sp|Q9FPS0|UBP27_ARATH ----> Ubiquitin carboxyl-terminal hydrolase 27
Intron 1 GTGAGTATCT ... CGGAGCACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 81.25 | 3 | 19 | 7 |
| A2 | 82.57 | 2 | 16 | 3 |
| A3 | 62.35 | 9 | 14 | 16 |
| A4 | 64.5 | 7 | 11.5 | 14 |
| A5 | 59.6 | 2 | 4 | 2 |
| A6 | 69.05 | 2 | 5 | 4 |
| A7 | 38.46 | 4 | 5 | 0 |
| A8 | 25 | 1 | 1 | 0 |
| A9 | 60.92 | 3 | 6.5 | 3 |
| A10 | 25 | 6 | 4 | 0 |
>TRINITY_DN42077_c0_g1_i15 from sample A9 / Example spliced isoformTGAGTGCTCAATTTTGTTTTGGTTTGTTTGTTTGTGTGACCATGTGGTGCAGTTTGATCTTGTTCTGAGTGCTCAATTTTGTTTTGGTTTGTTTGTTTGTGTGACCATGTGGTGCAGTTTGATCTTGTTCTGAGTGCTCAATTTTGTTTTGGTGTGTTTGTATTTGATGTTCTGACTTGTATTGTGTTGTAAGCAGAATT
ACAGAATTGCAGAAGACGCATGTTATGGGTTAACCAGAAAACTAAAATCGATGAAGTGTTTCACTGAATCTGAATCCTCTTCTTCATCTTCAACATTACACAATATGTGTGGAATTTAGCAGCTGGATCAAACAAGAGAATTACAGAGAGGAAGGGAGGCAGAATTAGGCGCAGGGTGGGCAACGTTACCTTTTTGAGCT
ATGATAGTTGATGAATTATCTGGCACCTTCTCACCGCTATTTTATTATCTGGTAACTGTATTATGTGAAAAACTTGTCTATTCTCTGTCAAATATGTCTAGAGAGCTTATCAGCTTCTATGTTATAATCACTTATTAGTCTTTACATAGTTGAGCCACAATTCACTAAGTTTTCACTAAGTTTTGATTACTTAGTGATTT
TTAATTACTAAGCTTTGAGCCACAATTCGCAAA
>TRINITY_DN42077_c0_g1_i16 from sample A9 / Example unspliced isoform:TGAGTGCTCAATTTTGTTTTGGTTTGTTTGTTTGTGTGACCATGTGGTGCAGTTTGATCTTGTTCTGAGTGCTCAATTTTGTTTTGGTTTGTTTGTTTGTGTGACCATGTGGTGCAGTTTGATCTTGTTCTGAGTGCTCAATTTTGTTTTGGTGTGTTTGTATTTGATGTTCTGACTTGTATTGTGTTGTAAGCAGAATT
ACAGAATTGCAGAAGACGCATGTTATGGGTTAACCAGAAAACTAAAATCGATGAAGTGTTTCACTGAATCTGAATCCTCTTCTTCATCTTCAACATTACACAATATGTGTGGAATTTAGCAGCTGGATCAAACAAGAGAATTACAGAGAGGAAGGGAGGCAGAATTAGGCGCAGGGTGGGCAACGTTACCTTTTTGAGCT
ATGgtgagtatctgtcaacagttttcttcaatctttgtttagttcatcacaaaatctatatggcctctagtataactaaaccctaaatcatagtctaattcatttataagtttatacatcaacatttattgtgtagtcttttgcttgcctatgcttttttctctttagggttaagacaaaaatcgatgtaatgtttcagt
gaaatatgcatgtctacaacccctaaactggtcaaattttatcgatctgtacaatttcatggctatttacaaccctatattcgtcaaattttatttatatgtaccatttcatggatatttacagtgtcctttccatgtgcatgttttgtacggagcacagATAGTTGATGAATTATCTGGCACCTTCTCACCGCTATTTT
ATTATCTGGTAACTGTATTATGTGAAAAACTTGTCTATTCTCTGTCAAATATGTCTAGAGAGCTTATCAGCTTCTATGTTATAATCACTTATTAGTCTTTACATAGTTGAGCCACAATTCACTAAGTTTTCACTAAGTTTTGATTACTTAGTGATTTTTAATTACTAAGCTTTGAGCCACAATTCGCAAA
Intron 2 GTGAGTCTGT ... TTCTCTTTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 35.63 | 18.5 | 10 | 3 |
| A2 | 45.53 | 28.5 | 22 | 6 |
| A3 | 33.16 | 33 | 14 | 1 |
| A4 | 38.01 | 20.5 | 12 | 3 |
| A5 | 54.11 | 9 | 7 | 2 |
| A6 | 11.8 | 15 | 2 | 1 |
| A7 | 5.28 | 18 | 1 | 1 |
| A8 | 24.55 | 17 | 5 | 0 |
| A9 | 16.71 | 16.5 | 3 | 1 |
| A10 | 12.41 | 14.5 | 2 | 0 |
>TRINITY_DN106234_c0_g1_i1 from sample A2 / Example spliced isoformTGAGTGCTCAATTTTGTTTTGGTTTGTTTGTTTGTGTGACCATGTGGTGCAGTTTGATCTTGTTCTGAGTGCTCAATTTTGTTTTGGTTTGTTTGTTTGTGTGACCATGTGGTGCAGTTTGATCTTGTTCTGAGTGCTCAATTTTGTTTTGGTGTGTTTGTATTTGATGTTCTGACTTGTATTGTGTTGTAAGCAGAATT
ACAGAATTGCAGAAGACGCATGTTATGGGTTAACCAGAAAACTAAAATCGATGAAGTGTTTCACTGAATCTGAATCCTCTTCTTCATCTTCAACATTACACAATATGTGTGGAATTTAGCAGCTGGATCAAACAAGAGGTATATTCGTTGCTCGCGGTCGCCTTTTCCAGTTGCG
>TRINITY_DN106234_c0_g1_i3 from sample A2 / Example unspliced isoform:TGAGTGCTCAATTTTGTTTTGGTTTGTTTGTTTGTGTGACCATGTGGTGCAGTTTGATCTTGTTCTGAGTGCTCAATTTTGTTTTGGTTTGTTTGTTTGTGTGACCATGTGGTGCAGTTTGATCTTGTTCTGAGTGCTCAATTTTGTTTTGGTGTGTTTGTATTTGATGTTCTGACTTGTATTGTGTTGTAAGCAGAATT
ACAGAATTGCAGAAGACGCATGTTATGgtgagtctgtcacagttttcttcattctttgtttggctattcacaaaatctagagactaaaatcaatgaaatgtttcattctttatttggttattcacaaaatctagtatctgtctttttctctttagGGTTAACCAGAAAACTAAAATCGATGAAGTGTTTCACTGAATCTG
AATCCTCTTCTTCATCTTCAACATTACACAATATGTGTGGAATTTAGCAGCTGGATCAAACAAGAG