sp|B9HBA8|ACCC1_POPTR ----> Biotin carboxylase 1, chloroplastic
Intron 1 GTTGACTATC ... GACTTCAAAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 75.68 | 9 | 26 | 30 |
| A2 | 80.72 | 8 | 30 | 37 |
| A3 | 76.98 | 16 | 61 | 46 |
| A4 | 81.58 | 7 | 37 | 25 |
| A5 | 73.33 | 8 | 26 | 18 |
| A6 | 83.33 | 1 | 4 | 6 |
| A7 | 80 | 4 | 14 | 18 |
| A8 | 63.64 | 2 | 1 | 6 |
| A9 | 71.43 | 2 | 5 | 5 |
| A10 | 81.82 | 4 | 25 | 11 |
>TRINITY_DN110517_c2_g1_i1 from sample A3 / Example spliced isoformCAGTGACAGATCCACATATACTTCCAGTGATATTGCGTTTAGTAAGCCGTTATGAACTATCTGCTGCAGAGTCAGATTTGTTCCAGCTTCTTTTTGTTCACGGTGCCTCCAAATCTGTTTCATTTCGTGCTGTGACAGGAGGAAAGTATGATGACGAGGAGATGGCTGTGAAGTTTTGTAGAATGAGCATTTTGGAGCTG
GAAGAGTTCTTGGATGACAAACGAACTCATATATCTGAGGGCATTATTGTAGGACAAATTCAAAACAATAAGCTCGTAGATACTATTGAACATGTTTCCCAGATATCACTACCAGCTTTTACAGAGGGTAACGCTACGTGTTCTCCTTTGGGTTTTCAAACTGGATTGGACAATTCTTTTTCTCAAAAGGGGAAAGGTGA
AGCATTTCAGGAGGCTATGGATGAGGATTTAGCAGTTGGAGTGGCAGATCTAAATAAATCGGTCAATGAAATACAAACATTTGTCTGCCAAGAGATCACAGTGGCTGCTGAAAATGAAAGTAAAGAAACAGAATTTTGTGGAATCGATGGTGGAGTCAGCAGTAAAACATGTGCTCTTCCCTCTGGTCCAATAGATGAAG
TGGCTAAATCTTTAACAAGTGATATTGGGCCATACAGTTCAAGTCTTGAATATCTGGATGATGCATTTCAGGTTTTAGCACTGATGCTTCGAATTGCAAAAGCACGCCATAAAGAGAATATAAAAGAAGCTTGTAACGATGAGCGCGCATGGTATGATATCCACCGACCAACTAAAGTTTCTAGCATACGGGAGTTATGT
GCAAAGCGGAAGTATGTGCAGAATCGTCTTCAGGAAAGGATCAGACTTACAGAACAAGGATTAAAAGATGGGTCTACAGAACTTCCTCGTTTGGAGGCACTGGCTAGAAAACCCGG
>TRINITY_DN110517_c2_g1_i11 from sample A3 / Example unspliced isoform:CAGTGACAGATCCACATATACTTCCAGTGATATTGCGTTTAGTAAGCCGTTATGAACTATCTGCTGCAGAGTCAGATTTGTTCCAGCTTCTTTTTGTTCACGGTGCCTCCAAATCTGTTTCATTTCGTGCTGTGACAGGAGGAAAGTATGATGACGAGGAGATGGCTGTGAAGTTTTGTAGAATGAGCATTTTGGAGCTG
GAAGAGTTCTTGGATGACAAACGAACTCATATATCTGAGGGCATTATTGTAGGACAAgttgactatcatgggaaaacaattcggatggccaaggaagctatatcagcattgttgctgaggcccttgaatactgatcagcgattgaaattgagcaagacagagcttcttaatgttatggagacttcaaagATTCAAAACAA
TAAGCTCGTAGATACTATTGAACATGTTTCCCAGATATCACTACCAGCTTTTACAGAGGGTAACGCTACGTGTTCTCCTTTGGGTTTTCAAACTGGATTGGACAATTCTTTTTCTCAAAAGGGGAAAGGTGAAGCATTTCAGGAGGCTATGGATGAGGATTTAGCAGTTGGAGTGGCAGATCTAAATAAATCGGTCAATG
AAATACAAACATTTGTCTGCCAAGAGATCACAGTGGCTGCTGAAAATGAAAGTAAAGAAACAGAATTTTGTGGAATCGATGGTGGAGTCAGCAGTAAAACATGTGCTCTTCCCTCTGGTCCAATAGATGAAGTGGCTAAATCTTTAACAAGTGATATTGGGCCATACAGTTCAAGTCTTGAATATCTGGATGATGCATTT
CAGGTTTTAGCACTGATGCTTCGAATTGCAAAAGCACGCCATAAAGAGAATATAAAAGAAGCTTGTAACGATGAGCGCGCATGGTATGATATCCACCGACCAACTAAAGTTTCTAGCATACGGGAGTTATGTGCAAAGCGGAAGTATGTGCAGAATCGTCTTCAGGAAAGGATCAGACTTACAGAACAAGGATTAAAAGA
TGGGTCTACAGAACTTCCTCGTTTGGAGGCACTGGCTAGAAAACCCGG
Intron 2 GTAGGTACTA ... ATGCTTTTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 22.22 | 133 | 41 | 35 |
| A2 | 20.33 | 96 | 15 | 34 |
| A3 | 25.82 | 125 | 43 | 44 |
| A4 | 17.21 | 89 | 19 | 18 |
| A5 | 21.43 | 66 | 12 | 24 |
| A6 | 19.53 | 136 | 17 | 49 |
| A7 | 20.05 | 297 | 48 | 101 |
| A8 | 18.22 | 220 | 33 | 65 |
| A9 | 18.18 | 243 | 39 | 69 |
| A10 | 19.16 | 327 | 42 | 113 |
>TRINITY_DN120333_c10_g1_i6 from sample A2 / Example spliced isoformTGTGGATTTCTGTATAAGATTTTAGCTTAGAGATGTCACATTAATGTGTGTAAATCTGAGCATTCATGCTTTGAAATGGCGTGTCGAGATTATGCGAATGAATCCAAGTTTCCAGGGCATCCTGCAAATCTGTGAAAGAAAATGGAGACAATAAGTTTATCCAAGTCCTTTTGCTCAGTTCGGGCCCCAGCTGCTGTGGC
CACTTCGAGTGGCAATAAGTCAAAGTCTTGCCATTCTAATGGACTGAGCTACCCACTTAGAGGGTCGACCAAAGGTATCAGGAGTGCAAGCTGCAGCTTTTTGAGTGGGAGTGAAACCGATGTCTTCAGACATGCTGTTCGCGCGATTGGTAAGTCAAAAACTGGTGGCGGAGCCCTTAGCTGTACATGTGACTACCAGA
AGATCCTCATTGCAAACAGGGGGGAAATCGCTGTTCGCGTGATTCGCACAGCACATGAAATGGGCATTCAGTGTGTGGCGGTACACTCTACAGTAGATAAGCAAGCACTCCATGTTCAAATCGCAGACGAGGCCGTATGCATTGGAGAGGCACCGAGCAGTCAATCATATTTAGTTATCCCAAATATTGTAGCAGCTGCA
GTGAGCCGTGGCTGTACCATGCTACACCCTGGATATGGTTTTCTTTCTGAAAATGCTAGCTTTGTGGACATCTGTAAAGAGCATGGAATCAACTTTATTGGGCCAAGTCCAGACAGCATTCGTGTTATGGGTGACAAAGCAACAGCTCGGGAAACAATGAAAAAAGCTGGGGTTCCAACTGTACCAGGAAGTGATGGGCT
TTTAGAGTCAACAGAAGAGGCTATCACGGTTGCTAATGAGATTGGTTTTCCAGTAATGATCAAGGCAACTGCAGGTGGTGGAGGTCGTGGAATGCGATTGGCCAATGAACCAGGAGAGTTCGTGAAGTTATTACAGCAAGCCAAGAGTGAGGCAGGTGCAGCCTTTGGGAATGATGGCGTTTATTTGGAGAGGTACATAA
AAAACCCTAGACATATTGAGTTCCAGATTCTTGCAGACAAACATGGTAATTGTATCCACTTTGGAGAGCGTGATTGCAGTATTCAGCGGAGGAATCAAAAGCTTCTAGAGGAAGCACCATCTCCTGCTTTGACCTCTGAGCTAAGAAGTGCCATGGGGGATGCTGCGGTTGCAGCTGCTTTATCTATAGGATATATTGGG
GTTGGCACCGTTGAATTTCTTCTAGATGAAAGTGGTGACTTCTATTTCATGGAGATGAACACTAGGATCCAGGTGGAGCATCCAATAACTGAAATGATCTCCTCCACTGATTTAATTGAGGAACAAATTCGTGTTGCACTAGGAGAGAAGCTTCGAATGAAACAGGAAGATGTGGTGTTGAGAGGACACTCCATTGAATG
CAGAATCAATGCTGAGGATGCTTTCCAAGGATTTCGCCCAGGGCCAGGTAGGATAACAGGTTACTTGCCACCAGGAGGTCCATTTGTGCGAATGGATAGCCACATTTATTCCGATTACGTAGTTCCTCCAAGCTATGACTCTCTATTAGGAAAGCTTATCGTCTGGGCACCTACTAGAGAGAAGGCAATCGCACGTATGC
AAAGAGCTCTTAATGAAACTATTATAGTAGGAATACCTACTACCATTGACTATCATAAACTTATCCTAGAAACTCAGGACTTCAAGGATGGAAAAATTGATACAGCATTCATTCCCAAACATGAAGAGGAGTTGGCTTCTCCTCATGATGCTGTGCAAGTGCCTGTACCCACGAAGAGCGCTGTTAAAGCACTTGCTTGA
ATTCAAAGTTTCATGATGTGAGTTTAGTTATCAGGGTTGATTGTTTTGGTCGCAGAAACAGGCCTGCAGAATAGTGAAATTGCTCCTAATATTGTAGCCTATGATGGTTTATGCAGAAGCCACTTAATAATTGACAAGCTTGTCTGATTTAAAAGCCAAGCTCCTGTCGTTGCATTTTTATTCCAGAGGTTATTATGTAA
TTGATTCAACATCATTGTTCCTAACAATATGGCTTTTATGGCTATATGTTCTAGGGCATTCCAATCATGAACAAATTGAAATGAGCTATTTCTTTTAGTCAACGTATGAAATCATTTATCAAATAAACGTAGAAATTTACTGTTATTGATGTCCCCGTGCCTGCTAAAGAATACCGCAGTCCATCACCATCTAAAAAGAA
ATTTGTGTTATTTGTTATGAAGCCCCTACCAGATATTACGCTCCATTACATCGATCATATTTATTCTCATTTGCCGAAGTTCTGAGTATCAATTAACCAA
>TRINITY_DN120333_c10_g1_i4 from sample A2 / Example unspliced isoform:CAGAAACGCTAAAAATATTTACTTAAAAACGGGAACGAATGTAAGAGTACAATCAATGTGGAGTGGGCGGAGCTTACTATGAGCAGCGAGCATTGTAATCATCGAAACATTTTTCATATTCATACTCTCCATCCACATCTTTCCTTGCACATCGATCGAGCAACAGATTCGTAGGACTTGCAGGTTTCCAGGGCATCCTG
CAAATCTGTGAAAGAAAATGGAGACAATAAGTTTATCCAAGTCCTTTTGCTCAGTTCGGGCCCCAGCTGCTGTGGCCACTTCGAGTGGCAATAAGTCAAAGTCTTGCCATTCTAATGGACTGAGCTACCCACTTAGAGGGTCGACCAAAGGTATCAGGAGTGCAAGCTGCAGCTTTTTGAGTGGGAGTGAAACCGATGTC
TTCAGACATGCTGTTCGCGCGATTGGTAAGTCAAAAACTGGTGGCGGAGCCCTTAGCTGTACATGTGACTACCAGAAGATCCTCATTGCAAACAGGGGGGAAATCGCTGTTCGCGTGATTCGCACAGCACATGAAATGGGCATTCAGTGTGTGGCGGTACACTCTACAGTAGATAAGCAAGCACTCCATGTTCAAATCGC
AGACGAGGCCGTATGCATTGGAGAGGCACCGAGCAGTCAATCATATTTAGTTATCCCAAATATTGTAGCAGCTGCAGTGAGCCGTGGCTGTACCATGCTACACCCTGGATATGGTTTTCTTTCTGAAAATGCTAGCTTTGTGGACATCTGTAAAGAGCATGGAATCAACTTTATTGGGCCAAGTCCAGACAGCATTCGTG
TTATGGGTGACAAAGCAACAGCTCGGGAAACAATGAAAAAAGCTGGGGTTCCAACTGTACCAGGAAGTGATGGGCTTTTAGAGgtaggtactagaatcttttctgttaagtaatggagagtattatggtattgtcagctagagaaagttgttgtgcgtacactagaatctccatttctaggattctgcaagtttcttcat
ttgtagatcaatttgagttgagaatatatttttcttatattaatcatcattatatatctgacattgtgagcatgcttttagTCAACAGAAGAGGCTATCACGGTTGCTAATGAGATTGGTTTTCCAGTAATGATCAAGGCAACTGCAGGTGGTGGAGGTCGTGGAATGCGATTGGCCAATGAACCAGGAGAGTTCGTGAA
GTTATTACAGGCATGCAAGCATACCTAATTACCCGAGTTGCTTTTATTTCCTTTTAGGTTTTTGAGATCATGATTTTCCTTTCTATCCGGTTCGTTTATTTGTCAAATGTTGCATATAAAAATGGATCTTTGAGAATGCG
Intron 3 GTGAGTTTAG ... GTTTATGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 73.77 | 24 | 65 | 70 |
| A2 | 73.97 | 19 | 44 | 64 |
| A3 | 67.79 | 24 | 36 | 65 |
| A4 | 79.83 | 12 | 51 | 44 |
| A5 | 89.83 | 3 | 19 | 34 |
| A6 | 72.1 | 148 | 262 | 503 |
| A7 | 72.91 | 131 | 244 | 461 |
| A8 | 74.34 | 214 | 456 | 784 |
| A9 | 72.46 | 137 | 274 | 447 |
| A10 | 73.6 | 87 | 202 | 283 |
>TRINITY_DN32838_c0_g1_i1 from sample A6 / Example spliced isoformTAACAACTCCGATAAATCTTAAAAAAAGAAGAAGCAGAAACGCTAAAAATATTTACTTAAAAACGGGAACGAATGTAAGAGTACAATCAATGTGGAGTGGGCGGAGCTTACTATGAGCAGCGAGCATTGTAATCATCGAAACATTTTTCATATTCATACTCTCCATCCACATCTTTCCTTGCACATCGATCGAGCAACAG
ATTCGTAGGACTTGCAGGTTTCCAGGGCATCCTGCAAATCTGTGAAAGAAAATGGAGACAATAAGTTTATCCAAGTCCTTTTGCTCAGTTCGGGCCCCAGCTGCTGTGGCCACTTCGAGTGGCAATAAGTCAAAGTCTTGCCATTCTAATGGACTGAGCTACCCACTTAGAGGGTCGACCAAAGGTATCAGGAGTGCAAG
CTGCAGCTTTTTGAGTGGGAGTGAAACCGATGTCTTCAGACATGCTGTTCGCGCGATTGGTAAGTCAAAAACTGGTGGCGGAGCCCTTAGCTGTACATGTGACTACCAGAAGATCCTCATTGCAAACAGGGGGGAAATCGCTGTTCGCGTGATTCGCACAGCACATGAAATGGGCATTCAGTGTGTGGCGGTACACTCTA
CAGTAGATAAGCAAGCACTCCATGTTCAAATCGCAGACGAGGCCGTATGCATTGGAGAGGCACCGAGCAGTCAATCATATTTAGTTATCCCAAATATTGTAGCAGCTGCAGTGAGCCGTGGCTGTACCATGCTACACCCTGGATATGGTTTTCTTTCTGAAAATGCTAGCTTTGTGGACATCTGTAAAGAGCATGGAATC
AACTTTATTGGGCCAAGTCCAGACAGCATTCGTGTTATGGGTGACAAAGCAACAGCTCGGGAAACAATGAAAAAAGCTGGGGTTCCAACTGTACCAGGAAGTGATGGGCTTTTAGAGTCAACAGAAGAGGCTATCACGGTTGCTAATGAGATTGGTTTTCCAGTAATGATCAAGGCAACTGCAGGTGGTGGAGGTCGTGG
AATGCGATTGGCCAATGAACCAGGAGAGTTCGTGAAGTTATTACAGCAAGCCAAGAGTGAGGCAGGTGCAGCCTTTGGGAATGATGGCGTTTATTTGGAGAGGTACATAAAAAACCCTAGACATATTGAGTTCCAGATTCTTGCAGACAAACATGGTAATTGTATCCACTTTGGAGAGCGTGATTGCAGTATTCAGCGGA
GGAATCAAAAGCTTCTAGAGGAAGCACCATCTCCTGCTTTGACCTCTGAGCTAAGAAGTGCCATGGGGGATGCTGCGGTTGCAGCTGCTTTATCTATAGGATATATTGGGGTTGGCACCGTTGAATTTCTTCTAGATGAAAGTGGTGACTTCTATTTCATGGAGATGAACACTAGGATCCAGGTGGAGCATCCAATAACT
GAAATGATCTCCTCCACTGATTTAATTGAGGAACAAATTCGTGTTGCACTAGGAGAGAAGCTTCGAATGAAACAGGAAGATGTGGTGTTGAGAGGACACTCCATTGAATGCAGAATCAATGCTGAGGATGCTTTCCAAGGATTTCGCCCAGGGCCAGGTAGGATAACAGGTTACTTGCCACCAGGAGGTCCATTTGTGCG
AATGGATAGCCACATTTATTCCGATTACGTAGTTCCTCCAAGCTATGACTCTCTATTAGGAAAGCTTATCGTCTGGGCACCTACTAGAGAGAAGGCAATCGCACGTATGCAAAGAGCTCTTAATGAAACTATTATAGTAGGAATACCTACTACCATTGACTATCATAAACTTATCCTAGAAACTCAGGACTTCAAGGATG
GAAAAATTGATACAGCATTCATTCCCAAACATGAAGAGGAGTTGGCTTCTCCTCATGATGCTGTGCAAGTGCCTGTACCCACGAAGAGCGCTGTTAAAGCACTTGCTTGAATTCAAAGTTTCATGATAAGCCACTTAATAATTGACAAGCTTGTCTGATTTAAAAGCCAAGCTCCTGTCGTTGCATTTTTATTCCAGAGG
TTATTATGTAATTGATTCAACATCATTGTTCCTAACAATATGGCTTTTATGGCTATATGTTCTAGGGCATTCCAATCATGAACAAATTGAAATGAGCTATTTCTTTTAGTCAACGTATGAAATCATTTATCAAATAAACGTAGAAATTTACTGTTATTGATGTCCCCGTGCCTGCTAAAGAATACCGCAGTCCATCACCA
TCTAAAAAGAAATTTGTGTTATTTGTTATGAAGCCCCTACCAGATATTACGCTCCATTACATCGATCATATTTATTCTCATTTGCCGAAGTTCTGAGTATCAATTAACCAAAAAAAAATCCAATTCTAATATTGGCAGATGAACATTGACATCATTTGAGTTATAAGTGAATGAGGAATTTATTGGAACTTTTATACTAA
TATGATAGAAAATGCCCGGGGTAATTGCAACGTGTGTGGTTGCAAGCTCGCATTCCTTGC
>TRINITY_DN32838_c0_g1_i3 from sample A6 / Example unspliced isoform:TAACAACTCCGATAAATCTTAAAAAAAGAAGAAGCAGAAACGCTAAAAATATTTACTTAAAAACGGGAACGAATGTAAGAGTACAATCAATGTGGAGTGGGCGGAGCTTACTATGAGCAGCGAGCATTGTAATCATCGAAACATTTTTCATATTCATACTCTCCATCCACATCTTTCCTTGCACATCGATCGAGCAACAG
ATTCGTAGGACTTGCAGGTTTCCAGGGCATCCTGCAAATCTGTGAAAGAAAATGGAGACAATAAGTTTATCCAAGTCCTTTTGCTCAGTTCGGGCCCCAGCTGCTGTGGCCACTTCGAGTGGCAATAAGTCAAAGTCTTGCCATTCTAATGGACTGAGCTACCCACTTAGAGGGTCGACCAAAGGTATCAGGAGTGCAAG
CTGCAGCTTTTTGAGTGGGAGTGAAACCGATGTCTTCAGACATGCTGTTCGCGCGATTGGTAAGTCAAAAACTGGTGGCGGAGCCCTTAGCTGTACATGTGACTACCAGAAGATCCTCATTGCAAACAGGGGGGAAATCGCTGTTCGCGTGATTCGCACAGCACATGAAATGGGCATTCAGTGTGTGGCGGTACACTCTA
CAGTAGATAAGCAAGCACTCCATGTTCAAATCGCAGACGAGGCCGTATGCATTGGAGAGGCACCGAGCAGTCAATCATATTTAGTTATCCCAAATATTGTAGCAGCTGCAGTGAGCCGTGGCTGTACCATGCTACACCCTGGATATGGTTTTCTTTCTGAAAATGCTAGCTTTGTGGACATCTGTAAAGAGCATGGAATC
AACTTTATTGGGCCAAGTCCAGACAGCATTCGTGTTATGGGTGACAAAGCAACAGCTCGGGAAACAATGAAAAAAGCTGGGGTTCCAACTGTACCAGGAAGTGATGGGCTTTTAGAGTCAACAGAAGAGGCTATCACGGTTGCTAATGAGATTGGTTTTCCAGTAATGATCAAGGCAACTGCAGGTGGTGGAGGTCGTGG
AATGCGATTGGCCAATGAACCAGGAGAGTTCGTGAAGTTATTACAGCAAGCCAAGAGTGAGGCAGGTGCAGCCTTTGGGAATGATGGCGTTTATTTGGAGAGGTACATAAAAAACCCTAGACATATTGAGTTCCAGATTCTTGCAGACAAACATGGTAATTGTATCCACTTTGGAGAGCGTGATTGCAGTATTCAGCGGA
GGAATCAAAAGCTTCTAGAGGAAGCACCATCTCCTGCTTTGACCTCTGAGCTAAGAAGTGCCATGGGGGATGCTGCGGTTGCAGCTGCTTTATCTATAGGATATATTGGGGTTGGCACCGTTGAATTTCTTCTAGATGAAAGTGGTGACTTCTATTTCATGGAGATGAACACTAGGATCCAGGTGGAGCATCCAATAACT
GAAATGATCTCCTCCACTGATTTAATTGAGGAACAAATTCGTGTTGCACTAGGAGAGAAGCTTCGAATGAAACAGGAAGATGTGGTGTTGAGAGGACACTCCATTGAATGCAGAATCAATGCTGAGGATGCTTTCCAAGGATTTCGCCCAGGGCCAGGTAGGATAACAGGTTACTTGCCACCAGGAGGTCCATTTGTGCG
AATGGATAGCCACATTTATTCCGATTACGTAGTTCCTCCAAGCTATGACTCTCTATTAGGAAAGCTTATCGTCTGGGCACCTACTAGAGAGAAGGCAATCGCACGTATGCAAAGAGCTCTTAATGAAACTATTATAGTAGGAATACCTACTACCATTGACTATCATAAACTTATCCTAGAAACTCAGGACTTCAAGGATG
GAAAAATTGATACAGCATTCATTCCCAAACATGAAGAGGAGTTGGCTTCTCCTCATGATGCTGTGCAAGTGCCTGTACCCACGAAGAGCGCTGTTAAAGCACTTGCTTGAATTCAAAGTTTCATGATgtgagtttagttatcagggttgattgttttggtcgcagaaacaggcctgcagaatagtgaaattgctcctaat
attgtagcctatgatggtttatgcagAAGCCACTTAATAATTGACAAGCTTGTCTGATTTAAAAGCCAAGCTCCTGTCGTTGCATTTTTATTCCAGAGGTTATTATGTAATTGATTCAACATCATTGTTCCTAACAATATGGCTTTTATGGCTATATGTTCTAGGGCATTCCAATCATGAACAAATTGAAATGAGCTATT
TCTTTTAGTCAACGTATGAAATCATTTATCAAATAAACGTAGAAATTTACTGTTATTGATGTCCCCGTGCCTGCTAAAGAATACCGCAGTCCATCACCATCTAAAAAGAAATTTGTGTTATTTGTTATGAAGCCCCTACCAGATATTACGCTCCATTACATCGATCATATTTATTCTCATTTGCCGAAGTTCTGAGTATC
AATTAACCAAAAAAAAATCCAATTCTAATATTGGCAGATGAACATTGACATCATTTGAGTTATAAGTGAATGAGGAATTTATTGGAACTTTTATACTAATATGATAGAAAATGCCCGGGGTAATTGCAACGTGTGTGGTTGCAAGCTCGCATTCCTTGC
Intron 4 GTATGATTCC ... ATTATTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 28.16 | 74 | 14 | 29 |
| A2 | 25.33 | 56 | 8.5 | 19 |
| A3 | 19.72 | 57 | 6 | 14 |
| A4 | 19.18 | 59 | 10 | 14 |
| A5 | 25 | 15 | 2 | 5 |
| A6 | 18.91 | 253 | 25 | 59 |
| A7 | 18.45 | 274 | 42 | 62 |
| A8 | 24.06 | 382 | 32.5 | 121 |
| A9 | 22.06 | 272 | 30 | 77 |
| A10 | 19.6 | 242 | 31 | 59 |
>TRINITY_DN38801_c0_g1_i2 from sample A7 / Example spliced isoformAAAATATTTACTTAAAAACGGGAACGAATGTAAGAGTACAATCAATGTGGAGTGGGCGGAGCTTACTATGAGCAGCGAGCATTGTAATCATCGAAACATTTTTCATATTCATACTCTCCATCCACATCTTTCCTTGCACATCGATCGAGCAACAGATTCGTAGGACTTGCAGGTTTCCAGGGCATCCTGCAAATCTGTGA
AAGAAAATGGAGACAATAAGTTTATCCAAGTCCTTTTGCTCAGTTCGGGCCCCAGCTGCTGTGGCCACTTCGAGTGGCAATAAGTCAAAGTCTTGCCATTCTAATGGACTGAGCTACCCACTTAGAGGGTCGACCAAAGGTATCAGGAGTGCAAGCTGCAGCTTTTTGAGTGGGAGTGAAACCGATGTCTTCAGACATGC
TGTTCGCGCGATTGGTAAGTCAAAAACTGGTGGCGGAGCCCTTAGCTGTACATGTGACTACCAGAAGATCCTCATTGCAAACAGGGGGGAAATCGCTGTTCGCGTGATTCGCACAGCACATGAAATGGGCATTCAGTGTGTGGCGGTACACTCTACAGTAGATAAGCAAGCACTCCATGTTCAAATCGCAGACGAGGCCG
TATGCATTGGAGAGGCACCGAGCAGTCAATCATATTTAGTTATCCCAAATATTGTAGCAGCTGCAGTGAGCCGTGGCTGTACCATGCTACACCCTGGATATGGTTTTCTTTCTGAAAATGCTAGCTTTGTGGACATCTGTAAAGAGCATGGAATCAACTTTATTGGGCCAAGTCCAGACAGCATTCGTGTTATGGGTGAC
AAAGCAACAGCTCGGGAAACAATGAAAAAAGCTGGGGTTCCAACTGTACCAGGAAGTGATGGGCTTTTAGAGTCAACAGAAGAGGCTATCACGGTTGCTAATGAGATTGGTTTTCCAGTAATGATCAAGGCAACTGCAGGTGGTGGAGGTCGTGGAATGCGATTGGCCAATGAACCAGGAGAGTTCGTGAAGTTATTACA
GCAAGCCAAGAGTGAGGCAGGTGCAGCCTTTGGGAATGATGGCGTTTATTTGGAGAGGTACATAAAAAACCCTAGACATATTGAGTTCCAGATTCTTGCAGACAAACATGGTAATTGTATCCACTTTGGAGAGCGTGATTGCAGTATTCAGCGGAGGAATCAAAAGCTTCTAGAGGAAGCACCATCTCCTGCTTTGACCT
CTGAGCTAAGAAGTGCCATGGGGGATGCTGCGGTTGCAGCTGCTTTATCTATAGGATATATTGGGGTTGGCACCGTTGAATTTCTTCTAGATGAAAGTGGTGACTTCTATTTCATGGAGATGAACACTAGGATCCAGGTGGAGCATCCAATAACTGAAATGATCTCCTCCACTGATTTAATTGAGGAACAAATTCGTGTT
GCACTAGGAGAGAAGCTTCGAATGAAACAGGAAGATGTGGTGTTGAGAGGACACTCCATTGAATGCAGAATCAATGCTGAGGATGCTTTCCAAGGATTTCGCCCAGGGCCAGGTAGGATAACAGGTTACTTGCCACCAGGAGGTCCATTTGTGCGAATGGATAGCCACATTTATTCCGATTACGTAGTTCCTCCAAGCTA
TGACTCTCTATTAGGAAAGCTTATCGTCTGGGCACCTACTAGAGAGAAGGCAATCGCACGTATGCAAAGAGCTCTTAATGAAACTATTATAGTAGGAATACCTACTACCATTGACTATCATAAACTTATCCTAGAAACTCAGGACTTCAAGGATGGAAAAATTGATACAGCATTCATTCCCAAACATGAAGAGGAGTTGG
CTTCTCCTCATGATGCTGTGCAAGTGCCTGTACCCACGAAGAGCGCTGTTAAAGCACTTGCTTGAATTCAAAGTTTCATGATGTGAGTTTAGTTATCAGGGTTGATTGTTTTGGTCGCAGAAACAGGCCTGCAGAATAGTGAAATTGCTCCTAATATTGTAGCCTATGATGGTTTATGCAGAAGCCACTTAATAATTGAC
AAGCTTGTCTGATTTAAAAGCCAAGCTCCTGTCGTTGCATTTTTATTCCAGAGGTTATTATGTAATTGATTCAACATCATTGTTCCTAACAATATGGCTTTTATGGCTATATGTTCTAGGGCATTCCAATCATGAACAAATTGAAATGAGCTATTTCTTTTAGTCAACGTATGAAATCATTTATCAAATAAACGTAGAAA
TTTACTGTTATTGATGTCCCCGTGCCTGCTAAAGAATACCGCAGTCCATCACCATCTAAAAAGAAATTTGTGTTATTTGTTATGAAGCCCCTACCAGATATTACGCTCCATTACATCGATCATATTTATTCTCATTTGCCGAAGTTCTGAGTATCAATTAACCAAAAAAAAATCCAATTCTAATATTGGCAGATGAACAT
TGACATCATTTGAGTTATAAGTGAATGAGGAATTTATTGGAACTTTTATACTAATATGATAGAAAATGCCCGGGGTAATTGCAACGTGTGTGGTTGCAAGCTCGCATTCCTTGCTCAACCATTGCCGATAATGTCAAATAGTGGTGAG
>TRINITY_DN38801_c0_g1_i1 from sample A7 / Example unspliced isoform:AAAATATTTACTTAAAAACGGGAACGAATGTAAGAGTACAATCAATGTGGAGTGGGCGGAGCTTACTATGAGCAGCGAGCATTGTAATCATCGAAACATTTTTCATATTCATACTCTCCATCCACATCTTTCCTTGCACATCGATCGAGCAACAGATTCGTAGGACTTGCAGGTTTCCAGGGCATCCTGCAAATCTGTGA
AAGAAAATGGAGACAATAAGTTTATCCAAGTCCTTTTGCTCAGTTCGGGCCCCAGCTGCTGTGGCCACTTCGAGTGGCAATAAGTCAAAGTCTTGCCATTCTAATGGACTGAGCTACCCACTTAGAGGGTCGACCAAAGGTATCAGGAGTGCAAGCTGCAGCTTTTTGAGTGGGAGTGAAACCGATGTCTTCAGACATGC
TGTTCGCGCGATTGGTAAGTCAAAAACTGGTGGCGGAGCCCTTAGCTGTACATGTGACTACCAGAAGATCCTCATTGCAAACAGGGGGGAAATCGCTGTTCGCGTGATTCGCACAGCACATGAAATGGGCATTCAGTGTGTGGCGGTACACTCTACAGTAGATAAGCAAGCACTCCATGTTCAAATCGCAGACGAGGCCG
TATGCATTGGAGAGGCACCGAGCAGTCAATCATATTTAGTTATCCCAAATATTGTAGCAGCTGCAGTGAGCCGTGGCTGTACCATGCTACACCCTGGATATGGTTTTCTTTCTGAAAATGCTAGCTTTGTGGACATCTGTAAAGAGCATGGAATCAACTTTATTGGGCCAAGTCCAGACAGCATTCGTGTTATGGGTGAC
AAAGCAACAGCTCGGGAAACAATGAAAAAAGCTGGGGTTCCAACTGTACCAGGAAGTGATGGGCTTTTAGAGTCAACAGAAGAGGCTATCACGGTTGCTAATGAGATTGGTTTTCCAGTAATGATCAAGGCAACTGCAGGTGGTGGAGGTCGTGGAATGCGATTGGCCAATGAACCAGGAGAGTTCGTGAAGTTATTACA
GCAAGCCAAGAGTGAGGCAGGTGCAGCCTTTGGGAATGATGGCGTTTATTTGGAGAGGTACATAAAAAACCCTAGACATATTGAGTTCCAGATTCTTGCAGACAAACATGGTAATTGTATCCACTTTGGAGAGCGTGATTGCAGTATTCAGCGGAGGAATCAAAAGCTTCTAGAGGAAGCACCATCTCCTGCTTTGACCT
CTGAGCTAAGAAGTGCCATGGGGGATGCTGCGGTTGCAGCTGCTTTATCTATAGGATATATTGGGGTTGGCACCGTTGAATTTCTTCTAGATGAAAGTGGTGACTTCTATTTCATGGAGATGAACACTAGGATCCAGGTGGAGCATCCAATAACTGAAATGATCTCCTCCACTGATTTAATTGAGGAACAAATTCGTGTT
GCACTAGGAGAGAAGCTTCGAATGAAACAGGAAGATGTGGTGTTGAGAGGACACTCCATTGAATGCAGAATCAATGCTGAGGATGCTTTCCAAGGATTTCGCCCAGGGCCAGGTAGGATAACAGGTTACTTGCCACCAGGAGGTCCATTTGTGCGAATGGATAGCCACATTTATTCCGATTACGTAGTTCCTCCAAGCTA
TGACTCTCTATTAGGAAAGCTTATCGTCTGGGCACCTACTAGAGAGAAGGCAATCGCACGTATGCAAAGAGCTCTTAATGAAACTATTATAGTAGGAATACCTACTACCATTGACTATCATAAACTTATCCTAGAAACTCAGGACTTCAAGGATGGAAAAATTGATACAGCATTCATTCCCAAACATGAAGAGGAGTTGG
CTTCTgtatgattcccatcatattatttgccatgtttaatttttttctttttgtttagtttttatgcattaagaattcatttttgtggcacactctgcaatttttgttcattcaaaggaaatgtggggaccacacaaaggtaaaatagccatcatatgtggattctcattcttggtttcttatgttctatctctggatgt
ctaatttcaattgcatttattattgcagCCTCATGATGCTGTGCAAGTGCCTGTACCCACGAAGAGCGCTGTTAAAGCACTTGCTTGAATTCAAAGTTTCATGATGTGAGTTTAGTTATCAGGGTTGATTGTTTTGGTCGCAGAAACAGGCCTGCAGAATAGTGAAATTGCTCCTAATATTGTAGCCTATGATGGTTTAT
GCAGAAGCCACTTAATAATTGACAAGCTTGTCTGATTTAAAAGCCAAGCTCCTGTCGTTGCATTTTTATTCCAGAGGTTATTATGTAATTGATTCAACATCATTGTTCCTAACAATATGGCTTTTATGGCTATATGTTCTAGGGCATTCCAATCATGAACAAATTGAAATGAGCTATTTCTTTTAGTCAACGTATGAAAT
CATTTATCAAATAAACGTAGAAATTTACTGTTATTGATGTCCCCGTGCCTGCTAAAGAATACCGCAGTCCATCACCATCTAAAAAGAAATTTGTGTTATTTGTTATGAAGCCCCTACCAGATATTACGCTCCATTACATCGATCATATTTATTCTCATTTGCCGAAGTTCTGAGTATCAATTAACCAAAAAAAAATCCAA
TTCTAATATTGGCAGATGAACATTGACATCATTTGAGTTATAAGTGAATGAGGAATTTATTGGAACTTTTATACTAATATGATAGAAAATGCCCGGGGTAATTGCAACGTGTGTGGTTGCAAGCTCGCATTCCTTGCTCAACCATTGCCGATAATGTCAAATAGTGGTGAG