NA ----> NA
Intron 1 GTATCCTTTC ... CATATTAAAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 31.43 | 12 | 4 | 7 |
| A2 | 44.44 | 5 | 5 | 3 |
| A3 | 42.11 | 11 | 8 | 8 |
| A4 | 47.37 | 10 | 16 | 2 |
| A5 | 20 | 6 | 1 | 2 |
| A6 | 33.33 | 2 | 1 | 1 |
| A7 | 36.59 | 13 | 5 | 10 |
| A8 | 57.89 | 4 | 10 | 1 |
| A9 | 33.33 | 10 | 5 | 5 |
| A10 | 50 | 2 | 2 | 2 |
>TRINITY_DN117394_c1_g3_i5 from sample A3 / Example spliced isoformAATTATTCCATCCGCTCTGCACAAAACTCACATGTGGAGGGTTCGACTCGCGGCCGGGAATGCAAGCATGGCTGTAAATGTATCCATCGCGGACTCGCGTTTAAAGCTCAGCCGAAGCTGAATTTCTGTCTCCTGGTAGAGTGACATTTTCGTAGGGACGAAGGATTAAATAGAGAAAATGGATTCAGTTCGGAAGCAAT
TGGATGCTTTAATGGGAACCAATCGCAACGGGGACGTAACAGAAATCAAACGCAACTATTATGATAGGGAAGTTTGCCGTCACTACTTAGCTGGACTTTGTCCTCACGACCTCTTTCAATTGACTAAAATGGATTTAGGTGCTTGCCAAAAAGTCCACTCCTTGGAACTACGAAAAGAATATGAAAGTGCTAAGGTAAAA
GGTAAAGATAATTATGACAGAGATCTGGAAGATGTTCTTGAAAGGCATATTGGTGAGTGCGACAGGAAAATTACAAGAGCCCTAAGACGTCTAGAGGACGATGATGCTAAGGCTGCAACTGCAATATCTGTGTCTGCAGTTACACAGTCCCCTGAGGTGGATGAATACACAAAACAAATCAAGGAGAAGCTGAAAGAGGC
CGAATATCTAGACTTGGAAGGGAGAAGTGATGATAAGATAAGAATTATGGAGCTAGTTGAGGAATTGAGAGCAAAACGAGCAGATAAACAAGCTGTGCTGCTTTTGGAGGCTTTTAATAAAGACAGAGCATCAATGCCACAACCAATCCAAACTCCTCCACCATTGGCTCCTTTGCCAATGCCAGGGCCCACTGATGCAC
GCACCCAAGAAATGATCATAGAGAGGCTTAGGAAGGCTGAAGAACTTGGAGAATTGGGGAGAGTGGATGAAGCACAGAAGTTTATGGAAGAGGCAGAAGCTCTTAAAAAGCTTGGAGCAAGGCAGGAAGTAGCAGCAGACTCATCAAAGCTTGCAGCTGTTGATGTTCGCATTGTGAGTTCAATTTTTTAATTTTTGATT
CATCCAAGTTTTAGTCACGAATAACTAGTCATTTCAAATCTGGAATTCTCTGCTTTCTGCCTTTCTTTTAACATTGGATCTAAAATTCTAAATATAATACAGAGGCTGGGTTATCGGGATGTTGCATTTGAAGCTCATGCAATTTGATGTAACATATATATATATGTGTGTGTGGCACTCAACTTAAGATATATATGGGG
TTAAATGTGATTTGGATATATGAATGTATTGGG
>TRINITY_DN117394_c1_g3_i7 from sample A3 / Example unspliced isoform:AATTATTCCATCCGCTCTGCACAAAACTCACATGTGGAGGGTTCGACTCGCGGCCGGGAATGCAAGCATGGCTGTAAATGTATCCATCGCGGACTCGCGTTTAAAGCTCAGCCGAAGCTGAATTTCTGTCTCCTGGTAGAGTGACATTTTCGTAGGGACGAAGGATTAAATAGAGAAAATGGATTCAGTTCGGAAGCAAT
TGGATGCTTTAATGGGAACCAATCGCAACGGGGACGTAACAGAAATCAAACGCAACTATTATGATAGGGAAGTTTGCCGTCACTACTTAGCTGGACTTTGTCCTCACGACCTCTTTCAATTGACTAAAATGGATTTAGGTGCTTGCCAAAAAGTCCACTCCTTGGAACTACGAAAAGAgtatcctttcactttgttaaaa
tggattttcttttctgtcttatggtgttgtttactctgagcagcttcttctgatttttttctcatctaccaatacatttgtgtttgatacttgtttaaacactccttggtttgccttttgaatgctttatctgcaatttgtattgaaactgaatttagtatcagttatatcttttacatattaaagATATGAAAGTGCTA
AGGTAAAAGGTAAAGATAATTATGACAGAGATCTGGAAGATGTTCTTGAAAGGCATATTGGTGAGTGCGACAGGAAAATTACAAGAGCCCTAAGACGTCTAGAGGACGATGATGCTAAGGCTGCAACTGCAATATCTGTGTCTGCAGTTACACAGTCCCCTGAGGTGGATGAATACACAAAACAAATCAAGGAGAAGCTG
AAAGAGGCCGAATATCTAGACTTGGAAGGGAGAAGTGATGATAAGATAAGAATTATGGAGCTAGTTGAGGAATTGAGAGCAAAACGAGCAGATAAACAAGCTGTGCTGCTTTTGGAGGCTTTTAATAAAGACAGAGCATCAATGCCACAACCAATCCAAACTCCTCCACCATTGGCTCCTTTGCCAATGCCAGGGCCCAC
TGATGCACGCACCCAAGAAATGATCATAGAGAGGCTTAGGAAGGCTGAAGAACTTGGAGAATTGGGGAGAGTGGATGAAGCACAGAAGTTTATGGAAGAGGCAGAAGCTCTTAAAAAGCTTGGAGCAAGGCAGGAAGTAGCAGCAGACTCATCAAAGCTTGCAGCTGTTGATGTTCGCATTACTGATCAGAAGCTTCGAG
TATGTGATATTTGTGGTGCTTTCTTGAGCATATATGACAGGCGTATAATGCCTCCTCGTTACCAGCAGGCTTTGGGCCCAGTTTTTCGACAAAATCTTTTTGCAGCTTCAGAATTGATCGACGATTGGCTGATCATTTTGGAGGCAAACTGCATTTGGGATACATGCAAATCCGCCAAAAGTTAGCTGATCTTCAGGTGT
GTCTCCCTTCATGAATATTTTCAGCTTTCTTTCTTGTGCTGATACTGTACAGTGTATAGTTGCATTTAGAATTGCAGCATGTCCAATATTAAGATTGATAGATGAGAAGCATGTGGAGAAGATAGTGACATATATTTTTATCCAGTTCATGGTTCTGACAATAGATTGGGCTTCTGATAAAATGATCTTACGTGCATTTC
TGCTTTTAGCAGTGGCTATGATTCTTATTAGTGATGTAAAGCTTGTTTATTGAGTGCACCTATATGGTGATTATTTTTCAGTTTTTTTAAATTATTAGTCCAGGATGATATAATTTGCC