAGGCACTGTGAAGAAGACCGATCCAAAGGGTCAGGCACAAAAGGCGGCCAAAGCGGTCAAGGCAGGTGCGTCTACTTTGAAGAGGAAGTCGAGAAAGATAAGAACATCTGTAGTATTTCACCGACCAAGGACGTTCAAGAGACCG
CGTAATCCTAAATATCCCCGAATCAGTGCACCCCCTAGGAACAAGCTTGACCAATATGAGGTGTTGAAGTACCCTTTGACAACTGAGTCTGCAATGAAGAAGATAGAGGACAACAATACCCTTGTCTTTATTGTTGATGTGCGGGCAGACAAGAAGAAGATAAAGGATGCAGTGAAGAAGATGTATGACATTCAAACAAA
GAAAGTGAACACTCTAATCAGGCCTGATGGGTTGAAGAAGGCATACGTGAGGCTGACACCAGATTATGATGCCTTGGATGTGGCAAACAAAATTGGCATCATCTAAACCATTGGATAAATGACTGTACTTGAATTTTTGTTTTAAGTATTCTCAAATTTAGGCTTCTCCTGTCTTTTTTTTGAAGCCATATTGTAGTTTG
AACTTTTGCAGGAATGTTGAGAGCTTGTTTTTCTTTTGATCGGTTTCACCAGGCATTCTTTGCCTTCTTTTTTGCTTTAAATTGCCTTATATGATCAGAAAATCCCAATTGGGTACTATGTACTGATTTGTTATTCAATATATTATTAGCACTTCAGCAGCTATATAGCTCAAGTTAGTGTCAAGTTATTCCTAGATTTC
TTATCTATTCTCATACAATGAGGTGTCAAAGGTTTTATTGTCTTGAGCTCTATATATCTGGTGAAATGGTTTCAGAGTTTAGTTCAAACATTTATCATTGGCCTGCATCGCTTTTACACCTACTTGATGAGCATACTATATTGTGTCTGGATACATTAGAACTAGACAGATTAGAGTCCATCGGTGCCATATTTTATGAC
AAAGCACACTCGGCATCCGCATTGTCACAGCTTGGATAGTTGATAACATCTGGCAAGAATTCTGATATGATGGCAAACGGACTTTATGCAAATTAAATTTGAAAATTTGGTTTTATGGTTGTCTTCACATTATTTGTTTTTCTTGTTATAAAAGTATTATCTTTGATGTCAAGGGCATGGTTTTTCTCGTTAAAAAATGC
CAGAACATCACAATATTTGCTGTTCTTTGAGCAAGATTTTGCCTTATTTGCTTCCCATCATCTGGTCAAGGACATTTTCTCCACGAAATTCAGAAACTTCTTATGATATGTTTTCAGGC

>TRINITY_DN37834_c0_g2_i3 from sample A8 / Example unspliced isoform:

AGGCACTGTGAAGAAGACCGATCCAAAGGGTCAGGCACAAAAGGCGGCCAAAGCGGTCAAGGCAGGTGCGTCTACTTTGAAGAGGAAGTCGAGAAAGATAAGAACATCTGTAGTATTTCACCGACCAAGGACGTTCAAGAGACCGCGTAATCCTAAATATCCCCGAATCAGTGCACCCCCTAGGAACAAGCTTGACCAAT
ATGAGGTGTTGAAGTACCCTTTGACAACTGAGTCTGCAATGAAGAAGATAGAGGACAACAATACCCTTGTCTTTATTGTTGATGTGCGGGCAGACAAGAAGAAGATAAAGGATGCAGTGAAGAAGATGTATGACATTCAAACAAAGAAAGTGAACACTCTAATCAGgttagtctcatagctttagagttagagctgaaga
ccatcataatttctttcaggattgaactttgaatgtgttggcaaaagaaacattttgatggttcagaattactttccgattcagataattgattgttatctcttgtatttgtatctagGCCTGATGGGTTGAAGAAGGCATACGTGAGGCTGACACCAGATTATGATGCCTTGGATGTGGCAAACAAAATTGGCATCATC
TAAACCATTGGATAAATGACTGTACTTGAATTTTTGTTTTAAGTATTCTCAAATTTAGGCTTCTCCTGTCTTTTTTTTGAAGCCATATTGTAGTTTGAACTTTTGCAGGAATGTTGAGAGCTTGTTTTTCTTTTGATCGGTTTCACCAGGCATTCTTTGCCTTCTTTTTTGCTTTAAATTGCCTTATATGATCAGAAAAT
CCCAATTGGGTACTATGTACTGATTTGTTATTCAATATATTATTAGCACTTCAGCAGCTATATAGCTCAAGTTAGTGTCAAGTTATTCCTAGATTTCTTATCTATTCTCATACAATGAGGTGTCAAAGGTTTTATTGTCTTGAGCTCTATATATCTGGTGAAATGGTTTCAGAGTTTAGTTCAAACATTTATCATTGGCC
TGCATCGCTTTTACACCTACTTGATGAGCATACTATATTGTGTCTGGATACATTAGAACTAGACAGATTAGAGTCCATCGGTGCCATATTTTATGACAAAGCACACTCGGCATCCGCATTGTCACAGCTTGGATAGTTGATAACATCTGGCAAGAATTCTGATATGATGGCAAACGGACTTTATGCAAATTAAATTTGAA
AATTTGGTTTTATGGTTGTCTTCACATTATTTGTTTTTCTTGTTATAAAAGTATTATCTTTGATGTCAAGGGCATGGTTTTTCTCGTTAAAAAATGCCAGAACATCACAATATTTGCTGTTCTTTGAGCAAGATTTTGCCTTATTTGCTTCCCATCATCTGGTCAAGGACATTTTCTCCACGAAATTCAGAAACTTCTTA
TGATATGTTTTCAGGC