sp|Q9SRH9|SNL1_ARATH ----> Paired amphipathic helix protein Sin3-like 1

Intron 1 GTATGTTATC ... TTTCCAACAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	26.69	85.1	27.2	28.8
A2	30.51	74.5	28.2	31.2
A3	21.15	97.6	21.4	26
A4	25.02	37.9	16.4	11.6
A5	33.16	28.8	14.4	13.6
A6	15.53	395.7	40.8	73.8
A7	14.32	1328.9	167.4	222
A8	15.19	1518.5	160.6	274.2
A9	14.38	1750	202.4	298.2
A10	13.53	1256	160.6	196.8

>TRINITY_DN127357_c1_g2_i3 from sample A1 / Example spliced isoform

GTTTTCTTTATCCTGAATAGGGCCGATTTTGTGTTTTCTTTATCGTGAATAGATTTTATGGCTGAGATGCCCCAGTGGTTTTCCATAATGTAGTATTCCGCTTCTCGCAATCTTTTTATGGCTGAGATGCCCCAATGGTGTGTTGGGTAGATTACTAGATTTCTGACAATTTTTTATTACTGGTGGACGGCCACAGACTG
CGTCGACCTTCCGATGGATCAAAGAGGCTAACGATTGGTGAAGCTTTGGGATACATCAAGGAAGTCAAAGAGGAATTCAAGAATACTCAAGAGAAATATGACGAGTTTCTTGCGGTCATCAAAGCTTTACAGGCCCAAAGGCTTGATAGAGCTGATGTTGTAGCCCGACTGAGATATTTATTTAAGGGCCACCAATCTCT
AGTTTTGGGTTTGAATACTTTCCTGCCCAAAGATTATGAAATTGCATTTCCTGCCGCGGAGAACCCAGAAGAGCAAGAGCTAAACCATAACGAAGCCAACAAGTTTTTTAACAAGATCAAGACACGGGTTAAAGACGCAACAGAATTCAAGACTTTTTTGCGTTTACTGGATGAGCATCAGATGGGAAGCAAGTCTTTGG
GTGAATTTTATTCAGAGGTGGAAGAACTGTTTAATTATCAGACCGATATAGTAGAGGAATTTAGAGACAGTCTACCTTCTGAAACCTCATTCCCAAACCCCATTTCCAATGTGTCAGCTTTGGCGGGACCATTTTCTGGACGCATCGTTGGAATAACTTCCGTTGGGCATTCACAGTTAGAAAACGTGTTGAAGAAAGAA

AAACCAGTTACCTCACAGAATAATTTGGTTCAGAGCATCATTGTTATTGGTAATGAAAAATGGAAATATAAAGGGATCAAGAATGAACACGGGATTAAGGTTGAGAAGGAAGGAAATGATCGAAAAAGAAAACTAGGAGTGAAAGGAGAAACGGAAAATAAAAACGCATAGTATAGATAGAGAATTGGATGTCATATATT
TAATTTTTCTACTATAAAATTATGTTATGTTTTCTCACTCAGTTTGGAAAGAGTGTTATGTTTTCTCACTCAGTTTGGAAAGATGGTAGTTGTGATTGTTACCCTCTATGGATATGACATTGATTTATAATAAATGGAAACATAATTGGAATGTTGAAATTTTACTTCTATATTTAATAACTCTCTATCACTGAG

>TRINITY_DN127357_c1_g2_i8 from sample A1 / Example unspliced isoform:

CGTAACTAGAGCTAAATCTGATTTATCTTTCATGTTTCTTCATTATTTATTTTTCCTTTATTTTCTTCAGCTTACAGATCTCAACAATGAGCATGGGCGGAAGACAGCGGCGAGCAGTCGTAACTAGAGCTAAATCTGATTTATCTTTCATGTTTCTTCATTATTTATTTTTCCTTTATTTTCTTCAGCTTACGGATCTC
AACAATGAGTATGCGCGGAAGACAGCGACGAGCAGGACTGCGTCGACCTTCCGATGGATCAAAGAGGCTAACGATTGGTGAAGCTTTGGGATACATCAAGGAAGTCAAAGAGGAATTCAAGAATACTCAAGAGAAATATGACGAGTTTCTTGCGGTCATCAAAGCTTTACAGGCCCAAAGGCTTGATAGAGCTGATGTTG
TAGCCCGACTGAGATATTTATTTAAGGGCCACCAATCTCTAGTTTTGGGTTTGAATACTTTCCTGCCCAAAGATTATGAAATTGCATTTCCTGCCGCGGAGAACCCAGAAGAGCAAGAGCTAAACCATAACGAAGCCAACAAGTTTTTTAACAAGATCAAGACACGGGTTAAAGACGCAACAGAATTCAAGACTTTTTTG
CGTTTACTGGATGAGCATCAGATGGGAAGCAAGTCTTTGGGTGAATTTTATTCAGAGGTGGAAGAACTGTTTAATTATCAGACCGATATAGTAGAGGAATTTAGAGACAGTCTACCTTCTGAAACCTCATTCCCAAACCCCATTTCCAATGTGTCAGCTTTGGCGGGACCATTTTCTGGACGCATCGTTGGAATAACTTC
CGTTGGGCATTCACAGTTAGAAAACGTGTTGAAGgtatgttatcatgttctttatgcttaattgctttgtgttaattacaaattatgtaggtttcttatattggctgacctcacatctctttggttttccaacagAAAGAAAAACCAGTTACCTCACAGAATAATTTGGTTCAGAGCATCATTGTTATTGGTAATGAAAA
ATGGAAATATAAAGGGATCAAGAATGAACACGGGATTAAGGTTGAGAAGGAAGGAAATGATCGAAAAAGAAAACTAGGAGTGAAAGGAGAAACGGAAAATAAAAACGCATAGTATAGATAGAGAATTGGATGTCATATATTTAATTTTTCTACTATAAAATTATGTTATGTTTTCTCACTCAGTTTGGAAAGAGTGTTAT
GTTTTCTCACTCAGTTTGGAAAGATGGTAGTTGTGATTGTTACCCTCTATGGATATGACATTGATTTATAATAAATGGAAACATAATTGGAATGTTGAAATTTTACTTCTATATTTAATAACTCTCTATCACTGAG

Intron 2 GTAATTTTCA ... GTATTTGCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	11.11	88	11	0
A2	17.65	56	12	2
A3	16.83	84	17	1
A4	8.86	72	7	2
A5	10	18	2	0
A6	8.03	275	24	0
A7	8.02	917	80	0
A8	7.19	890	69	0
A9	9.44	1094	114	2
A10	7.89	957	82	0

>TRINITY_DN118505_c0_g2_i7 from sample A2 / Example spliced isoform

GTTAGTCTGAACGGAATTTCATTTGCAGGACCGATTTTGTGTATTCTTTATCATGAATAGGCCCGATTTTGTACTGCGTCGAAAGAGGCTAACGCTGAGTGAAGCTTTGGGATATGTCAAGGAAGTCAAAGAGGAATTCAAGAATACTCCAGAGAAATATGACCAGTTTCTTGCGGTCATCAAAGCTTTACAGGCCCAAA
GGCTTGATAGAACTGATGTTGTAGCTCGACTGAGATGTTTATTTAAGGGACACCAATCTCTAGTTTTGGGTTTGGATAATTTCCTGCCCAAAGATTATGAAATTGCATTTCCTGCCGCGGAGAACCCAGAAGAGCAAGAGCTAAACCATAACGAAGCCGACAAGTTTTTTAACAAGATCAAGACACGGGCTAAAGACGCA
ACAGAATTCGAGACTTTTTTGCGTTTACTGGATGAATATAAGATTGGAAGCAAGTCTTTGTGTGAATTTTATCTAGAGTTGGAAGAACTGTTTAATTATCAGCCCGATCTATTAGAGGAATTTAGAGACCTTCTACCTTCTGAAACCCCATTCCTAAACCCCATTTCCAATGTGTCAGCTTTGGCGGGACCATTTTCTGG
ACGCATCGTTGGAATAACTTCCGTTGGGCATTCACAGTTAGAAAACGTGTTGAAGGTATGTTATCATGTTCTTTATGCTTAATTGCTTTGTGTTAATTACAAATTATGTAGGTTTCTTATATTGGCTGACCTCACATCTCTTTGGTTTTCCAACAGAAAGAAAAACCAGTTACCTCACAGAATAATTTGGTTCAGAGCAT
CATTGTTATTGGTAATGAAAAATGGAAATATAAAGGGATCAAGAATGAACACGGGATTAAAAAGGAGGGAAATGATCGAAAAGAAAACTAGGAGTGAAAGGAGAAACGGAACATAAAAGCGCATAGTACAGATAGAGAATTGGATGTCATATATTTAATTTTTCTACTCTTAAAAAGGAGGGAAATGATCGAAAAGAAAA
CTAGGAGTGAAAGGAGAAACGGAACATAAAAGCGCATAG

>TRINITY_DN118505_c0_g2_i13 from sample A2 / Example unspliced isoform:

GTTAGTCTGAACGGAATTTCATTTGCAGGACCGATTTTGTGTATTCTTTATCATGAATAGGCCCGATTTTGTACTGCGTCGAAAGAGGCTAACGCTGAGTGAAGCTTTGGGATATGTCAAGGAAGTCAAAGAGGAATTCAAGAATACTCCAGAGAAATATGACCAGTTTCTTGCGGTCATCAAAGCTTTACAGGCCCAAA
GGCTTGATAGAACTGATGTTGTAGCTCGACTGAGATGTTTATTTAAGGGACACCAATCTCTAGTTTTGGGTTTGGATAATTTCCTGCCCAAAGATTATGAAATTGCATTTCCTGCCGCGGAGAACCCAGAAGAGCAAGAGCTAAACCATAACGAAGCCGACAAGTTTTTTAACAAGATCAAGACACGGGCTAAAGACGCA
ACAGAATTCGAGACTTTTTTGCGTTTACTGGATGAATATAAGATTGGAAGCAAGTCTTTGTGTGAATTTTATCTAGAGgtaattttcattgttttacaaaaatgggaatacaaatgtttatattattttcattctccattatcttcagcttatacgctattcatttatatttgtatttgcagTTGGAAGAAC

Intron 3 GTATTGCATA ... TCATTTTCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	25	99	33	6
A2	30	77	33	4
A3	21.93	89	25	4
A4	33.63	75	38	2
A5	30.77	9	4	0
A6	27.99	211	82	7
A7	25.51	879	301	2
A8	21.89	671	188	5
A9	24.86	1037	343	12
A10	23.93	839	264	1

>TRINITY_DN118505_c0_g2_i2 from sample A2 / Example spliced isoform

CTAATAACTAAATTATAAATACCAACCTTCCACATACAATGTAATGTAGATAAGCGTAACTAGAGCTAAATCTGATTTATCTTTCATGTTTTTTCATTATTTATTTTTCCTTTATTTTCTTCAGCTTACAGCTAATAACTAAATTATAAATACCAACCTTCCACATACAATGTAATGTAGATAAGCGTAACTAGAGCTAA
ATCTGATTTATCTTTCATGTTTTTTCATTATTTATTTTTCCTTTATTTTCTTCAGCTTACGGATCTCAACAATGAGTATGCGCGGAAGACAGCGACGAGCAGGACTGCGTCGACCTTCCGATGGATCAAAGAGGCTAACGATTGGTGAAGCTTTGGGATACATCAAGGAAGTCAAAGAGGAATTCAAGAATACTCAAGAG
AAATATGACGAGTTTCTTGCGGTCATCAAAGCTTTACAGGCCCAAAGGCTTGATAGAGCTGATGTTGTAGCCCGACTGAGATATTTATTTAAGGGACACCAATCTCTAGTTTTGGGTTTGAATACTTTCCTGCCCAAAGATTATGAAATTGCATTTCCTGCCGCGGAGAACCCAGAAGAGCAAGAGCTAAACCATAACGA
AGCCGACAAGTTTTTTAACAAGATCAAGACACGGGTTAAAGACGCAACAGAATTCAAGACTTTTTTGCGTTTACTGGATGAGCATCAGATGGGAAGCAAGTCTTTGGGTGAATTTTATTCAGAGGTGGAAGAACTGTTTAATTATCAGACCGATATAGTAGAGGAATTTAGAGACAGTCTACCTTCTGAAACCTCATTCC
CAAACCCCATTTCCAATGTGTCAGCTTTGGCGGGACCATTTTCTGGACGCATCGTTGGAATAACTTCCGTTGGGCATTCACAGTTAGAAAACGTGTTGAAGGTATGTTATCATGTTCTTTATGCTTAATTGCTTTGTGTTAATTACAAATTATGTAGGTTTCTTATATTGGCTGACCTCACATCTCTTTGGTTTTCCAAC
AGAAAGAAAAACCAGTTACCTCACAGAATAATTTGGTTCAGAGCATCATTGTTATTGGTAATGAAAAATGGAAATATAAAGGGATCAAGAATGAACACGGGATTAAAAAGGAGGGAAATGATCGAAAAGAAAACTAGGAGTGAAAGGAGAAACGGAACATAAAAGCGCATAGTACAGATAGAGAATTGGATGTCATATAT
TTAATTTTTCTACTCTTAAATTATGTTATGTTTTCTCACTAAGTTTGGAAACATGATAGTTGTGATTGTTTCCCTCTACGGATATGACATTGATTTTAATAAATGGAAACATAATTGGAATGTTGAAAAAA

>TRINITY_DN118505_c0_g2_i11 from sample A2 / Example unspliced isoform:

CTAATAACTAAATTATAAATACCAACCTTCCACATACAATGTAATGTAGATAAGCGTAACTAGAGCTAAATCTGATTTATCTTTCATGTTTTTTCATTATTTATTTTTCCTTTATTTTCTTCAGCTTACAGCTAATAACTAAATTATAAATACCAACCTTCCACATACAATGTAATGTAGATAAGCGTAACTAGAGCTAA
ATCTGATTTATCTTTCATGTTTTTTCATTATTTATTTTTCCTTTATTTTCTTCAGCTTACGGATCTCAACAATGAGTATGCGCGGAAGACAGCGACGAGCAGGACTGCGTCGACCTTCCGATGGATCAAAGAGGCTAACGATTGGTGAAGCTTTGGGATACATCAAGGAAGTCAAAGAGGAATTCAAGAATACTCAAGAG
AAATATGACGAGTTTCTTGCGGTCATCAAAGCTTTACAGGCCCAAAGGCTTGATAGAGCTGATGTTGTAGCCCGACTGAGATATTTATTTAAGGGACACCAATCTCTAGTTTTGGGTTTGAATACTTTCCTGCCCAAAGATTATGAAATTGCATTTCCTGCCGCGGAGAACCCAGAAGAGCAAGAGCTAAACCATAACGA
AGCCGACAAGTTTTTTAACAAGATCAAGgtattgcatatggcatattaatgcttcaacatttgaaagttatgttctatttaagacttgggtaggccattgatagtttgaaattcaaagctatcttgcttaagaatcttttcactttacttctaatttatcattttcagagacgacgctttaacatttgaaagctatgttc
tatttaagacttgggtaggccattgatagtttgaaattcaaagctatcttgtttgtttaagactcttttcactttacttgtaatttatcattttcagACACGGGTTAAAGACGCACTAAAGACGCAACAGAATTCGACAGAATTCAAGACTTTTTTGCGTTTACTGGATGAGCATCAGATGGGAAGCAAGTCTTTGGGTG
AATTTTATTCAGAGGTAATTTTCATTGTTTTACAAAAATGGGAATACAAATGTTTATATTATTTTCATTCTCCAATATTATCTTCAGCTTATACGCTATTCATTTATATTTGTATTTGCAGTTGGAAGAAC

Intron 4 GTATGTTATC ... CTGACTTCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	73.58	7	14	25
A2	93.33	1	13	15
A3	100	0	9	11
A4	100	0	8	7
A5	100	0	7	8
A6	55.56	16	10	30
A7	68.42	24	37	67
A8	59.06	35	26	75
A9	64.37	31	38	74
A10	68.18	21	27	63

>TRINITY_DN44949_c0_g4_i16 from sample A6 / Example spliced isoform

CACAGTTAGAAAACGTGTTAAAGTTCTCTTCGGTTTTCCAGCAGAAAGAAAAACCAGTTACGTCACAAAATAATTTGGTTCAGAGCATCATTGTTATTGGTAATGAAGAATGGAAGTATAAAGGGATAAAGAATGAACACGGGAATAAGGCTGAAAAGAAAGGAAATGATCGAGAAAAAAAACTAGGAGTAAAAGGAGAA
ACAGAAACAATTTAAAAGCACATAGTAGAGAGAGTGAATTAGATGTCATATATCTATTTTTCTGCTATAAAATTATGTTTTTCCATTAAGTTTGGTAAGTTTGGAACCATGACAGTTGTGATTGTTTCCCTTTATGGATATGACATTGATTATAAAATTATGTTTTTTAGTAAGTTTGGAACCATGATAGTTGTGATTGT
TTTACTCTATGGATATGACATTGATTTGATAATGAATGGAAGAATTTTTTTACTTCACACCTAATAACTCTCTATAGAATTTCATTGAGGC

>TRINITY_DN44949_c0_g4_i15 from sample A6 / Example unspliced isoform:

ATGAAATCCCATTCCCAAACCTCATTCCCAATGTGCCAGCTTCCGCGGGACCATTTTCTGGACGCATCATTGGAGTAAGTTCAGTTGGGCATTCACAGTTAGAAAACGTGTTAAAGgtatgttatcatgttctttatgcttaattgctttgtgttaattacaaattatgtaggtttcttatattggctgacttcagTTCT
CTTCGGTTTTCCAGCAGAAAGAAAAACCAGTTACGTCACAAAATAATTTGGTTCAGAGCATCATTGTTATTGGTAATGAAGAATGGAAGTATAAAGGGATAAAGAATGAACACGGGAATAAGGCTGAAAAGAAAGGAAATGATCGAGAAAAAAAACTAGGAGTAAAAGGAGAAACAGAAACAATTTAAAAGCACATAGTA
GAGAGAGTGAATTAGATGTCATATATCTATTTTTCTGCTATAAAATTATGTTTTTCCATTAAGTTTGGTAAGTTTGGAACCATGACAGTTGTGATTGTTTCCCTTTATGGATATGACATTGATTATAAAATTATGTTTTTTAGTAAGTTTGGAACCATGATAGTTGTGATTGTTTTACTCTATGGATATGACATTGATTT
GATAATGAATGGAAGAATTTTTTTACTTCACACCTAATAACTCTCTATAGAATTTCATTGAGGC

Intron 5 GTATTGCATA ... TCATTTTCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	27.56	46	15	20
A2	29.73	39	11	22
A3	27.52	54	23	18
A4	26.39	53	22	16
A5	25	21	11	3
A6	21.37	138	46	29
A7	19.86	444	142	78
A8	19.63	430	124	86
A9	19.5	520	154	98
A10	21.87	409	138	91

>TRINITY_DN48027_c0_g1_i3 from sample A10 / Example spliced isoform

TAACTAGACCTAAATCTGATTTATCTTTCATGTATTTTCATTATATTTTTCCTTTATTTTCTTCAGCTTACAGGTCGCAACAATGAGCATGCGCGGAAGACAGAGACGAGCAGGACTGTTTCGACCTTCTGATGGATCAAAGAGGCTAACGATGGGAGAAGCTTTGGGATATGTCAAGGAACTCAAAGAGGAATTCAAGA
ATAGTCAAGAGAAATATGACGAGTTTCTTGCGGTCATCAAAGCTTTACAGGCCCAAAGGCTTGATAGAGCTGATGTTGTAGCCCGACTGAGATATTTATTTAAGGGACACCAATCTCCAGTTTTGGGTTTGAATACTTTCCTGCCCAAAGATTATGAAATTGCATTTGCCCCATTGGAGAATTCAGAAGCGGCCGAGTTT
GACGAAACCATCAACTTTACTAACAAGATCCACAGACGAGTTAAAGACGCAACAGAATTCAAGACGTTTTTGCGTATCCTGAAGGAGTATAAGATGGGAAGCAAGTCTTTGCGTGAATTTTATCTAGAGGTGGAAGAACTGTTTAATTATCAGCCCGATCTATTAGAGGAATTTAGAGACCTTCTACCTTCTGAAATCCC
ATTCCCAAACCCTATTCCCAATGTGTCAGCTTCGGCGGGACCATTTTCGGGACGCATCATTGGAGTAACTTGCGTTGGGCATTTCCAGTTAGAAAACGTGCTAAAGAATGAAAAACCAGTTGCTTCACAGAATAATTTGGTTCAGAGCATCATTGTTATTGTTAATGAAAAATGGAAATATAAAGGGATCAAGAATGAAC
ACGGGATTAAGGTTGAGAAGGAAGGAAATGATCGAAAAACGGAACATAAAAGCGCATAGTACAGATAGAGAATCGGATGTCATATATTTAATTTTTCTACTATAAAATTATGTTATGTTTTCTCACTCAGTTT

>TRINITY_DN48027_c0_g1_i11 from sample A10 / Example unspliced isoform:

TAACTAGACCTAAATCTGATTTATCTTTCATGTATTTTCATTATATTTTTCCTTTATTTTCTTCAGCTTACAGGTCGCAACAATGAGCATGCGCGGAAGACAGAGACGAGCAGGACTGTTTCGACCTTCTGATGGATCAAAGAGGCTAACGATGGGAGAAGCTTTGGGATATGTCAAGGAACTCAAAGAGGAATTCAAGA
ATAGTCAAGAGAAATATGACGAGTTTCTTGCGGTCATCAAAGCTTTACAGGCCCAAAGGCTTGATAGAGCTGATGTTGTAGCCCGACTGAGATATTTATTTAAGGGACACCAATCTCCAGTTTTGGGTTTGAATACTTTCCTGCCCAAAGATTATGAAATTGCATTTGCCCCATTGGAGAATTCAGAAGCGGCCGAGTTT
GACGAAACCATCAACTTTACTAACAAGATCCACgtattgcatatggcatattaatgcttcaacatttgaaagttatgttctatttaagacttgggtaggccattgatagtttgaaattcaaagctatcttgcttaagaatcttttcactttacttctaatttatcattttcagAGACGAGTTAAAGACGCAACAGAATTC
AAGACGTTTTTGCGTATCCTGAAGGAGTATAAGATGGGAAGCAAGTCTTTGCGTGAATTTTATCTAGAGGTGGAAGAACTGTTTAATTATCAGCCCGATCTATTAGAGGAATTTAGAGACCTTCTACCTTCTGAAATCCCATTCCCAAACCCTATTCCCAATGTGTCAGCTTCGGCGGGACCATTTTCGGGACGCATCAT
TGGAGTAACTTGCGTTGGGCATTTCCAGTTAGAAAACGTGCTAAAGAATGAAAAACCAGTTGCTTCACAGAATAATTTGGTTCAGAGCATCATTGTTATTGTTAATGAAAAATGGAAATATAAAGGGATCAAGAATGAACACGGGATTAAGGTTGAGAAGGAAGGAAATGATCGAAAAACGGAACATAAAAGCGCATAGT
ACAGATAGAGAATCGGATGTCATATATTTAATTTTTCTACTATAAAATTATGTTATGTTTTCTCACTCAGTTT

Intron 6 GTAGGCCATT ... TCATTTTCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	80	5	5	20
A2	66.67	11.3	10	22.7
A3	54.99	15	9	18.3
A4	55.17	13	10	16
A5	42.86	4	4	3
A6	64.39	17.3	13	31.3
A7	52.3	72.7	20	79.7
A8	56.74	72.3	25	95
A9	52.83	99.3	37	111.7
A10	57.2	72.3	20	96.7

>TRINITY_DN48777_c1_g1_i6 from sample A7 / Example spliced isoform

AATGTAGATAAGCGTAACTAGACCTAAAGCTGATTTATCTTTCATGTATTTTCATTATATTTTTCCTTTATTTTCTTCAGCTTACAGGTCGCAACAATGAGCATGCGCGGAAGACAGAGACGAGCAGGACTGTTTCGACCTTCTGATGGATCAAAGAGGCTAACGATGGGAGAAGCTTTGGGATATGTCAAGGAACTCAA
AGAGGAATTCAAGAATAGTCCAGAGAAATATGACCAGTTTCTTGCGGTCATCAAAGCTTTACAGGCCCAAAGGCTTGATAGAGCTGATGTTGTAGCCCGACTGAGATATTTATTTAAGGGACACCATTCTCCAGTTTTGGGTTTGAATACTTTCCTGCCCAAAGATTATGAAATTGCATTTGCCCCATTGGAGAATTCAG
AAGCGGCCGAGTTTGACGAAACCATCAACTTTACTAACAAGATCCACGTATTGCATATGGCATATTAATGCTTCAACATTTGAAAGTTATGTTCTATTTAAGACTTGGAGACGAGTTAAAGACGCAACAGAATTCAAGACGTTTTTGCGTATCCTGAAGGAGTATAAGATGGGAAGCAAGTCTTTGCGTGAATTTTATCT
AGAGGTGGAAGAACTGTTTAATTATCAGCCCGATATAGTAGAGGAATTTAGAGAC

>TRINITY_DN48777_c1_g1_i3 from sample A7 / Example unspliced isoform:

AATGTAGATAAGCGTAACTAGACCTAAAGCTGATTTATCTTTCATGTATTTTCATTATATTTTTCCTTTATTTTCTTCAGCTTACAGGTCGCAACAATGAGCATGCGCGGAAGACAGAGACGAGCAGGACTGTTTCGACCTTCTGATGGATCAAAGAGGCTAACGATGGGAGAAGCTTTGGGATATGTCAAGGAACTCAA
AGAGGAATTCAAGAATAGTCCAGAGAAATATGACCAGTTTCTTGCGGTCATCAAAGCTTTACAGGCCCAAAGGCTTGATAGAGCTGATGTTGTAGCCCGACTGAGATATTTATTTAAGGGACACCAATCTCCAGTTTTGGGTTTGAATACTTTCCTGCCCAAAGATTATGAAATTGCATTTGCCCCATTGGAGAATTCAG
AAGCGGCCGAGTTTGACGAAACCATCAACTTTACTAACAAGATCCACGTATTGCATATGGCATATTAATGCTTCAACATTTGAAAGTTATGTTCTATTTAAGACTTGGgtaggccattgatagtttgaaattcaaagctatcttgcttaagaatcttttcactttacttctaatttatcattttcagAGACGAGTTAAAG
ACGCAACAGAATTCAAGACGTTTTTGCGTATCCTGAAGGAGTATAAGATGGGAAGCAAGTCTTTGCGTGAATTTTATCTAGAGGTGGAAGAACTGTTTAATTATCAGCCCGATATAGTAGAGGAATTTAGAGAC