NA ----> NA
Intron 1 GTGAGATGTC ... TAATTTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 59.38 | 13 | 18 | 20 |
| A2 | 68.75 | 5 | 13 | 9 |
| A3 | 70 | 9 | 27 | 15 |
| A4 | 77.78 | 2 | 7 | 7 |
| A5 | 76.47 | 2 | 5 | 8 |
| A6 | 22.73 | 68 | 19 | 21 |
| A7 | 24.05 | 60 | 19 | 19 |
| A8 | 19.86 | 111 | 24 | 31 |
| A9 | 15.48 | 71 | 15 | 11 |
| A10 | 24.59 | 69 | 33 | 12 |
>TRINITY_DN46725_c7_g1_i11 from sample A8 / Example spliced isoformAAGCTAAAAATATCCAAAGAGGTTATATTTGCATTGTTTAGGGACCCTCGGACGGGGGAAATCCCTAATGCAAGCAAGCCGCATATCTCCATTGAGTGGTGCACGTTTCAACCATTTGTTGATAACTAGATGGACAGATGGTACATGGTTTTTGATATGCCACCACACAACAACAGGGAAATTCCCTTATATTTCCTTCG
AAAGATGTATGCAGAGTTCGTGTTGCATAAACACGTTAACTATTTTGACATCTTACAGTTCCAGGGGATCGGTGGGGGGATGCCCCAAAACCGACCCAATGCCAGGCTTCGAGACCAGGATCGCCCTATCCCTGCACCTCGCAGGCAGTTGCCTGGGCCAGATGTCCCACCAGCACATCGCATTATTCCGCAGACACGGG
ATGCATTTTTGAGTTTGGCACGGACGGTTGTTCGCCATGGCAGGATGGTTCAACATATGGGTGAGGAAGGGACATCTGTCCCTGGTGTGGTACATACACCAGCTCGTCACCATGCAGGACCATCAGCTACTGCAGGACCATCAGGACCATCCACTTCTGCAGGACCATCAGGACCATCCACTAGTGGAGGACCATCAGCT
ATTCCCCATCCTAGTACTGATCCTCACGAGTGCACATCATGTGGTCGTCCCTGCTATGGTATTGCATCAGATGTTGCCTTCAGTGGCTTTTTGAGAGAGTTGATGATGATTACCGGCAGTGACGCCCTAGAGCCGGATGTTCCAGACTCGGCAGGCCCATCTTATATACCACCTATTGCCGTATCTCACACCGAGATGGC
AGATCCTTCACAGGGGCAAGGTAATGTGGAGGTAGTGCCCATGGTCATACCGTCCCCTGAAACGTCTGGGCTCCAGGCACCATCCGACACATCTGGCCCATTGCCTGTATTTGCATCTCCCTCCAGGCCATTCGTGAACAAGGGTCGTGTGTATGTGAGGCGTTCTACTCCGAGGAAGACTCCAGCTGCCCACGACCATG
GGCTTACTCACACCACGGAACCTGAGTTGTCTGCTGAGAACCTTGCATCGATGGTTGATGCAGCAGTTAGTGCCGCATCTGCAGTGGCGACTGATCACACACAGCCACCACTAGCAGGAGCAGTGCCTGGCCCCCCTGGTTCAACCATCCTGGATGTTCAACCGACGGCTCCATCTGCTACACAAGCAACACAATCTCCT
TTGTCAGTTGAGGATCCAGGGATGCACATTGATCCTAGGGATGTGCCTAGAGGATCAACGTCGGGAAAGAACAAGAGAAAGCTTGAGTTTTGATACTTTTGGATAGTTTTGGACACATGTGCTTTTGGATACTTTTGTATATATATGTACTTTTCGATACATTCAGTTTTGGAGACATGTACATTGACTTCATTGGATAC
ATGTATTTTTGGATACTTTTGGATATAGATGTATTTTTGGAGACATGCACTTTTGGATATATATGTACTTTTGGAGACATGCACATTGACATTTCACTTATAAATG
>TRINITY_DN46725_c7_g1_i15 from sample A8 / Example unspliced isoform:AAGCTAAAAATATCCAAAGAGGTTATATTTGCATTGTTTAGGGACCCTCGGACGGGGGAAATCCCTAATGCAAGCAAGCCGCATATCTCCATTGAGTGGTGCACGTTTCAACCATTTGTTGATAACTAGATGGACAGATGGTACATGGTTTTTGATATGCCACCACACAACAACAGGGAAATTCCCTTATATTTCCTTCG
AAAGATGTATGCAGAGTTCGTGTTGCATAAACACGTTAACTATTTTGACATCTTACAGTTCCAGGGGATCGGTGGGGGGATGCCCCAAAACCGACCCAATGCCAGGCTTCGAGACCAGGATCGCCCTATCCCTGCACCTCGCAGGCAGTTGCCTGGGCCAGATGTCCCACCAGCACATCGCATTATTCCGCAGACACGGG
ATGCATTTTTGAGTTTGGCACGGACGGTTGTTCGCCATGGCAGGATGGTTCAACATATGGGTGAGGAAGGGACATCTGTCCCTGGTGTGGTACATACACCAGCTCGTCACCATGCAGGACCATCAGCTACTGCAGGACCATCAGGACCATCCACTTCTGCAGGACCATCAGGACCATCCACTAGTGGAGGACCATCAGCT
ATTCCCCATCCTAGTACTGATCCTCACGAGTGCACATCATGTGGTCGTCCCTGCTATGGTATTGCATCAGATGTTGCCTTCAGTGGCTTTTTGAGAGAGTTGATGATGATTACCGGCAGTGACGCCCCAGAGCCGGATGTTCCAGACTCGACAGGGGGGCATGATGCTACCCATTCGGCAGGCCCATCTTATATACCACC
TATTGCCGTATCTCACACCGAGATGGCAGATCCTTCACAGGGGCAAGGTAATGTGGAGGTAGTGCCCATGGTCATACCGTCCCCTGAAACGTCTGGGCTCCAGGCACCATCCGACACATCTGGCCCATTGCCTGTATTTGCATCTCCCTCCAGGCCATTCGTGAACAAGGGTCGTGTGTATGTGAGGCGTTCTACTCCGA
GGAAGACTCCAGCTGCCCACGACCATGGGCTTACTCACACCACGGAACCTGAGTTGTCTGCTGAGAACCTTGCATCGATGGTTGATGCAGCAGTTAGTGCCGCATCTGCAGTGGCGACTGATCACACACAGCCACCACTAGCAGGAGCAGTGCCTGGCCCCCCTGGTTCAACCATCCTGGATGTTCAACCGACGGCTCCA
TCTGCTACACAAGCAACACAATCTCCTTTGTCAGTTGAGgtgagatgtccttcagtgaccaagtgtttcatgcactttccatgcaccagttgataattgttgagataatgtattagtgtacatagttagttgaatttaacaattgatatttaatttgcagGATCCAGGGATGCACATTGATCCTAGGGATGTGCCTAGAG
GATCAACGTCGGGAAAGAACAAGAGAAAGCTTGAGTTTTGATACTTTTGGATAGTTTTGGACACATGTGCTTTTGGATACTTTTGTATATATATGTACTTTTCGATACATTCAGTTTTGGAGACATGTACATTGACTTCATTGGATACATGTATTTTTGGATACTTTTGGATATAGATGTATTTTTGGAGACATGCACTT
TTGGATATATATGTACTTTTGGAGACATGCACATTGACATTTCACTTATAAATG