sp|Q6K4T4|SERK4_ORYSJ ----> LRR receptor kinase SERK2
Intron 1 GTGAGGCGCT ... ATCCATGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 53.27 | 25 | 28 | 29 |
| A2 | 68.97 | 9 | 20 | 20 |
| A3 | 70.49 | 9 | 27 | 16 |
| A4 | 67.65 | 11 | 20 | 26 |
| A5 | 72.41 | 4 | 11 | 10 |
| A6 | 52.54 | 14 | 21 | 10 |
| A7 | 76.19 | 15 | 44 | 52 |
| A8 | 60.87 | 9 | 14 | 14 |
| A9 | 69.6 | 19 | 47 | 40 |
| A10 | 89.58 | 5 | 38 | 48 |
>TRINITY_DN123142_c2_g2_i9 from sample A1 / Example spliced isoformCTTTGGTCGGTTGTTTGACCCGGGTAACAGGTTAAATTTTTGCGGCCCTGGCAGCGGAGACGGCGCTGAATGTGGTTAAAGTTAAAAGTCATAATCGATTTTGGCGTGATCGAGCGGCCGTAGGAGCATGCGGTTGGATTCTGTACCGTCCGATCTGGCGAAACAGCGAGTGGACGGGAAAGCCGCCTTTTCGCCCTGCC
ATTCAAGCACGACACACGAAGCTGTCTTTGGAATTCCTGCTCCCTTCGATGGACTTTCCATGAGACTCGTGATCGAATCCAGCTGAGTCCATCCCCTGGCCTTGAAAAAGATCGCCTGCGCTCCGGTCTTCGGCATCGATGTAAACGGAAGATTTGCAGCATGGCTGTCATCGCGGTCAGCGCCTGGGATGAAAGCTAAC
GGTGGCACGAAAGGACATTGAGAAACACATCTACAAAAATGAAGTGTCTTGTGTTCGTGCTTGTGCTTTTGTCAATTGCATGGTCTACTGGTGCGTCAAATGCTGAAGCAGCTGGTCCCATGTCAGTTGTGTTAGTGGTCATGTTGCAACTGTCACTTTGGCCAACATGAGCTTTTCAGGGACCATATCACCTCGGATTG
GCCAGCTGAAGTTCCTGACTTACCTGACATTAGAAGGTAATTCATTAACAGGAGAAATACCACCTCAACTTGGGAACATGACTGCTCTACAGAATCTGAATTTGGAAAGCAACCGATTCACAGGAGAGATACCAAGTACTCTGGGCCAGCTTTCTAATCTTCAATACCTGGTGTTAGGCAACAACAGGCTCAGTGGAGAG
ATTCCACTTTCTATATCGAAGATTCCAAATTTAATAGAATTGGACCTTTCTTCTAATAACCTCAGTGGACAAATACCAGCATCTTTGTTTCAAGTACATAAATATAATTTCAGTGGTAATCATCTTAATTGCAGTGCAAGTTCTCCACACCCTTGTGCCTCGGCTTCCTCTTCAAATTCAGGTTCCTCAAGGAGATCAAA
GATTGGAATTTTGGCTGGTACAATTGGAGGAGGAGTGGTTATCATTTTGGTCCTAGGCATACTTCTCCTTTTATGCCAAGGTCGACATCGAGGCAATAAGAGTGAAGTTTTTGTTGATGTCTCTGGTGAGGATGATCGGAAAATTGCTTTTGGTCAGTTAAAGAGATTTTCCTGGCGTGAGTTGCAGCTGGCGACAGATA
ATTTTAGTGAAAAGAATGTTCTTGGGCAGGGAGGTTTTGGCAAAGTATATAAAGGAGTGCTTCATGACAATATAAAGGTTGCAGTAAAACGGTTGACTGACTATCATAGCCCTGGTGGAGAGGCAGCATTTCTACGGGAGGTTGAGATGATCAGTGTGGCAGTCCACCGCAACCTTCTGCGCTTGATAGGATTTTGTGTT
GCACCATCAGAACGGCTGCTAGTCTATCCATATATGCAAAACCTTAGTGTTGCATACAGGCTAAGGGAGCTCAAACCTACGGAAAAGCCATTGGACTGGCCTGCTCGGAAAAATGTGGCTTTAGGTGCAGCTCGTGGTTTGGAGTACCTTCATGAGCACTGCAATCCTAAAATTATTCATCGGGATGTGAAAGCTGCTAA
TGTCTTGCTAGATGAAGGTTTTGAAGCTGTTGTTGGTGATTTTGGCCTAGCGAAGTTGGTTGATGCTAGGAAAACTCATGTTACAACTCAAGTGCGTGGAACCATGGGTCACATTGCTCCTGAATACTTATCAACTGGAAGATCCTCAGAGAGGACAGATGTGTTTGGATATGGTATTACACTTTTAGAGCTTGTTACTG
GACAACGTGCTATAGACTTTTCACGTCTTGAGGAAGAGGATGACGTTCTATTATTGGACCACGTTAAAAAGTTACAAAGAGAGAAAAGATTAGATGCTATTGTAGATGGAAACCTAAAGCAGAACTATGATGCAAAGGAAGTTGAGGCAATGATTCAGGTAGCATTGTTGTGCACACAGACCTCACCAGAAGATCGACCC
AAAATGACGGAAGTAGTGCGCATGTTGGAAGGAGAGGGTTTGGATGAACGTTGGGAAGAGTGGCAGCAGGTTGAAGTCATTCGTCGACAAGAATATGAAATGATGCCTCGAAGATTTGAATGGGCTGAGGATTCTATATATAATCAGGATGCAATCGAACTCTCTGGTGGAAGATGATCAACATGGGCATTGATGTGTCA
TGATTTGTAACTTGGAACAGTTTACACTTTTTTTCAAATATATCATTATTGGAACCGTAAAAAAGGTTTCTCGAGGTCAGCAGACTTTATTTACTTATTCTTTCACTTCTGTAGACAAGGTGACTGCTTGTACAACAATATTCAGATGGGTTTTAAATCCTTGCTTCATCAATTGGGAATCTCCTGCAGAAATCATGCTT
TTGTCCATTTGCAATGGTGTGTATGGTAGATTCACCTCAGTATCCTCGAACATCTGAATAGCAAGAAATCCTTGACTTTCGTTACCCTGGAAAGATGTGTATTATACTATTATGATAGGGAAATTATAACCAACATTATTCTAGTGTTTGTATCTATCATGGAGTACTATTCTCCAAAGCAAGTTGTTTGAATTGGAATA
ATTCCTTGATGTAATGTGAAAAGATAGAAGTAAATGTTTCTCCTTTG
>TRINITY_DN123142_c2_g2_i11 from sample A1 / Example unspliced isoform:CTTTGGTCGGTTGTTTGACCCGGGTAACAGGTTAAATTTTTGCGGCCCTGGCAGCGGAGACGGCGCTGAATGTGGTTAAAGTTAAAAGTCATAATCGATTTTGGCGTGATCGAGCGGCCGTAGGAGCATGCGGTTGGATTCTGTACCGTCCGATCTGGCGAAACAGCGAGTGGACGGGAAAGCCGCCTTTTCGCCCTGCC
ATTCAAGCACGACACACGAAGCTGTCTTTGGAATTCCTGCTCCCTTCGATGGACTTTCCATGAGACTCGTGATCGAATCCAGCTGAGTCCATCCCCTGGCCTTGAAAAAGATCGCCTGCGCTCCGGTCTTCGGCATCGATGTAAACGGAAGATTTGCAGCATGGCTGTCATCGCGGTCAGCGCCTGGGATGAAAGCTAAC
GGTGGCACGAAAGGACATTGAGAAACACATCTACAAAAATGAAGTGTCTTGTGTTCGTGCTTGTGCTTTTGTCAATTGCATGGTCTACTGGTGCGTCAAATGCTGAAGgtgaggcgctaaatgcattcaaacaatcattgaatgattccaataattcgcttagtgattggaatgttgatttagtcgatccatgcagCAGC
TGGTCCCATGTCAGTTGTGTTAGTGGTCATGTTGCAACTGTCACTTTGGCCAACATGAGCTTTTCAGGGACCATATCACCTCGGATTGGCCAGCTGAAGTTCCTGACTTACCTGACATTAGAAGGTAATTCATTAACAGGAGAAATACCACCTCAACTTGGGAACATGACTGCTCTACAGAATCTGAATTTGGAAAGCAA
CCGATTCACAGGAGAGATACCAAGTACTCTGGGCCAGCTTTCTAATCTTCAATACCTGGTGTTAGGCAACAACAGGCTCAGTGGAGAGATTCCACTTTCTATATCGAAGATTCCAAATTTAATAGAATTGGACCTTTCTTCTAATAACCTCAGTGGACAAATACCAGCATCTTTGTTTCAAGTACATAAATATAATTTCA
GTGGTAATCATCTTAATTGCAGTGCAAGTTCTCCACACCCTTGTGCCTCGGCTTCCTCTTCAAATTCAGGTTCCTCAAGGAGATCAAAGATTGGAATTTTGGCTGGTACAATTGGAGGAGGAGTGGTTATCATTTTGGTCCTAGGCATACTTCTCCTTTTATGCCAAGGTCGACATCGAGGCAATAAGAGTGAAGTTTTT
GTTGATGTCTCTGGTGAGGATGATCGGAAAATTGCTTTTGGTCAGTTAAAGAGATTTTCCTGGCGTGAGTTGCAGCTGGCGACAGATAATTTTAGTGAAAAGAATGTTCTTGGGCAGGGAGGTTTTGGCAAAGTATATAAAGGAGTGCTTCATGACAATATAAAGGTTGCAGTAAAACGGTTGACTGACTATCATAGCCC
TGGTGGAGAGGCAGCATTTCTACGGGAGGTTGAGATGATCAGTGTGGCAGTCCACCGCAACCTTCTGCGCTTGATAGGATTTTGTGTTGCACCATCAGAACGGCTGCTAGTCTATCCATATATGCAAAACCTTAGTGTTGCATACAGGCTAAGGGAGCTCAAACCTACGGAAAAGCCATTGGACTGGCCTGCTCGGAAAA
ATGTGGCTTTAGGTGCAGCTCGTGGTTTGGAGTACCTTCATGAGCACTGCAATCCTAAAATTATTCATCGGGATGTGAAAGCTGCTAATGTCTTGCTAGATGAAGGTTTTGAAGCTGTTGTTGGTGATTTTGGCCTAGCGAAGTTGGTTGATGCTAGGAAAACTCATGTTACAACTCAAGTGCGTGGAACCATGGGTCAC
ATTGCTCCTGAATACTTATCAACTGGAAGATCCTCAGAGAGGACAGATGTGTTTGGATATGGTATTACACTTTTAGAGCTTGTTACTGGACAACGTGCTATAGACTTTTCACGTCTTGAGGAAGAGGATGACGTTCTATTATTGGACCACGTAAAAATTTTAAACCTTGCATTTCCTTTTTCTTGAAAATATTATCATTG
GTATATCTTTCAATCCTGATTACCACCTATTACCTGTCTGTTAAATAATGTGCC
Intron 2 GTGAGGCGCT ... GTTGATTTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 52.38 | 25 | 28 | 27 |
| A2 | 78.26 | 5 | 20 | 16 |
| A3 | 71.58 | 9 | 27 | 18.3 |
| A4 | 75 | 7 | 20 | 22 |
| A5 | 76 | 3 | 11 | 8 |
| A6 | 56.36 | 12 | 21 | 10 |
| A7 | 71.61 | 19 | 44 | 51.8 |
| A8 | 50.88 | 14 | 14 | 15 |
| A9 | 72.36 | 17 | 47 | 42 |
| A10 | 88.12 | 6 | 38 | 51 |
>TRINITY_DN103548_c2_g1_i8 from sample A4 / Example spliced isoformATTCTGTACCGTCCGATCTGGCGAAACAGCGAGTGGACGGGAAAGCCGCCTTTTCGCCCTGCCATTCAAGCACGACACACGAAGCTGTCTTTGGAATTCCTGCTCCCTTCGATGGACTTTCCATGAGACTCGTGATCGAATCCAGCTGAGTCCATCCCCTGGCCTTGAAAAAGATCGCCTGCGCTCCGGTCTTCGGCATC
GATGTAAACGGAAGATATTGCAGCATGGCTGTCATCGCGGTCAGCGCCTGGGATGAAAGCTAACGGTGGCACGAAAGGACATTGAGAAACACATCTACAAAAATGAAGTGTCTTGTGTTCGTGCTTGTGCTTTTGTCAATTGCATGGTCTACTGGTGCGTCAAATGCTGAAGTCGATCCATGCAGCAGCTGGTCCCATGT
CAGTTGTGTTAGTGGTCATGTTGCAACTGTCACTTTGGCCAACATGAGCTTTTCAGGGACCATATCACCTCGGATTGGCCAGCTGAAGTTCCTGACTTACCTGACATTAGAAGGTAATTCATTAACAGGAGAAATACCACCTCAACTTGGGAACATGACTGCTCTACAGAATCTGAATTTGGAAAGCAACCGATTCACAG
GAGAGATACCAAGTACTCTGGGCCAGCTTTCTAATCTTCAATACCTGGTGTTAGGCAACAACAGGCTCAGTGGAGAGATTCCACTTTCTATATCGAAGATTCCAAATTTAATAGAATTGGACCTTTCTTCTAATAACCTCAGTGGACAAATACCAGCATCTTTGTTTCAAGTACATAAATATAATTTCAGTGGTAATCAT
CTTAATTGCAGTGCAAGTTCTCCACACCCTTGTGCCTCGGCTTCCTCTTCAAATTCAGGTTCCTCAAGGAGATCAAAGATTGGAATTTTGGCTGGTACAATTGGAGGAGGAGTGGTTATAATTTTGGTCCTAGGCATACTTCTCCTTTTATGCCAAGGTCGACATCGAGGCAATAAGAGTGAAGTTTTTGTTGATGTCTC
TGGTGAGGATGATCGGAAAATTGCTTTTGGTCAGTTAAAGAGATTTTCCTGGCGTGAGTTGCAGCTGGCGACAGATAATTTTAGTGAAAAGAATGTTCTTGGGCAGGGAGGTTTTGGCAAAGTATATAAAGGAGTGCTTCATGACAATATAAAGGTTGCAGTAAAACGGTTGACTGACTATCATAGCCCTGGTGGAGAGG
CAGCATTTCTACGGGAGGTTGAGATGATCAGTGTGGCAGTCCACCGCAACCTTCTGCGCTTGATAGGATTTTGTGTTGCACCATCAGAACGGCTTCTAGTCTATCCATATATGCAAAACCTTAGTGTTGCATACAGGCTAAGGGAGCTCAAACCTACGGAAAAGCCATTGGACTGGCCTGCTCGGAAAAATGTGGCTTTA
GGTGCAGCTCGTGGTTTGGAGTACCTTCATGAGCACTGCAATCCTAAAATTATTCATCGGGATGTGAAAGCTGCTAATGTCTTGCTAGATGAAGGTTTTGAAGCTGTTGTTGGTGATTTTGGCCTAGCGAAGTTGGTTGATGCTAGGAAAACTCATGTTACAACTCAAGTGCGTGGAACCATGGGTCACATTGCTCCTGA
ATACTTATCAACTGGAAGATCCTCAGAGAGGACAGATGTGTTTGGATATGGTATTACACTTTTAGAGCTTGTTACTGGACAACGTGCTATAGACTTTTCACGTCTTGAGGAAGAGGATGACGTTCTATTATTGGACCACGTTAAAAAGTTACAAAGAGAGAAAAGATTAGATGCTATTGTAGATGGAAACCTAAAGCAGA
ACTATGATGCAAAGGAAGTTGAGGCAATGATTCAGGTAGCATTGTTGTGCACACAGACCTCACCAGAAGATCGACCCAAAATGACGGAAGTAGTGCGCATGTTGGAAGGAGAGGGTTTGGATGAACGTTGGGAAGAGTGGCAGCAGGTTGAAGTCATTCGTCGACAAGAATATGAAATGATGCCTCGAAGATTTGAATGG
GCTGAGGATTCTATATATAATCAGGATGCAATCGAACTCTCTGGTGGAAGATGATCAACATGGGCATTGATGTGTCATGATTTGTAACTTGGAACAGTTTACACTTTTTTTCAAATATATCATTATTGGAACCGTAAAAAAGGTTTCTCGAGGTCAGCAGACTTTATTTACTTATTCTTTCACTTCTGTAGACAAGGTGA
CTGCTTGTACAACAATATTCAGATGGGTTTTAAATCCTTGCTTCATCAATTGGGAATCTCCTGCAGAAATCATGCTTTTGTCCATTTGCAATGGTGTGTATGGTAGATTCACCTCAGTATCCTCGAACATCTGAATAGCAAGAAATCCTTGACTTTCGTTACCCTGGAAAGATGTGTATTATGATAGGGAAATTATAACC
AACATTATTCTAGTGTTTGTATCTATCATGGAGTACTATTCTCCAAAGCAAGTTGTTTGAATTGGAATAATTCCTTGATGTAATGTGAAAAGATAGAAGTAAATGTTTCCCCG
>TRINITY_DN103548_c2_g1_i13 from sample A4 / Example unspliced isoform:ATTCTGTACCGTCCGATCTGGCGAAACAGCGAGTGGACGGGAAAGCCGCCTTTTCGCCCTGCCATTCAAGCACGACACACGAAGCTGTCTTTGGAATTCCTGCTCCCTTCGATGGACTTTCCATGAGACTCGTGATCGAATCCAGCTGAGTCCATCCCCTGGCCTTGAAAAAGATCGCCTGCGCTCCGGTCTTCGGCATC
GATGTAAACGGAAGATTTGCAGCATGGCTGTCATCGCGGTCAGCGCCTGGGATGAAAGCTAACGGTGGCACGAAAGGACATTGAGAAACACATCTACAAAAATGAAGTGTCTTGTGTTCGTGCTTGTGCTTTTGTCAATTGCATGGTCTACTGGTGCGTCAAATGCTGAAGgtgaggcgctaaatgcattcaaacaatca
ttgaatgattccaataattcgcttagtgattggaatgttgatttagTCGATCCATGCAGCAGCTGGTCCCATGTCAGTTGTGTTAGTGGTCATGTTGCAACTGTCACTTTGGCCAACATGAGCTTTTCAGGGACCATATCACCTCGGATTGGCCAGCTGAAGTTCCTGACTTACCTGACATTAGAAGGTAATTCATTAAC
AGGAGAAATACCACCTCAACTTGGGAACATGACTGCTCTACAGAATCTGAATTTGGAAAGCAACCGATTCACAGGAGAGATACCAAGTACTCTGGGCCAGCTTTCTAATCTTCAATACCTGGTGTTAGGCAACAACAGGCTCAGTGGAGAGATTCCACTTTCTATATCGAAGATTCCAAATTTAATAGAATTGGACCTTT
CTTCTAATAACCTCAGTGGACAAATACCAGCATCTTTGTTTCAAGTACATAAATATAATTTCAGTGGTAATCATCTTAATTGCAGTGCAAGTTCTCCACACCCTTGTGCCTCGGCTTCCTCTTCAAATTCAGGTTCCTCAAGGAGATCAAAGATTGGAATTTTGGCTGGTACAATTGGAGGAGGAGTGGTTATAATTTTG
GTCCTAGGCATACTTCTCCTTTTATGCCAAGGTCGACATCGAGGCAATAAGAGTGAAGTTTTTGTTGATGTCTCTGGTGAGGATGATCGGAAAATTGCTTTTGGTCAGTTAAAGAGATTTTCCTGGCGTGAGTTGCAGCTGGCGACAGATAATTTTAGTGAAAAGAATGTTCTTGGGCAGGGAGGTTTTGGCAAAGTATA
TAAAGGAGTGCTTCATGACAATATAAAGGTTGCAGTAAAACGGTTGACTGACTATCATAGCCCTGGTGGAGAGGCAGCATTTCTACGGGAGGTTGAGATGATCAGTGTGGCAGTCCACCGCAACCTTCTGCGCTTGATAGGATTTTGTGTTGCACCATCAGAACGGCTTCTAGTCTATCCATATATGCAAAACCTTAGTG
TTGCATACAGGCTAAGGGAGCTCAAACCTACGGAAAAGCCATTGGACTGGCCTGCTCGGAAAAATGTGGCTTTAGGTGCAGCTCGTGGTTTGGAGTACCTTCATGAGCACTGCAATCCTAAAATTATTCATCGGGATGTGAAAGCTGCTAATGTCTTGCTAGATGAAGGTTTTGAAGCTGTTGTTGGTGATTTTGGCCTA
GCGAAGTTGGTTGATGCTAGGAAAACTCATGTTACAACTCAAGTGCGTGGAACCATGGGTCACATTGCTCCTGAATACTTATCAACTGGAAGATCCTCAGAGAGGACAGATGTGTTTGGATATGGTATTACACTTTTAGAGCTTGTTACTGGACAACGTGCTATAGACTTTTCACGTCTTGAGGAAGAGGATGACGTTCT
ATTATTGGACCACGTTAAAAAGTTACAAAGAGAGAAAAGATTAGATGCTATTGTAGATGGAAACCTAAAGCAGAACTATGATGCAAAGGAAGTTGAGGCAATGATTCAGGTAGCATTGTTGTGCACACAGACCTCACCAGAAGATCGACCCAAAATGACGGAAGTAGTGCGCATGTTGGAAGGAGAGGGTTTGGATGAAC
GTTGGGAAGAGTGGCAGCAGGTTGAAGTCATTCGTCGACAAGAATATGAAATGATGCCTCGAAGATTTGAATGGGCTGAGGATTCTATATATAATCAGGATGCAATCGAACTCTCTGGTGGAAGATGATCAACATGGGCATTGATGTGTCATGATTTGTAACTTGGAACAGTTTACACTTTTTTTCAAATATATCATTAT
TGGAACCGTAAAAAAGGTTTCTCGAGGTCAGCAGACTTTATTTACTTATTCTTTCACTTCTGTAGACAAGGTGACTGCTTGTACAACAATATTCAGATGGGTTTTAAATCCTTGCTTCATCAATTGGGAATCTCCTGCAGAAATCATGCTTTTGTCCATTTGCAATGGTGTGTATGGTAGATTCACCTCAGTATCCTCGA
ACATCTGAATAGCAAGAAATCCTTGACTTTCGTTACCCTGGAAAGATGTGTATTATGATAGGGAAATTATAACCAACATTATTCTAGTGTTTGTATCTATCATGGAGTACTATTCTCCAAAGCAAGTTGTTTGAATTGGAATAATTCCTTGATGTAATGTGAAAAGATAGAAGTAAATGTTTCCCCG