sp|Q71DJ5|LIP1_ARATH ----> Triacylglycerol lipase 1

Intron 1 GTGGCTCTAA ... TGAATAACAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	68.69	3.7	2.7	8
A2	60	2	0	3
A3	57.89	8	6	11
A4	0	5	2.7	0
A5	44.44	5	0	4
A6	28.57	5	1.3	2
A7	0	1.7	0.7	0
A8	0	4	0	0
A9	0	1.7	0.7	0
A10	0	3	2	0

>TRINITY_DN107307_c0_g1_i2 from sample A1 / Example spliced isoform

AGTCAACCAGACTTATCCATCCCGATTTTTATATACATAGTAGTGTTAGAAAATTTAATATTGACCCTGACAATTTCTTTATTGATATTCTAACCAAGTAATTTATGTAAAATGCTCAATTCTTTCCATAGGCATACTGGGATTGGAGTTTGGACGAATTGGCAGCCTCTGACCTTCCCAACATGATGCATATGGTGAAC
AGCATCACAAACAAAAAGATTTATTACATCGGCTTCTCTCAGGGATCTCAAGCTGCTCTGGCTGCTTTAAGTGATGGGAACCTGGGGGATATTGTGGAAAAAATGGCATTGTTGGCCCCAGTTGCTTATGTCTCCCACGCCTACACACCCATAGGAGTTGCTGCAGTAAATCTGCACTTAGACCAGGTGTTTGAGGCGCT
CGGACTCCATTCATTCAGTACAAAAACGTGAGTATAAGAAAGCCTTTCGAGTTCCTTACGGTAATCCAGTGATAAACTTGGTCCTTTCCTTAGGGTATTCCAGTGATAAACTTGGTCTGAGCAAAAAG

>TRINITY_DN107307_c0_g1_i1 from sample A1 / Example unspliced isoform:

TCGGCTTCTCTCAGgtggctctaataagcttatttataagttgcaaggatcagatcatgagctgttttaagaaatgatatcattattgttgggtaaaatatttgccatgaataacagGGATCTCAAGCTGCTCTGGCTGCTTTAAGTGATGGGAACCTGGGGGATATTGTGGAAAAAATGGCATTGTTGGCCCCAGTTGC
TTATGTCTCCCACGCCTACACACCCATAGGAGTTGCTGCAGTAAATCTGCACTTAGACCAGGTGTTTGAGGCGCTCGGACTCCATTCATTCAGTACAAAAACGTGAGTATAAGAAAGCCTTTCGAGTTCCTTACGGTAATCCAGTGATAAACTTGGTCCTTTCCTTAGGGTATTCCAGTGATAAACTTGGTCTGAGCAAA
AAG

Intron 2 GTAAGAGCAA ... TTCATCTCAG

Found issues: Low number of reads

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	23.08	5	3	0
A2	38.46	8	6	4
A3	63.64	2	4	3
A4	0	2	0	0
A5	23.08	5	2	1
A6	0	5	0	0
A7	26.32	7	3	2
A8	0	3	0	0
A9	0	4	0	0
A10	100	0	1	1

>TRINITY_DN69906_c0_g1_i2 from sample A2 / Example spliced isoform

TTGCAAGGATCAGATCATGAGCTGTTTTAAGAAATGATATCATTATTGTTGGGTAAAATATTTGCCATGAATAACAGGGATCTCAAGCTGCTCTGGCTGCTTTAAGTGATGGGAACCTGGGGGATATTGTGGAAAAAATGGCATTGTTGGCCCCAGTTGCTTATGTCTCCCACGCCTACACACCCATAGGAGTTGCTGCA
GTAAATCTGCACTTAGACCAGGTGTTTGAGGCGCTCGGACTCCATTCATTCAGTACAAAAACGTGAGTATAAG

>TRINITY_DN69906_c0_g1_i1 from sample A2 / Example unspliced isoform:

TTGCAAGGATCAGATCATGAGCTGTTTTAAGAAATGATATCATTATTGTTGGGTAAAATATTTGCCATGAATAACAGGGATCTCAAGCTGCTCTGGCTGCTTTAAGTGATGGGAACCTGGGGGATATTGTGGAAAAAATGGCATTGTTGGCCCCAGTTGCTTATGTCTCCCACGCCTACACACCCATAGGAGTTGCTGCA
GTAAATCTGCACTTAGACCAGgtaagagcaatttcttgttctaactgttttaattctttgtaaagccttttctgcttattcaaatctaagttttattcatctcagGTGTTTGAGGCGCTCGGACTCCATTCATTCAGTACAAAAACGTGAGTATAAG