sp|Q38967|AAP2_ARATH ----> Amino acid permease 2
Intron 1 GTAAGTGTTA ... TTGTGTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 36.84 | 6 | 4 | 3 |
| A2 | 18.18 | 9 | 4 | 0 |
| A3 | 27.27 | 4 | 3 | 0 |
| A4 | 9.09 | 10 | 2 | 0 |
| A5 | 33.33 | 2 | 2 | 0 |
| A6 | 11.11 | 4 | 1 | 0 |
| A7 | 0 | 1 | 0 | 0 |
| A8 | -1 | 0 | 0 | 0 |
| A9 | 15.79 | 8 | 0 | 3 |
| A10 | 21.43 | 11 | 4 | 2 |
>TRINITY_DN94624_c0_g1_i1 from sample A1 / Example spliced isoformCATGGATCCAGAGGCCCCTCAAACTTCGTTTCCAGTAGAGTTCTCTGGGACAAACATTTGCAGAGACGAGGTGCATCAGTCGAGCGAGACTTGGAATAACTCTGATTTGAAGAGTTTATTAGATGATGATGGCCGCCCTGCACGCAAAGGTACCATGTGGACTGCAAGCGCTCATATTATAACGGCAGTGATAGGTTCAG
GAGTGCTATCGCTTGCATGGGCGATTTCTCAATTAGGATGGATAGCTGGACCTGGAGCTTTACTTGTTTTCTCTCTCATAACGCTCTATACTTCTAGTTTGCTGGCCGACTGTTACAGATATCCTGATCCAGTCAAAGGGAAAAGAAACTACACTTACATAGATGCCGTTAAAGCAAATTTAGGAGGCATGCAAATTTGG
CTTTGTGGTCTTACACAGTATAGCATTTTATATGGCACTGCAATTGGCTACACGATCACTGCATCTATGAGTATGACGGCAATAACGCGGTCCAATTGTTTCCATGAAAATGGGAAGCAAGCTCCCTGCCACACTTCCGAAAATCCATATATGATTGTGTTCGGAATATTTCAAATTTTGCTATCTCAAATACCTGACTT
CGACAGAATCTGGTGGCTTTCAATAGTAGCTGCAGTTATGTCGTTTGGGTATTCATCAATCGGACTTGGCCTTGCTCTTGCAAAAGTTGCAGGCATGCCCTTACTCTAATTGTCTTGAGTTTCACTTTTCTGTTGCTCTTCCATTAAATATTATCCTCTTCATGAGCGAACAAAAATAGATAATTTCATCTGTTGCTAGA
GGCTTCCACAGTGTGTCATTATGTTTGAGAAGGCTTTCGGATTCACTGTGTCTGTGTCATAGAATTTTTTTTATCTTTGGGATCAGTCACAAGCAGTCCATCATATTCAGGATAAAGGAAATATATAGCAATGAAAAGCAAGCTAGTGAAGACGCAATCGAAGGCTTG
>TRINITY_DN94624_c0_g1_i4 from sample A1 / Example unspliced isoform:CATGGATCCAGAGGCCCCTCAAACTTCGTTTCCAGTAGAGTTCTCTGGGACAAACATTTGCAGAGACGAGGTGCATCAGTCGAGCGAGACTTGGAATAACTCTGATTTGAAGAGTTTATTAGATGATGATGGCCGCCCTGCACGCAAAGgtaagtgttatgatttctatctatgcaatttttattctgcaaaagtttaac
ctaatatggtaattagtaacaataacattaataatattaatatgtccagatagaccaaagacaatgttctgaaggctgaacttcaagatttttacagctttgaatggattgtgtgcagGTACCATGTGGACTGCAAGCGCTCATATTATAACGGCAGTGATAGGTTCAGGAGTGCTATCGCTTGCATGGGCGATTTCTCA
ATTAGGATGGATAGCTGGACCTGGAGCTTTACTTGTTTTCTCTCTCATAACGCTCTATACTTCTAGTTTGCTGGCCGACTGTTACAGATATCCTGATCCAGTCAAAGGGAAAAGAAACTACACTTACATAGATGCCGTTAAAGCAAATTTAGGAGGCATGCAAATTTGGCTTTGTGGTCTTACACAGTATAGCATTTTAT
ATGGCACTGCAATTGGCTACACGATCACTGCATCTATGAGTATGACGGCAATAACGCGGTCCAATTGTTTCCATGAAAATGGGAAGCAAGCTCCCTGCCACACTTCCGAAAATCCATATATGATTGTGTTCGGAATATTTCAAATTTTGCTATCTCAAATACCTGACTTCGACAGAATCTGGTGGCTTTCAATAGTAGCT
GCAGTTATGTCGTTTGGGTATTCATCAATCGGACTTGGCCTTGCTCTTGCAAAAGTTGCAGGCATGCCCTTACTCTAATTGTCTTGAGTTTCACTTTTCTGTTGCTCTTCCATTAAATATTATCCTCTTCATGAGCGAACAAAAATAGATAATTTCATCTGTTGCTAGAGGCTTCCACAGTGTGTCATTATGTTTGAGAA
GGCTTTCGGATTCACTGTGTCTGTGTCATAGAATTTTTTTTATCTTTGGGATCAGTCACAAGCAGTCCATCATATTCAGGATAAAGGAAATATATAGCAATGAAAAGCAAGCTAGTGAAGACGCAATCGAAGGCTTG
Intron 2 GTACACCACA ... AATTTTGAAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 52.94 | 4 | 3 | 6 |
| A2 | 65.71 | 6 | 8 | 15 |
| A3 | 14.29 | 3 | 0 | 1 |
| A4 | 40 | 6 | 2 | 6 |
| A5 | 100 | 0 | 0 | 2 |
| A6 | 9.09 | 5 | 1 | 0 |
| A7 | 33.33 | 6 | 6 | 0 |
| A8 | -1 | 0 | 0 | 0 |
| A9 | 26.32 | 7 | 2 | 3 |
| A10 | 14.29 | 6 | 2 | 0 |
>TRINITY_DN98485_c0_g1_i1 from sample A2 / Example spliced isoformGTTCTCTGGGACAAACATTTGCAGAGACGAGGTGCATCAGTCGAGCGAGACTTGGAATAACTCTGATTTGAAGAGTTTATTAGATGATGATGGCCGCCCTGCACGCAAAGGTACCATGTGGACTGCAAGCGCTCATATTATAACGGCAGTGATAGGTTCAGGAGTGCTATCGCTTGCATGGGCGATTTCTCAATTAGGAT
GGATAGCTGGACCTGGAGCTTTACTTGTTTTCTCTCTCATAACGCTCTATACTTCTAGTTTGCTGGCCGACTGTTACAGATATCCTGATCCAGTCAAAGGAAAAAGAAACTACACTTACATAGATGCCGTTAAAGCAAATTTAGGAGGCATGCAAATTTGGCTTTGTGGTCTTACACAGTATAGCATTTTATATGGCACT
GCAATTGGCTACACGATCACTGCATCTATGAGTATGACGGCAATAACGCGGTCCAATTGTTTCCATGAAAATGGGAAGCAAGCTCCCTGCCACACTTCCGAAAATCCATATATGATTGTGTTCGGAATATTTCAAATTTTGCTATCTCAAATACCTGACTTCGACAGAATCTGGTGGCTTTCAATAGTAGCTGCAGTTAT
GTCGTTTGGGTATTCATCAATCGGACTTGGCCTTGCTCTTGCAAAAGTTGCAGGAGGACACTTCCATGGAAGCGTTACTGGAGTAACAGTTGGTACAGTTACTGCTGCTGAAAAAACATGGGGGACGTTTCGAGCTTTAGGAAATATTGCATTTGCTTATTCATTTTCCATGCTTCTGATCGAGATCCAGGACACAATAA
AATCACCTCCAGCGGAGAATAAAACCATGAAGAAGGCCACCCTGATAGGTATCAGCATTACAACTACTTACTACATGCTATGCGGTTGCCTAGGGTACGCAGCCTTCGGTAATAGATCGCCCGGGAATCTTTTGACTGGTTTTGGGTTTTACAACCCTTTCTGGCTGGTCGACTTGGCAAATGTGTTCATAGTTGTTCAC
CTGGTTGGAGCATATCAAGTTTTTGTTCAACCCCTGTTTGCGTTCATCGAGCATTGGTCATCCCACAGATGGCCAAAAAAACAAGTTTATTCACATGGAATACAATCTCAACATACCTCGATACGGCCTGTGTAAGATCAATCTTTTCAAATTGGTATGGAGAACATGCTTTGTGATGACAACCACCATTATTTCCA
>TRINITY_DN98485_c0_g1_i2 from sample A2 / Example unspliced isoform:GTTCTCTGGGACAAACATTTGCAGAGACGAGGTGCATCAGTCGAGCGAGACTTGGAATAACTCTGATTTGAAGAGTTTATTAGATGATGATGGCCGCCCTGCACGCAAAGGTACCATGTGGACTGCAAGCGCTCATATTATAACGGCAGTGATAGGTTCAGGAGTGCTATCGCTTGCATGGGCGATTTCTCAATTAGGAT
GGATAGCTGGACCTGGAGCTTTACTTGTTTTCTCTCTCATAACGCTCTATACTTCTAGTTTGCTGGCCGACTGTTACAGATATCCTGATCCAGTCAAAGGAAAAAGAAACTACACTTACATAGATGCCGTTAAAGCAAATTTAGGAGGCATGCAAATTTGGCTTTGTGGTCTTACACAGTATAGCATTTTATATGGCACT
GCAATTGGCTACACGATCACTGCATCTATGAGTATGACGGCAATAACGCGGTCCAATTGTTTCCATGAAAATGGGAAGCAAGCTCCCTGCCACACTTCCGAAAATCCATATATGATTGTGTTCGGAATATTTCAAATTTTGCTATCTCAAATACCTGACTTCGACAGAATCTGGTGGCTTTCAATAGTAGCTGCAGTTAT
GTCGTTTGGGTATTCATCAATCGGACTTGGCCTTGCTCTTGCAAAAGTTGCAGGAGGACACTTCCATGGAAGCGTTACTGGAGTAACAGTTGGTACAGTTACTGCTGCTGAAAAAACATGGGGGACGTTTCGAGCTTTAGGAAATATTGCATTTGCTTATTCATTTTCCATGCTTCTGATCGAGATCCAGgtacaccaca
ttttagctgagatattttggtagtgtatggaagatattattttgccttgcaattgcctaattaacaattttggccctaaaattttgaagGACACAATAAAATCACCTCCAGCGGAGAATAAAACCATGAAGAAGGCCACCCTGATAGGTATCAGCATTACAACTACTTACTACATGCTATGCGGTTGCCTAGGGTACGCA
GCCTTCGGTAATAGATCGCCCGGGAATCTTTTGACTGGTTTTGGGTTTTACAACCCTTTCTGGCTGGTCGACTTGGCAAATGTGTTCATAGTTGTTCACCTGGTTGGAGCATATCAAGTTTTTGTTCAACCCCTGTTTGCGTTCATCGAGCATTGGTCATCCCACAGATGGCCAAAAAAACAAGTTTATTCACATGGAAT
ACAATCTCAACATACCTCGATACGGCCTGTGTAAGATCAATCTTTTCAAATTGGTATGGAGAACATGCTTTGTGATGACAACCACCATTATTTCCA