NA ----> NA
Intron 1 GTAGGTATTA ... GCTAATGTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | -1 | 0 | 0 | 0 |
| A2 | 25 | 9 | 2 | 4 |
| A3 | 100 | 0 | 5 | 3 |
| A4 | 42.86 | 10 | 4 | 11 |
| A5 | 100 | 0 | 3 | 0 |
| A6 | 0 | 1 | 0 | 0 |
| A7 | 33.33 | 8 | 3 | 5 |
| A8 | 50 | 1 | 0 | 2 |
| A9 | 17.65 | 7 | 0 | 3 |
| A10 | 31.03 | 10 | 2 | 7 |
>TRINITY_DN47667_c0_g2_i2 from sample A10 / Example spliced isoformGGGAAGCGAAGAAAAAAATTCCAAATAAATATATAAATACATCGGAGCGAGAGATGGGCTCAAGAAAATCCAAATAAGTGTATATAAATAACTATATCAGAACCATAGATGGCCTCGGAGGTCTGACAGTAGCGAGTTTGGAAGTCGGTGTCTCGGCTGCTTTTTTGGATAACTGGCGATGATGCACCTTGGATGGCACC
CATTAGATTAGTCTGACACGGCCTTGATTGCATCAACTTCTATGGATTCAAGTGCAGTTTCCCTTGTCAAGAACCCTCATAAAGCTGATTTTGATTTTCGAGGAGTGATCGGCAAATGCGTGATATCTTGCCCATCTACAATCTCTGCTAATGCCCACAATCATTCCGATTTGGATGATGCCGAGCATATAATGGATTAT
GGTCCTTCAACACCAATGCACCAAACACCAAGTCCAAAGACTATACCTACAGATACACCAGAGTCTATGTATTCTCAACCATCTCTTTTGTTATCAACAAGTTCAAGTCCCCAGGGGGACAAAGAGGTTCAAGTGCAGAAGGTAAGCTACTCAGATACTGACATGGAATCTGCTTTGGAAGGTGCAATGCATCATGAATG
CAGAAAAATAATATCAGAAGTAGATCAAAAGATACCAGATCCTCATAAACAAAACTTTCTTACACTCTCCTTAACTAGGCCTAACAGGGAGCAGCAGTCAGTGAAGAAGTCTGACAGCAAAGTGGGCAATTTAGGTGCAGAAAACCTTTCACTCCAGAATATGTATCCAGCATCATCTCAGGCATGTATTTCTCTGCATG
GCGACACAGAAAGTATGGGCGGCAGTCTGGAATCTTCAAGAACCATGTCTACAAGAATAAATTCTGACAAGTGTATCCATTCACCTCAAGAAAATGGGCAGAAGATTTTGTGTACAAACAACTTGCAAGAGGAAGAAACCACAG
>TRINITY_DN47667_c0_g2_i4 from sample A10 / Example unspliced isoform:GGGAAGCGAAGAAAAAAATTCCAAATAAATATATAAATACATCGGAGCGAGAGATGGGCTCAAGAAAATCCAAATAAGTGTATATAAATAACTATATCAGAACCATAGATGGCCTCGGAGGTCTGACAGTAGCGAGTTTGGAAGTCGGTGTCTCGGCTGCTTTTTTGGgtaggtattaatttttgaaattttgagattag
tgttccttctgttttcccaacggtaacactaagaaaagtcctggttttgctgcttttcatcggttcctcttctgccacactagattttcgtttcctggaacaatgggttccttgaagtttttccacaaacccatgtaattttcttttctgtattggtttaatgatcctgtattcctttctgatttccttattagttcaat
agattcactgtgatttgtttttgaagtgggtggtatgtctctgactgctcagtttcatgctctagcttgttttgtatttgcttttctggattttggccattctatgccattgacttttgttttgggccaaaggggatttctaggctttggggttctgtcattctggaccatgttccttgtctattttttcttgaaggggt
tttctgcattcagctcatacagtccgtcagtcaggtgtttgggtcactgctattgaataaaccgaatgctatttcaagacttgatgggtttatcaacttatctgtgcttatgctctggagataacacctgctaatgtagATAACTGGCGATGATGCACCTTGGATGGCACCCATTAGATTAGTCTGACACGGCCTTGATT
GCATCAACTTCTATGGATTCAAGTGCAGTTTCCCTTGTCAAGAACCCTCATAAAGCTGATTTTGATTTTCGAGGAGTGATCGGCAAATGCGTGATATCTTGCCCATCTACAATCTCTGCTAATGCCCACAATCATTCCGATTTGGATGATGCCGAGCATATAATGGATTATGGTCCTTCAACACCAATGCACCAAACACC
AAGTCCAAAGACTATACCTACAGATACACCAGAGTCTATGTATTCTCAACCATCTCTTTTGTTATCAACAAGTTCAAGTCCCCAGGGGGACAAAGAGGTTCAAGTGCAGAAGGTAAGCTACTCAGATACTGACATGGAATCTGCTTTGGAAGGTGCAATGCATCATGAATGCAGAAAAATAATATCAGAAGTAGATCAAA
AGATACCAGATCCTCATAAACAAAACTTTCTTACACTCTCCTTAACTAGGCCTAACAGGGAGCAGCAGTCAGTGAAGAAGTCTGACAGCAAAGTGGGCAATTTAGGTGCAGAAAACCTTTCACTCCAGAATATGTATCCAGCATCATCTCAGGCATGTATTTCTCTGCATGGCGACACAGAAAGTATGGGCGGCAGTCTG
GAATCTTCAAGAACCATGTCTACAAGAATAAATTCTGACAAGTGTATCCATTCACCTCAAGAAAATGGGCAGAAGATTTTGTGTACAAACAACTTGCAAGAGGAAGAAACCACAG