NA ----> NA

Intron 1 GTGGGGATGG ... TGTCTTTCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	63.64	4	1.5	7
A2	62.5	15	5.5	25
A3	79.31	6	8.5	23
A4	40.91	13	13.5	9
A5	0	1	1.5	0
A6	61.58	78	49	125
A7	65.46	67	32.5	127
A8	64.86	81	61.5	149.5
A9	58.43	69	38.5	97
A10	59.56	55	40.5	81

>TRINITY_DN37844_c0_g2_i6 from sample A8 / Example spliced isoform

CGAACGTACAATCTCCTACCATGTGGGGAGAGACGCTCGCAGTGGCCAGGCCTCCAAAATGAGTTATACTTTTTGGAGTTTTTCCCGTGTTTTTTCTACAATGCACGACACAAACATTGAAAGATCAATGTCCGTGGCTCGTATTTTCTTCTTTCCACCTAATTTACTCTTGCTTTTTTTTATAGTGCCGTAATATCAAC
GAATGATTTCAACTCATGTTTTTCCTTTTAATCCAAAGGATCCATGTGAAATCATTTCGACCTAGTACTCTGTCCACGTTTCCCCGAACTTTCTTTATTCCTTTCCAATGAGAAAGCTACCGTGATGGATTTTTACTCTAAAAACTTATATAAAATCGCTTCGCTCTCATCAAAATCTTAGAGAAAGTCGAGACTGTTAT
CCGAATTCACTTTGAAGGCAGCAAGAACGAGCGAAAGAAAGCAATCAGGATGGGAACGTATTACATTATCAAGAAAGAGGAGGACGAAGGTCCATGTCTGTCTCAATATCTGATTCTACTGGTGGTGGGGATCCTGTTGATTTCGCTCTTCTTGAATCCGCAGACTGGTCGTCCGGCTAGAAGAGGAATTGCGGTTAGGC
GGTGCTATTGATAACAAAACAGGGTTGGTTTGTGGATAGCTGTAATAGGCGAATACAAACGCTTCATTTTGTTTACTTGTGCAGTTATAACACTACATATGGAGACATTGGCACGATGTTATGAAAAGCTGTACCATCAGGCATGTACAACTGGGCATAAAGGCTCTATTTTTGGACAATTGTAGGTCCGACCAATTTAT
GGGCAATTTTTGGCAACTTTTGGACTATGTGTATTTATTTAATTATGTATTTAAGCTATTTAAGTGGATCTTACACTAGTTGGTTTATGGAGTGTTGATGTGACCTCTTCCATGACCACTTCTGGTC

>TRINITY_DN37844_c0_g2_i5 from sample A8 / Example unspliced isoform:

GGTTGATCCTTGTGCTTTTGATCAGTTTAATGGATCCTTGTACTTTTGATGAGTTTAATGGTTGATTTGATCATTTTAATGGTTTGGTTTTCATTAATTGCATTGTAGATTGCAGTATTACCCTGGCCGATCCTTTTTCTTTACTTCCGTTTAATGGTTTATTTGATGATTTTACTATGCTGATTACAATTTATTGCATT
GCCAGGGTTGGTTTGTGGATAGCTGTAATAGGCGAATACAAACGCTTCATTTTGTTTACTTGTGCAGgtggggatgggtattggtttcacgaactgcatgtagcttggtagagttgtctccatatgtcattcgttgggtcatatttgatagtgcatgagtactatttggttggatagtctaggatgatttaaggtgtgat
gttgtctttcagTTATAACACTACATATGGAGACATTGGCACGATGTTATGAAAAGCTGTACCATCAGGCATGTACAACTGGGCATAAAGGCTCTATTTTTGGACAATTGTAGGTCCGACCAATTTATGGGCAATTTTTGGCAACTTTTGGACTATGTGTATTTATTTAATTATGTATTTAAGCTATTTAAGTGGATCTT
ACACTAGTTGGTTTATGGAGTGTTGATGTGACCTCTTCCATGACCACTTCTGGTC