sp|Q8W234|SEUSS_ARATH ----> Transcriptional corepressor SEUSS
Intron 1 GTAGGGTTCT ... ATGGAAACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 26.96 | 42 | 18 | 13 |
| A2 | 23.53 | 26 | 6 | 10 |
| A3 | 26.44 | 32 | 14 | 9 |
| A4 | 32.2 | 20 | 8 | 11 |
| A5 | 16.98 | 22 | 7 | 2 |
| A6 | 20 | 6 | 2 | 1 |
| A7 | 24.39 | 31 | 13 | 7 |
| A8 | 23.08 | 15 | 2 | 7 |
| A9 | 20.55 | 29 | 7 | 8 |
| A10 | 17.24 | 24 | 8 | 2 |
>TRINITY_DN124929_c0_g1_i4 from sample A1 / Example spliced isoformGTTTGCTGGAGGGAGGGGGTGGCCGAGGAGGAGGAGGAGGAGGAGGGCCAGGCGACGGGCGACGGATTTAAAAGCAAATCAAGGCGGATCTTAGAAGGTTTCAGAGTCTCAGCTACTGTTTCTGGGCCTGCAAGTTTCGCGGGGTTTTGAACTCCTAACTTTCGGGCTTCGTCTCTGTGCCGATGCGCATTTGTTTTCCT
TCTGATCAAAGATGCGAACAGTAGTGAAAATTATGGATTTCAATAAATTATTTGCATGAAGGGTTAGCCTCGGTTTTTTTTTTTATTAATTAAGGGCACAGGGGTTTCGGTTGTGAATCGAGGACAGTGGCGGAGATATCAGTTGGCTGGGGTTTGGTGAAGGGAGACTGCTGCCGTCTGATGAGGCAGAAGATGATATT
TTAGAGCACTTGATTTATTGGATTTTTTATTTTATTTTATTTGGGAGGTATTTTAGAGATGGAGAGGTTCAACAGCGCCACATTATTGGATATTCGGCAGCTGAATCGGACCAACGCTGCCTTGCAATTCAGTCCCCAGATGGCTATGAGCAATGATAGTTTCTTGATGCTCGATTCGAACCCCAGTCCATCGTCCTCGA
TGGATCTCGGTAGCTTGAACCCATCTCTGTCTTCGAATATAACGTCGGAGTTCTCGTCTCTTCTTGAGTCCACTTCGCAGAATTCGATGAATGTGGGCATGGCGTCTAGTGCCGCAATGCCTTCTCAGCCACAGGCTGTTCAGCACAACGATATGCTGATGCCTGCCGACGAGTGGTCTGGGAACACCACGCCGAGTGCT
CAAAGTTCTCGGCAGGGATTTCAGAGTTCTTCCCCTAGTCAGTGCCAGAGTTCTGTTAGCCAAGGACAGGTCTCAAAGGCGGGGAACGTGGAGAATAACCGAATGCAACAATATGGTTATGATAAGCACCTGTGGGGCGGTTCCCAAAATGCTCATGAAATGTTTGGGATGCCGCAACAGATTAATCGAGACGGGATGTC
GCAAGCAGGTGATAATCAGTCGGCAATACGTGGACACCAACAAGGCTTCCAAGCAGAAATGAGGAAGCCAAACTTTTCTAGCAAGCAATCTGGCCAGGTACTGTCAGGTGTTTCTCAGCAATCTGGTTTTCAAAATCATGCTCAAGCTACTAACGGACAGGCCAGTTATTTACAACAACAAAGACTTTGTCATGGGAGTA
ATGCCTCAGATATATCTTCACAGGAATCAGCTTCCCAGGAAGTGAAAGGTGCTGTTCAACCAATGGACTTTGAACAGAATCAGGCAAGCCAGGTACCAAGTTTCGATGGGGCTACAAAAGTGAACATGCATGCGAGTAACCACTGTTTGCCGCAGCCTCCAGTTTATCAGAGGATGGAAATTGACAACCAGCCGCCAAGG
TTTCCAGGTATGCAGCCCACCAATCAACAAGCAATGTTCCAAAGAGGTCCTGCCCTTAGTCAGCCTCAGAAAGCTATGGACGGGCATAGGATGCAGCAATGTGAACTCCAAGGCGATCCTGTCATGCAGACCATGCGGAGTCTAGGATTTCAAATGCAAGGAATCAACCCTCAGAACACAATGCAAGGCCAGCTTCAAGA
GCAATACTTAAATGCAAATGGCCATCCATTATCGGTTATTCTTCAAAATCAGGCTCCTGCTCAAGGTCAATCCCAGATGCCAACAGTGCCCCAACGTCATGCCCAAAGCCAAGTGGCAAATCAGCAAGCTGCAGTCAATCAACAGGCAGTTTATCAAACTAGACATTTGCAGTCTGGGTCACATCAATCTCCATTTCAAA
CGAACCAGCAGGCTTCTTTTCATTTGGGTCAGCCTCAGGTAAACCAAGTGCACCAGCATGGTGGTAACCCTGGATCACATTTGGCAGGGATCCAACATCTTAGCCAACTTCAAGCAAGAGCACAGAACTCATTATTCCAGGGCGTAAAGATTGGGGGGCGGCACTTATTGCATGGATCACCCAGTGCCCCTGTAAGCTAT
GTTGGCAACGGCATTGATGCAGGAGTGCGAAGTCCAATGCCAGTAGCCGTTGTCTCGAGGTGTCTTGAGATTCTTATGCTTTATATTCAAGAACAGAGAAATCGACCACAGGATAATGGCATAGGATTTTGGAGGAAGCTTGTTCATGATTATTTTGCTCCTGGAGCAACAGAACGCTGGTGCTTATCAAGCTACAGCTC
TTCTCAAATGAGCAGGAATGCGCAAGGCTTGTTTCCAATGGATTATTGGTTCTGCAACATATGTGGAATGCAACCTGGGCGAGGATTTGAATATAGTACAGACGTCCTGCCAAGACTTTTCAAGATCAAGTACGACAGTGGGTTGTTGGAGGAGCTTTTATGCCTTGATATAGCTGAAGAGAGCTACATGGTTCCACCAG
GAAAATGTGTATTAGAGTTTCCACGTGCAGTTCACGAGTCTGTATTTCCTGAGCTACGGGTGGTTCGGTATGGAAAGTTGAGAGTCACATTCAATAGTTCTCTGAAGATATTATCCTGGGAATTCTGTGCTAGGGTGCATGATGAAGTTGTACCACGGAAGAATCTTATTCAGCAGGCGCAGCAGTTAACAAACTTAGTG
GAGGCTGAACATGAGGGTTCCGACAAGGATGCATCAAATTTGAAGGCTCAATGTAACGCGTTCACGTTTTGTGCAAAGCAGCTGAAGTCAAAGTTGGAATCCCCCAATGTAAATGATCTTGGCTTTTCAAAACGCTATGTCAGATGCTTACAGGTTCGTGATATATGCTCCATTCAGTTATAGGGGTTTGCATGATATGT
AGAGCAAGTATATCATATGAAGACTTCTTGGAGATGTAAAAGAACTTGATTCATTTTCTGAACACAACAAGGGTTTGAAAAGTAAAAATTGGGAAAATTTTGAAAGATTCCTCAAAATGTATTGCTGATTAATTTGTGATTCTGGTCTATATGTGTATGTATATGTATGTAGATAACTGAGGGACAAAGTATTCATAACT
TTCAAAAATAAAAAAAAATAAAACTGAAATATGAAACAGAATGGAGTTATTCATTCAACCATAACATGCATCTATTCCTAACTTTTCAAACTTAATTCACTTCAATATCCTTACATTTGTTGTGGATAGTTTAGAACATAGTGGAAAAAATCGGCATCGGCAAAAAATCGGCAAGGGTCCCGAATACAACTTCTCGGCAA
CATCGGCGAAAAAATCGGCAAAAATCGGC
>TRINITY_DN124929_c0_g1_i10 from sample A1 / Example unspliced isoform:GTTTGCTGGAGGGAGGGGGTGGCCGAGGAGGAGGAGGAGGAGGAGGGCCAGGCGACGGGCGACGGATTTAAAAGCAAATCAAGGCGGATCTTAGAAGGTTTCAGAGTCTCAGCTACTGTTTCTGGGCCTGCAAGTTTCGCGGGGTTTTGAACTCCTAACTTTCGGGCTTCGTCTCTGTGCCGATGCGCATTTGTTTTCCT
TCTGATCAAAGATGCGAACAGTAGTGAAAATTATGGATTTCAATAAATTATTTGCATGAAGGGTTAGCCTCGGTTTTTTTTTTTATTAATTAAGGGCACAGGGGTTTCGGTTGTGAATCGAGGACAGTGGCGGAGATATCAGTTGGCTGGGGTTTGGTGAAGGGAGACTGCTGCCGTCTGATGAGGCAGAAGATGATATT
TTAGAGCACTTGATTTATTGGATTTTTTATTTTATTTTATTTGGGAGGTATTTTAGAGATGGAGAGGTTCAACAGCGCCACATTATTGGATATTCGGCAGCTGAATCGGACCAACGCTGCCTTGCAATTCAGTCCCCAGATGGCTATGAGCAATGATAGTTTCTTGATGCTCGATTCGAACCCCAGTCCATCGTCCTCGA
TGGATCTCGGTAGCTTGAACCCATCTCTGTCTTCGAATATAACGTCGGAGTTCTCGTCTCTTCTTGAGTCCACTTCGCAGAATTCGATGAATGTGGGCATGGCGTCTAGTGCCGCAATGCCTTCTCAGCCACAGGCTGTTCAGCACAACGATATGCTGATGCCTGCCGACGAGTGGTCTGGGAACACCACGCCGAGTGCT
CAAAGTTCTCGGCAGGGATTTCAGAGTTCTTCCCCTAGTCAGTGCCAGAGTTCTGTTAGCCAAGGACAGGTCTCAAAGGCGGGGAACGTGGAGAATAACCGAATGCAACAATATGGTTATGATAAGCACCTGTGGGGCGGTTCCCAAAATGCTCATGAAATGTTTGGGATGCCGCAACAGATTAATCGAGACGGGATGTC
GCAAGCAGGTGATAATCAGTCGGCAATACGTGGACACCAACAAGGCTTCCAAGCAGAAATGAGGAAGCCAAACTTTTCTAGCAAGCAATCTGGCCAGGTACTGTCAGGTGTTTCTCAGCAATCTGGTTTTCAAAATCATGCTCAAGCTACTAACGGACAGGCCAGTTATTTACAACAACAAAGACTTTGTCATGGGAGTA
ATGCCTCAGATATATCTTCACAGGAATCAGCTTCCCAGGAAGTGAAAGGTGCTGTTCAACCAATGGACTTTGAACAGAATCAGGCAAGCCAGGTACCAAGTTTCGATGGGGCTACAAAAGTGAACATGCATGCGAGTAACCACTGTTTGCCGCAGCCTCCAGTTTATCAGAGGATGGAAATTGACAACCAGCCGCCAAGG
TTTCCAGGTATGCAGCCCACCAATCAACAAGCAATGTTCCAAAGAGGTCCTGCCCTTAGTCAGCCTCAGAAAGCTATGGACGGGCATAGGATGCAGCAATGTGAACTCCAAGGCGATCCTGTCATGCAGACCATGCGGAGTCTAGGATTTCAAATGCAAGGAATCAACCCTCAGAACACAATGCAAGGCCAGCTTCAAGA
GCAATACTTAAATGCAAATGGCCATCCATTATCGGTTATTCTTCAAAATCAGGCTCCTGCTCAAGGTCAATCCCAGATGCCAACAGTGCCCCAACGTCATGCCCAAAGCCAAGTGGCAAATCAGCAAGCTGCAGTCAATCAACAGGCAGTTTATCAAACTAGACATTTGCAGTCTGGGTCACATCAATCTCCATTTCAAA
CGAACCAGCAGGCTTCTTTTCATTTGGGTCAGCCTCAGGTAAACCAAGTGCACCAGCATGGTGGTAACCCTGGATCACATTTGGCAGGGATCCAACATCTTAGCCAACTTCAAGCAAGAGCACAGAACTCATTATTCCAGGGCGTAAAGATTGGGGGGCGGCACTTATTGCATGGATCACCCAGTGCCCCTGTAAGCTAT
GTTGGCAACGGCATTGATGCAGGAGTGCGAAGTCCAATGCCAGTAGCCGTTGTCTCGAGGTGTCTTGAGATTCTTATGCTTTATATTCAAGAACAGAGAAATCGACCACAGgtagggttctcaagcacagcacctttcttgatgcagaattaacttttgtaaagagtgtaaagctccctcagaaataaatggtattctat
aatttttaatgcatcccttattatattgtcataaaagttttcagttgatgaacaacatatttatctcaatggtctccttgtttaaaactaccaaacatatcatgtatgaaaaagacaagtggagaacttcatctttgctccatttctggtatagtttaaaaaatgaagctagtaatgtgtgagaatatgctaaaattggc
atataaaaagcagatgcatttttttctgatggaaacagGATAATGGCATAGGATTTTGGAGGAAGCTTGTTCATGATTATTTTGCTCCTGGAGCAACAGAACGCTGGTGCTTATCAAGCTACAGCTCTTCTCAAATGAGCAGGAATGCGCAAGGCTTGTTTCCAATGGATTATTGGTTCTGCAACATATGTGGAATGCAA
CCTGGGCGAGGATTTGAATATAGTACAGACGTCCTGCCAAGACTTTTCAAGATCAAGTACGACAGTGGGTTGTTGGAGGAGCTTTTATGCCTTGATATAGCTGAAGAGAGCTACATGGTTCCACCAGGAAAATGTGTATTAGAGTTTCCACGTGCAGTTCACGAGTCTGTATTTCCTGAGCTACGGGTGGTTCGGTATGG
AAAGTTGAGAGTCACATTCAATAGTTCTCTGAAGATATTATCCTGGGAATTCTGTGCTAGGGTGCATGATGAAGTTGTACCACGGAAGAATCTTATTCAGCAGGCGCAGCAGTTAACAAACTTAGTGGAGGCTGAACATGAGGGTTCCGACAAGGATGCATCAAATTTGAAGGCTCAATGTAACGCGTTCACGTTTTGTG
CAAAGCAGCTGAAGTCAAAGTTGGAATCCCCCAATGTAAATGATCTTGGCTTTTCAAAACGCTATGTCAGATGCTTACAGATAGCTGAGGTAGTTAACAGCATGAAAGACTTAATCTCTTTTGAGAAGAAGACTCATCTTGGACCAACTGAAAGCTTGAACCAATTTCCAACAATAAGGAAGCTGCACTCAGAAGGGATG
CTTCAACAGTCATCTGTTACTCAAGTCGTGAGTCAGCTTACACAAGGTTCAGGGAATTCAAATTCCCCATATCCAAAAATGGCATCAAGGTTGTCTTTGCCAATGAGGCAAGGAATCAGTTTTAGTCAAACACCATCCTCTGTTCTTCAGGGCAATGATCCATTGTTGACAAAGCCACCTTCAGCCATGAATCCATTACA
TGTAACGCTAAGAAATCAGTTTGACGCACGGAATCAAAGTTTGATGCAAACACAAGCAGGCAATCAAATGCAACCTCCATCTGTTTCACATGTAGATTCGGTTAGTCAGGGGCAGTCACACAGTAATAACCAATTTCTTTCTCAATTCACACAACAGGCACCCTCATCTTTGCAAGGACAGCCTCTAGGCCAGGTACAGT
CAGCTGCCTCTGGTCAAATTTCCTCTCAGATTTTGGGTTGTCAGTCTCAGAATATTAACCACTTGGGCCAGCAAATGTTTGATCAAGGTATTGCAAAGCAGATTAATTTTCAGCCTTCAAATCAAGTAATAACTCAGTCAAGATCCTTGAATCGAACAGGGCAGCAAAGCTTGCCGGGCACTCCACAAAGTGAGATGAGT
GATATGAGGTCAAACACATAATGGACAATAGCTAATATTTCCCCACTTATTTGTGGATGTGTGTATTATATTTCATTGTCAGGACTTTCTTGTATGGTTGAAGTTGCAAGGTTTTGGCAATCAGGTAATTGCATTTGCTTGTTTCATGATTTCACCTGATTCTTTTTAACGTAGCTATTTTTAGATATAACACCAAAAAG
GGTTTATGATCCTGGAATGTCTATTTGGTCCCCATTAAAGAGGATCTTATGAAGAGATTGTTCTAGCGATTGCTCTACAAACCAAATCATGGTTTGTGTGTGTGTCTATATATATATAATCTATATAGTATATATAGACACGTATATATAGTGTTTTGCGAAAAGCAAGGAATTGTACCCTACTCAGGGTAATTGTTTAG
TATCTGATAAAACTTTTTATTGTATATTAGAGCTTTTTGA
Intron 2 GTGAGTAATG ... CGGATCTTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 51.14 | 43 | 3.3 | 45 |
| A2 | 53.15 | 52 | 10.7 | 59 |
| A3 | 53.28 | 57 | 6 | 65 |
| A4 | 48.62 | 56 | 4 | 53 |
| A5 | 48.57 | 54 | 16 | 51 |
| A6 | 50 | 6 | 0 | 6 |
| A7 | 45.41 | 33.7 | 0 | 28 |
| A8 | 44.44 | 15 | 0 | 12 |
| A9 | 39.53 | 26 | 0 | 17 |
| A10 | 42.11 | 33 | 0 | 24 |
>TRINITY_DN113769_c2_g1_i13 from sample A3 / Example spliced isoformTGGAGGGAGGGGGTGGCCGAGGAGGAGGAGGAGGAGGAGGGCCAGGCGACGGGCGACGGATTTAAAAGCAAATCAAAAGGTTTCAGAGTCTCAGCTACTGTTTCTGGGCCTGCAAGTTTCGCGGGGTTTTGAACTCCTAACTTTCGGGCTTCGTCTCTGTGCCGATGCGCATTTGTTTTCCTTCTGATCAAAGATGCGAA
CAGTAGTGAAAATTATGGATTTCAATAAATTATTTGCATGAAGGGTTAGCCTCGGTTTTTTTTTTATTAATTAAGGGCACAGGGGTTTCGGTTGTGAATCGAGGACAGTGGCGGAGATATCAGTTGGCTGGGGTTTGGTGAAGGGAGACTGCTGCCGTCTGATGAGGCAGAAGATGATATTTTAGAGCACTTGATTTATT
GGATTTTTTATTTTATTTTATTTGGGAGGTATTTTAGAGATGGAGAGGTTCAACAGCGCCACATTATTGGATATTCGGCAGCTGAATCGGACCAACGCTGCCTTGCAATTCAGTCCCCAGATGGCTATGAGCAATGATAGTTTCTTGATGCTCGATTCGAACCCCAGTCCATCGTCCTCGATGGATCTCGGTAGCTTGAA
CCCATCTCTGTCTTCGAATATAACGTCGGAGTTCTCGTCTCTTCTTGAGTCCACTTCGCAGAATTCGATGAATGTGGGCATGGCGTCTAGTGCCGCAATGCCTTCTCAGCCACAGGCTGTTCAGCACAACGATATGCTGATGCCTGCCGACGAGTGGTCTGGGAACACCACGCCGAGTGCTCAAAGTTCTCGGCAGGGAT
TTCAGAGTTCTTCCCCTAGTCAGTGCCAGAGTTCTGTTAGCCAAGGACAGGTCTCAAAGGCGGGGAACGTGGAGAATAACCGAATGCAACAATATGGTTATGATAAGCACCTGTGGGGCGGTTCCCAAAATGCTCATGAAATGTTTGGGATGCCGCAACAGATTAATCGAGACGGGATGTCGCAAGCAGGTGATAATCAG
TCGGCAATACGTGGACACCAACAAGGCTTCCAAGCAGAAATGAGGAAGCCAAACTTTTCTAGCAAGCAATCTGGCCAGGTACTGTCAGGTGTTTCTCAGCAATCTGGTTTTCAAAATCATGCTCAAGCTACTAACGGACAGGCCAGTTATTTACAACAACAAAGACTTTGTCATGGGAGTAATGCCTCAGATATATCTTC
ACAGGAATCAGCTTCCCAGGAAGTGAAAGGTGCTGTTCAACCAATGGACTTTGAACAGAATCAGGCAAGCCAGGTACCAAGTTTCGATGGGGCTACAAAAGTGAACATGCATGCGAGTAACCACTGTTTGCCGCAGCCTCCAGTTTATCAGAGGATGGAAATTGACAACCAGCCGCCAAGGTTTCCAGGTATGCAGCCCA
CCAATCAACAAGCAATGTTCCAAAGAGGTCCTGCCCTTAGTCAGCCTCAGAAAGCTATGGACGGGCATAGGATGCAGCAATGTGAACTCCAAGGCGATCCTGTCATGCAGACCATGCGGAGTCTAGGATTTCAAATGCAAGGAATCAACCCTCAGAACACAATGCAAGGCCAGCTTCAAGAGCAATACTTAAATGCAAAT
GGCCATCCATTATCGGTTATTCTTCAAAATCAGGCTCCTGCTCAAGGTCAATCCCAGATGCCAACAGTGCCCCAACGTCATGCCCAAAGCCAAGTGGCAAATCAGCAAGCTGCAGTCAATCAACAGGCAGTTTATCAAACTAGACATTTGCAGTCTGGGTCACATCAATCTCCATTTCAAACGAACCAGCAGGCTTCTTT
TCATTTGGGTCAGCCTCAGGTAAACCAAGTGCACCAGCATGGTGGTAACCCTGGATCACATTTGGCAGGGATCCAACATCTTAGCCAACTTCAAGCAAGAGCACAGAACTCATTATTCCAGGGCGTAAAGATTGGGGGGCGGCACTTATTGCATGGATCACCCAGTGCCCCTGTAAGCTATGTTGGCAACGGCATTGATG
CAGGAGTGCGAAGTCCAATGCCAGTAGCCGTTGTCTCGAGGTGTCTTGAGATTCTTATGCTTTATATTCAAGAACAGAGAAATCGACCACAGGATAATGGCATAGGATTTTGGAGGAAGCTTGTTCATGATTATTTTGCTCCTGGAGCAACAGAACGCTGGTGCTTATCAAGCTACAGCTCTTCTCAAATGAGCAGGAAT
GCGCAAGGCTTGTTTCCAATGG
>TRINITY_DN113769_c2_g1_i3 from sample A3 / Example unspliced isoform:GTCGGATTTAAAAGCAAATCAAgtgagtaatggcttctgtatccttataaatgtagggcaattggctccgtaatcagggcagatttgatatttgctcaaagtctttatttattttgttttggtttcgtttcaagggcggatcttagAAGGTTTCAGAGTCTCAGCTACTGTTTCTGGGCCTGCAAGTTTCGCGGGGTTTT
GAACTCCTAACTTTCGGGCTTCGTCTCTGTGCCGATGCGCATTTGTTTTCCTTCTGATCAAAGATGCGAACAGTAGTGAAAATTATGGATTTCAATAAATTATTTGCATGAAGGGTTAGCCTCGGTTTTTTTTTTATTAATTAAGGGCACAGGGGTTTCGGTTGTGAATCGAGGACAGTGGCGGAGATATCAGTTGGCTG
GGGTTTGGTGAAGGGAGACTGCTGCCGTCTGATGAGGCAGAAGATGATATTTTAGAGCACTTGATTTATTGGATTTTTTATTTTATTTTATTTGGGAGGTATTTTAGAGATGGAGAGGTTCAACAGCGCCACATTATTGGATATTCGGCAGCTGAATCGGACCAACGCTGCCTTGCAATTCAGTCCCCAGATGGCTATGA
GCAATGATAGTTTCTTGATGCTCGATTCGAACCCCAGTCCATCGTCCTCGATGGATCTCGGTAGCTTGAACCCATCTCTGTCTTCGAATATAACGTCGGAGTTCTCGTCTCTTCTTGAGTCCACTTCGCAGAATTCGATGAATGTGGGCATGGCGTCTAGTGCCGCAATGCCTTCTCAGCCACAGGCTGTTCAGCACAAC
GATATGCTGATGCCTGCCGACGAGTGGTCTGGGAACACCACGCCGAGTGCTCAAAGTTCTCGGCAGGGATTTCAGAGTTCTTCCCCTAGTCAGTGCCAGAGTTCTGTTAGCCAAGGACAGGTCTCAAAGGCGGGGAACGTGGAGAATAACCGAATGCAACAATATGGTTATGATAAGCACCTGTGGGGCGGTTCCCAAAA
TGCTCATGAAATGTTTGGGATGCCGCAACAGATTAATCGAGACGGGATGTCGCAAGCAGGTGATAATCAGTCGGCAATACGTGGACACCAACAAGGCTTCCAAGCAGAAATGAGGAAGCCAAACTTTTCTAGCAAGCAATCTGGCCAGGTACTGTCAGGTGTTTCTCAGCAATCTGGTTTTCAAAATCATGCTCAAGCTA
CTAACGGACAGGCCAGTTATTTACAACAACAAAGACTTTGTCATGGGAGTAATGCCTCAGATATATCTTCACAGGAATCAGCTTCCCAGGAAGTGAAAGGTGCTGTTCAACCAATGGACTTTGAACAGAATCAGGCAAGCCAGGTACCAAGTTTCGATGGGGCTACAAAAGTGAACATGCATGCGAGTAACCACTGTTTG
CCGCAGCCTCCAGTTTATCAGAGGATGGAAATTGACAACCAGCCGCCAAGGTTTCCAGGTATGCAGCCCACCAATCAACAAGCAATGTTCCAAAGAGGTCCTGCCCTTAGTCAGCCTCAGAAAGCTATGGACGGGCATAGGATGCAGCAATGTGAACTCCAAGGCGATCCTGTCATGCAGACCATGCGGAGTCTAGGATT
TCAAATGCAAGGAATCAACCCTCAGAACACAATGCAAGGCCAGCTTCAAGAGCAATACTTAAATGCAAATGGCCATCCATTATCGGTTATTCTTCAAAATCAGGCTCCTGCTCAAGGTCAATCCCAGATGCCAACAGTGCCCCAACGTCATGCCCAAAGCCAAGTGGCAAATCAGCAAGCTGCAGTCAATCAACAGGCAG
TTTATCAAACTAGACATTTGCAGTCTGGGTCACATCAATCTCCATTTCAAACGAACCAGCAGGCTTCTTTTCATTTGGGTCAGCCTCAGGTAAACCAAGTGCACCAGCATGGTGGTAACCCTGGATCACATTTGGCAGGGATCCAACATCTTAGCCAACTTCAAGCAAGAGCACAGAACTCATTATTCCAGGGCGTAAAG
ATTGGGGGGCGGCACTTATTGCATGGATCACCCAGTGCCCCTGTAAGCTATGTTGGCAACGGCATTGATGCAGGAGTGCGAAGTCCAATGCCAGTAGCCGTTGTCTCGAGGTGTCTTGAGATTCTTATGCTTTATATTCAAGAACAGAGAAATCGACCACAGGATAATGGCATAGGATTTTGGAGGAAGCTTGTTCATGA
TTATTTTGCTCCTGGAGCAACAGAACGCTGGTGCTTATCAAGCTACAGCTCTTCTCAAATGAGCAGGAATGCGCAAGGCTTGTTTCCAATGGATTATTGGTTCTGCAACATATGTGGAATGCAACCTGGGCGAGGATTTGAATATAGTACAGACGTCCTGCCAAGACTTTTCAAGATCAAGTACGACAGTGGGTTGTTGG
AGGAGCTTTTATGCCTTGATATAGCTGAAGAGAGCTACATGGTTCCACCAGGAAAATGTGTATTAGAGTTTCCACGTGCAGTTCACGAGTCTGTATTTCCTGAGCTACGGGTGGTTCGGTATGGAAAGTTGAGAGTCACATTCAATAGTTCTCTGAAGATATTATCCTGGGAATTCTGTGCTAGGGTGCATGATGAAGTT
GTACCACGGAAGAATCTTATTCAGCAGGCGCAGCAGTTAACAAACTTAGTGGAGGCTGAACATGAGGGTTCCGACAAGGATGCATCAAATTTGAAGGCTCAATGTAACGCGTTCACGTTTTGTGCAAAGCAGCTGAAGTCAAAGTTGGAATCCCCCAATGTAAATGATCTTGGCTTTTCAAAACGCTATGTCAGATGCTT
ACAGATAGCTGAGGTAGTTAACAGCATGAAAGACTTAATCTCTTTTGAGAAGAAGACTCATCTTGGACCAACTGAAAGCTTGAACCAATTTCCAACAATAAGGAAGCTGCACTCAGAAGGGATGCTTCAACAGTCATCTGTTACTCAAGTCGTGAGTCAGCTTACACAAGGTTCAGGGAATTCAAATTCCCCATATCCAA
AAATGGCATCAAGGTTGTCTTTGCCAATGAGGCAAGGAATCAGTTTTAGTCAAACACCATCCTCTGTTCTTCAGGGCAATGATCCATTGTTGACAAAGCCACCTTCAGCCATGAATCCATTACATGTAACGCTAAGAAATCAGTTTGACGCACGGAATCAAAGTTTGATGCAAACACAAGCAGGCAATCAAATGCAACCT
CCATCTGTTTCACATGTAGATTCGGTTAGTCAGGGGCAGTCACACAGTAATAACCAATTTCTTTCTCAATTCACACAACAGGCACCCTCATCTTTGCAAGGACAGCCTCTAGGCCAGGTACAGTCAGCTGCCTCTGGTCAAATTTCCTCTCAGATTTTGGGTTGTCAGTCTCAGAATATTAACCACTTGGGCCAGCAAAT
GTTTGATCAAGGTATTGCAAAGCAGATTAATTTTCAGCCTTCAAATCAAGTAATAACTCAGTCAAGATCCTTGAATCGAACAGGGCAGCAAAGCTTGCCGGGCACTCCACAAAGTGAGATGAGTGATATGAGGTCAAACACATAATGGACAATAGCTAATATTTCCCCACTTATTTGTGGATGTGTGTATTATATTTCAT
TGTCAGGACTTTCTTGTATGGTTGAAGTTGCAAGGTTTTGGCAATCAGGTAATTGCATTTGCTTGTTTCATGATTTCACCTGATTCTTTTTAACGTAGCTATTTTTAGATATAACACCAAAAAGGGTTTATGATCCTGGAATGTCTATTTGGTCCCCATTAAAGAGGATCTTATGAAGAGATTGTTCTAGCGATTGCTCT
ACAAACCAAATCATGGTTTGTGTGTGTGTCTATATATATATAATCTATATAGTATATATAGACACGTATATATAGTGTTTTGCGAAAAGCAAGGAATTGTACCCTACTCAGGGTAATTGTTTAGTATCTGATAAAACTTTTTATTGTATATTAGAGCTTTTTGATATAGCATTGCCAA
Intron 3 GTAAATGATC ... ATGCTTACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 70.13 | 19 | 46 | 42 |
| A2 | 75.72 | 9.5 | 27.8 | 30.4 |
| A3 | 83.92 | 4.5 | 23.8 | 22.3 |
| A4 | 80.39 | 8.1 | 34 | 31.7 |
| A5 | 100 | 0 | 13 | 8.6 |
| A6 | 71.86 | 20.5 | 47 | 57.7 |
| A7 | 82.62 | 21.4 | 96 | 107.2 |
| A8 | 75.58 | 31.9 | 102 | 89.8 |
| A9 | 82.02 | 19.2 | 82.8 | 91.6 |
| A10 | 75.99 | 19.6 | 64 | 58.7 |
>TRINITY_DN124929_c0_g1_i8 from sample A1 / Example spliced isoformGTTTGCTGGAGGGAGGGGGTGGCCGAGGAGGAGGAGGAGGAGGAGGGCCAGGCGACGGGCGACGGATTTAAAAGCAAATCAAGGCGGATCTTAGAAGGTTTCAGAGTCTCAGCTACTGTTTCTGGGCCTGCAAGTTTCGCGGGGTTTTGAACTCCTAACTTTCGGGCTTCGTCTCTGTGCCGATGCGCATTTGTTTTCCT
TCTGATCAAAGATGCGAACAGTAGTGAAAATTATGGATTTCAATAAATTATTTGCATGAAGGGTTAGCCTCGGTTTTTTTTTTTATTAATTAAGGGCACAGGGGTTTCGGTTGTGAATCGAGGACAGTGGCGGAGATATCAGTTGGCTGGGGTTTGGTGAAGGGAGACTGCTGCCGTCTGATGAGGCAGAAGATGATATT
TTAGAGCACTTGATTTATTGGATTTTTTATTTTATTTTATTTGGGAGGTATTTTAGAGATGGAGAGGTTCAACAGCGCCACATTATTGGATATTCGGCAGCTGAATCGGACCAACGCTGCCTTGCAATTCAGTCCCCAGATGGCTATGAGCAATGATAGTTTCTTGATGCTCGATTCGAACCCCAGTCCATCGTCCTCGA
TGGATCTCGGTAGCTTGAACCCATCTCTGTCTTCGAATATAACGTCGGAGTTCTCGTCTCTTCTTGAGTCCACTTCGCAGAATTCGATGAATGTGGGCATGGCGTCTAGTGCCGCAATGCCTTCTCAGCCACAGGCTGTTCAGCACAACGATATGCTGATGCCTGCCGACGAGTGGTCTGGGAACACCACGCCGAGTGCT
CAAAGTTCTCGGCAGGGATTTCAGAGTTCTTCCCCTAGTCAGTGCCAGAGTTCTGTTAGCCAAGGACAGGTCTCAAAGGCGGGGAACGTGGAGAATAACCGAATGCAACAATATGGTTATGATAAGCACCTGTGGGGCGGTTCCCAAAATGCTCATGAAATGTTTGGGATGCCGCAACAGATTAATCGAGACGGGATGTC
GCAAGCAGGTGATAATCAGTCGGCAATACGTGGACACCAACAAGGCTTCCAAGCAGAAATGAGGAAGCCAAACTTTTCTAGCAAGCAATCTGGCCAGGTACTGTCAGGTGTTTCTCAGCAATCTGGTTTTCAAAATCATGCTCAAGCTACTAACGGACAGGCCAGTTATTTACAACAACAAAGACTTTGTCATGGGAGTA
ATGCCTCAGATATATCTTCACAGGAATCAGCTTCCCAGGAAGTGAAAGGTGCTGTTCAACCAATGGACTTTGAACAGAATCAGGCAAGCCAGGTACCAAGTTTCGATGGGGCTACAAAAGTGAACATGCATGCGAGTAACCACTGTTTGCCGCAGCCTCCAGTTTATCAGAGGATGGAAATTGACAACCAGCCGCCAAGG
TTTCCAGGTATGCAGCCCACCAATCAACAAGCAATGTTCCAAAGAGGTCCTGCCCTTAGTCAGCCTCAGAAAGCTATGGACGGGCATAGGATGCAGCAATGTGAACTCCAAGGCGATCCTGTCATGCAGACCATGCGGAGTCTAGGATTTCAAATGCAAGGAATCAACCCTCAGAACACAATGCAAGGCCAGCTTCAAGA
GCAATACTTAAATGCAAATGGCCATCCATTATCGGTTATTCTTCAAAATCAGGCTCCTGCTCAAGGTCAATCCCAGATGCCAACAGTGCCCCAACGTCATGCCCAAAGCCAAGTGGCAAATCAGCAAGCTGCAGTCAATCAACAGGCAGTTTATCAAACTAGACATTTGCAGTCTGGGTCACATCAATCTCCATTTCAAA
CGAACCAGCAGGCTTCTTTTCATTTGGGTCAGCCTCAGGTAAACCAAGTGCACCAGCATGGTGGTAACCCTGGATCACATTTGGCAGGGATCCAACATCTTAGCCAACTTCAAGCAAGAGCACAGAACTCATTATTCCAGGGCGTAAAGATTGGGGGGCGGCACTTATTGCATGGATCACCCAGTGCCCCTGTAAGCTAT
GTTGGCAACGGCATTGATGCAGGAGTGCGAAGTCCAATGCCAGTAGCCGTTGTCTCGAGGTGTCTTGAGATTCTTATGCTTTATATTCAAGAACAGAGAAATCGACCACAGGATAATGGCATAGGATTTTGGAGGAAGCTTGTTCATGATTATTTTGCTCCTGGAGCAACAGAACGCTGGTGCTTATCAAGCTACAGCTC
TTCTCAAATGAGCAGGAATGCGCAAGGCTTGTTTCCAATGGATTATTGGTTCTGCAACATATGTGGAATGCAACCTGGGCGAGGATTTGAATATAGTACAGACGTCCTGCCAAGACTTTTCAAGATCAAGTACGACAGTGGGTTGTTGGAGGAGCTTTTATGCCTTGATATAGCTGAAGAGAGCTACATGGTTCCACCAG
GAAAATGTGTATTAGAGTTTCCACGTGCAGTTCACGAGTCTGTATTTCCTGAGCTACGGGTGGTTCGGTATGGAAAGTTGAGAGTCACATTCAATAGTTCTCTGAAGATATTATCCTGGGAATTCTGTGCTAGGGTGCATGATGAAGTTGTACCACGGAAGAATCTTATTCAGCAGGCGCAGCAGTTAACAAACTTAGTG
GAGGCTGAACATGAGGGTTCCGACAAGGATGCATCAAATTTGAAGGCTCAATGTAACGCGTTCACGTTTTGTGCAAAGCAGCTGAAGTCAAAGTTGGAATCCCCCAATATAGCTGAGGTAGTTAACAGCATGAAAGACTTAATCTCTTTTGAGAAGAAGACTCATCTTGGACCAACTGAAAGCTTGAACCAATTTCCAAC
AATAAGGAAGCTGCACTCAGAAGGGATGCTTCAACAGTCATCTGTTACTCAAGTCGTGAGTCAGCTTACACAAGGTTCAGGGAATTCAAATTCCCCATATCCAAAAATGGCATCAAGGTTGTCTTTGCCAATGAGGCAAGGAATCAGTTTTAGTCAAACACCATCCTCTGTTCTTCAGGGCAATGATCCATTGTTGACAA
AGCCACCTTCAGCCATGAATCCATTACATGTAACGCTAAGAAATCAGTTTGACGCACGGAATCAAAGTTTGATGCAAACACAAGCAGGCAATCAAATGCAACCTCCATCTGTTTCACATGTAGATTCGGTTAGTCAGGGGCAGTCACACAGTAATAACCAATTTCTTTCTCAATTCACACAACAGGCACCCTCATCTTTG
CAAGGACAGCCTCTAGGCCAGGTACAGTCAGCTGCCTCTGGTCAAATTTCCTCTCAGATTTTGGGTTGTCAGTCTCAGAATATTAACCACTTGGGCCAGCAAATGTTTGATCAAGGTATTGCAAAGCAGATTAATTTTCAGCCTTCAAATCAAGTAATAACTCAGTCAAGATCCTTGAATCGAACAGGGCAGCAAAGCTT
GCCGGGCACTCCACAAAGTGAGATGAGTGATATGAGGTCAAACACATAATGGACAATAGCTAATATTTCCCCACTTATTTGTGGATGTGTGTATTATATTTCATTGTCAGGACTTTCTTGTATGGTTGAAGTTGCAAGGTTTTGGCAATCAGGTAATTGCATTTGCTTGTTTCATGATTTCACCTGATTCTTTTTAACGT
AGCTATTTTTAGATATAACACCAAAAAGGGTTTATGATCCTGGAATGTCTATTTGGTCCCCATTAAAGAGGATCTTATGAAGAGATTGTTCTAGCGATTGCTCTACAAACCAAATCATGGTTTGTGTGTGTGTCTATATATATATAATCTATATAGTATATATAGACACGTATATATAGTGTTTTGCGAAAAGCAAGGAA
TTGTACCCTACTCAGGGTAATTGTTTAGTATCTGATAAAACTTTTTATTGTATATTAGAGCTTTTTGA
>TRINITY_DN124929_c0_g1_i6 from sample A1 / Example unspliced isoform:GTTTGCTGGAGGGAGGGGGTGGCCGAGGAGGAGGAGGAGGAGGAGGGCCAGGCGACGGGCGACGGATTTAAAAGCAAATCAAGTGAGTAATGGCTTCTGTATCCTTATAAATGTAGGGCAATTGGCTCCGTAATCAGGGCAGATTTGATATTTGCTCAAAGTCTTTATTTATTTTGTTTTGGTTTCGTTTCAAGGGCGGA
TCTTAGAAGGTTTCAGAGTCTCAGCTACTGTTTCTGGGCCTGCAAGTTTCGCGGGGTTTTGAACTCCTAACTTTCGGGCTTCGTCTCTGTGCCGATGCGCATTTGTTTTCCTTCTGATCAAAGATGCGAACAGTAGTGAAAATTATGGATTTCAATAAATTATTTGCATGAAGGGTTAGCCTCGGTTTTTTTTTTTATTA
ATTAAGGGCACAGGGGTTTCGGTTGTGAATCGAGGACAGTGGCGGAGATATCAGTTGGCTGGGGTTTGGTGAAGGGAGACTGCTGCCGTCTGATGAGGCAGAAGATGATATTTTAGAGCACTTGATTTATTGGATTTTTTATTTTATTTTATTTGGGAGGTATTTTAGAGATGGAGAGGTTCAACAGCGCCACATTATTG
GATATTCGGCAGCTGAATCGGACCAACGCTGCCTTGCAATTCAGTCCCCAGATGGCTATGAGCAATGATAGTTTCTTGATGCTCGATTCGAACCCCAGTCCATCGTCCTCGATGGATCTCGGTAGCTTGAACCCATCTCTGTCTTCGAATATAACGTCGGAGTTCTCGTCTCTTCTTGAGTCCACTTCGCAGAATTCGAT
GAATGTGGGCATGGCGTCTAGTGCCGCAATGCCTTCTCAGCCACAGGCTGTTCAGCACAACGATATGCTGATGCCTGCCGACGAGTGGTCTGGGAACACCACGCCGAGTGCTCAAAGTTCTCGGCAGGGATTTCAGAGTTCTTCCCCTAGTCAGTGCCAGAGTTCTGTTAGCCAAGGACAGGTCTCAAAGGCGGGGAACG
TGGAGAATAACCGAATGCAACAATATGGTTATGATAAGCACCTGTGGGGCGGTTCCCAAAATGCTCATGAAATGTTTGGGATGCCGCAACAGATTAATCGAGACGGGATGTCGCAAGCAGGTGATAATCAGTCGGCAATACGTGGACACCAACAAGGCTTCCAAGCAGAAATGAGGAAGCCAAACTTTTCTAGCAAGCAA
TCTGGCCAGGTACTGTCAGGTGTTTCTCAGCAATCTGGTTTTCAAAATCATGCTCAAGCTACTAACGGACAGGCCAGTTATTTACAACAACAAAGACTTTGTCATGGGAGTAATGCCTCAGATATATCTTCACAGGAATCAGCTTCCCAGGAAGTGAAAGGTGCTGTTCAACCAATGGACTTTGAACAGAATCAGGCAAG
CCAGGTACCAAGTTTCGATGGGGCTACAAAAGTGAACATGCATGCGAGTAACCACTGTTTGCCGCAGCCTCCAGTTTATCAGAGGATGGAAATTGACAACCAGCCGCCAAGGTTTCCAGGTATGCAGCCCACCAATCAACAAGCAATGTTCCAAAGAGGTCCTGCCCTTAGTCAGCCTCAGAAAGCTATGGACGGGCATA
GGATGCAGCAATGTGAACTCCAAGGCGATCCTGTCATGCAGACCATGCGGAGTCTAGGATTTCAAATGCAAGGAATCAACCCTCAGAACACAATGCAAGGCCAGCTTCAAGAGCAATACTTAAATGCAAATGGCCATCCATTATCGGTTATTCTTCAAAATCAGGCTCCTGCTCAAGGTCAATCCCAGATGCCAACAGTG
CCCCAACGTCATGCCCAAAGCCAAGTGGCAAATCAGCAAGCTGCAGTCAATCAACAGGCAGTTTATCAAACTAGACATTTGCAGTCTGGGTCACATCAATCTCCATTTCAAACGAACCAGCAGGCTTCTTTTCATTTGGGTCAGCCTCAGGTAAACCAAGTGCACCAGCATGGTGGTAACCCTGGATCACATTTGGCAGG
GATCCAACATCTTAGCCAACTTCAAGCAAGAGCACAGAACTCATTATTCCAGGGCGTAAAGATTGGGGGGCGGCACTTATTGCATGGATCACCCAGTGCCCCTGTAAGCTATGTTGGCAACGGCATTGATGCAGGAGTGCGAAGTCCAATGCCAGTAGCCGTTGTCTCGAGGTGTCTTGAGATTCTTATGCTTTATATTC
AAGAACAGAGAAATCGACCACAGGATAATGGCATAGGATTTTGGAGGAAGCTTGTTCATGATTATTTTGCTCCTGGAGCAACAGAACGCTGGTGCTTATCAAGCTACAGCTCTTCTCAAATGAGCAGGAATGCGCAAGGCTTGTTTCCAATGGATTATTGGTTCTGCAACATATGTGGAATGCAACCTGGGCGAGGATTT
GAATATAGTACAGACGTCCTGCCAAGACTTTTCAAGATCAAGTACGACAGTGGGTTGTTGGAGGAGCTTTTATGCCTTGATATAGCTGAAGAGAGCTACATGGTTCCACCAGGAAAATGTGTATTAGAGTTTCCACGTGCAGTTCACGAGTCTGTATTTCCTGAGCTACGGGTGGTTCGGTATGGAAAGTTGAGAGTCAC
ATTCAATAGTTCTCTGAAGATATTATCCTGGGAATTCTGTGCTAGGGTGCATGATGAAGTTGTACCACGGAAGAATCTTATTCAGCAGGCGCAGCAGTTAACAAACTTAGTGGAGGCTGAACATGAGGGTTCCGACAAGGATGCATCAAATTTGAAGGCTCAATGTAACGCGTTCACGTTTTGTGCAAAGCAGCTGAAGT
CAAAGTTGGAATCCCCCAATgtaaatgatcttggcttttcaaaacgctatgtcagatgcttacagATAGCTGAGGTAGTTAACAGCATGAAAGACTTAATCTCTTTTGAGAAGAAGACTCATCTTGGACCAACTGAAAGCTTGAACCAATTTCCAACAATAAGGAAGCTGCACTCAGAAGGGATGCTTCAACAGTCATCT
GTTACTCAAGTCGTGAGTCAGCTTACACAAGGTTCAGGGAATTCAAATTCCCCATATCCAAAAATGGCATCAAGGTTGTCTTTGCCAATGAGGCAAGGAATCAGTTTTAGTCAAACACCATCCTCTGTTCTTCAGGGCAATGATCCATTGTTGACAAAGCCACCTTCAGCCATGAATCCATTACATGTAACGCTAAGAAA
TCAGTTTGACGCACGGAATCAAAGTTTGATGCAAACACAAGCAGGCAATCAAATGCAACCTCCATCTGTTTCACATGTAGATTCGGTTAGTCAGGGGCAGTCACACAGTAATAACCAATTTCTTTCTCAATTCACACAACAGGCACCCTCATCTTTGCAAGGACAGCCTCTAGGCCAGGTACAGTCAGCTGCCTCTGGTC
AAATTTCCTCTCAGATTTTGGGTTGTCAGTCTCAGAATATTAACCACTTGGGCCAGCAAATGTTTGATCAAGGTATTGCAAAGCAGATTAATTTTCAGCCTTCAAATCAAGTAATAACTCAGTCAAGATCCTTGAATCGAACAGGGCAGCAAAGCTTGCCGGGCACTCCACAAAGTGAGATGAGTGATATGAGGTCAAAC
ACATAATGGACAATAGCTAATATTTCCCCACTTATTTGTGGATGTGTGTATTATATTTCATTGTCAGGACTTTCTTGTATGGTTGAAGTTGCAAGGTTTTGGCAATCAGGTAATTGCATTTGCTTGTTTCATGATTTCACCTGATTCTTTTTAACGTAGCTATTTTTAGATATAACACCAAAAAGGGTTTATGATCCTGG
AATGTCTATTTGGTCCCCATTAAAGAGGATCTTATGAAGAGATTGTTCTAGCGATTGCTCTACAAACCAAATCATGGTTTGTGTGTGTGTCTATATATATATAATCTATATAGTATATATAGACACGTATATATAGTGTTTTGCGAAAAGCAAGGAATTGTACCCTACTCAGGGTAATTGTTTAGTATCTGATAAAACTT
TTTATTGTATATTAGAGCTTTTTGA
Intron 4 GTGAGTAATG ... TCGTTTCAAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 52.5 | 38 | 3.4 | 42 |
| A2 | 56.34 | 31 | 10.7 | 40 |
| A3 | 51.92 | 50 | 6 | 54 |
| A4 | 48.54 | 53 | 4 | 50 |
| A5 | 55.81 | 38 | 16 | 48 |
| A6 | 50 | 4 | 0 | 4 |
| A7 | 42.86 | 24 | 0 | 18 |
| A8 | 44.44 | 15 | 0 | 12 |
| A9 | 37.14 | 22 | 0 | 13 |
| A10 | 41.82 | 32 | 0 | 23 |
>TRINITY_DN124929_c0_g1_i4 from sample A1 / Example spliced isoformGTTTGCTGGAGGGAGGGGGTGGCCGAGGAGGAGGAGGAGGAGGAGGGCCAGGCGACGGGCGACGGATTTAAAAGCAAATCAAGGCGGATCTTAGAAGGTTTCAGAGTCTCAGCTACTGTTTCTGGGCCTGCAAGTTTCGCGGGGTTTTGAACTCCTAACTTTCGGGCTTCGTCTCTGTGCCGATGCGCATTTGTTTTCCT
TCTGATCAAAGATGCGAACAGTAGTGAAAATTATGGATTTCAATAAATTATTTGCATGAAGGGTTAGCCTCGGTTTTTTTTTTTATTAATTAAGGGCACAGGGGTTTCGGTTGTGAATCGAGGACAGTGGCGGAGATATCAGTTGGCTGGGGTTTGGTGAAGGGAGACTGCTGCCGTCTGATGAGGCAGAAGATGATATT
TTAGAGCACTTGATTTATTGGATTTTTTATTTTATTTTATTTGGGAGGTATTTTAGAGATGGAGAGGTTCAACAGCGCCACATTATTGGATATTCGGCAGCTGAATCGGACCAACGCTGCCTTGCAATTCAGTCCCCAGATGGCTATGAGCAATGATAGTTTCTTGATGCTCGATTCGAACCCCAGTCCATCGTCCTCGA
TGGATCTCGGTAGCTTGAACCCATCTCTGTCTTCGAATATAACGTCGGAGTTCTCGTCTCTTCTTGAGTCCACTTCGCAGAATTCGATGAATGTGGGCATGGCGTCTAGTGCCGCAATGCCTTCTCAGCCACAGGCTGTTCAGCACAACGATATGCTGATGCCTGCCGACGAGTGGTCTGGGAACACCACGCCGAGTGCT
CAAAGTTCTCGGCAGGGATTTCAGAGTTCTTCCCCTAGTCAGTGCCAGAGTTCTGTTAGCCAAGGACAGGTCTCAAAGGCGGGGAACGTGGAGAATAACCGAATGCAACAATATGGTTATGATAAGCACCTGTGGGGCGGTTCCCAAAATGCTCATGAAATGTTTGGGATGCCGCAACAGATTAATCGAGACGGGATGTC
GCAAGCAGGTGATAATCAGTCGGCAATACGTGGACACCAACAAGGCTTCCAAGCAGAAATGAGGAAGCCAAACTTTTCTAGCAAGCAATCTGGCCAGGTACTGTCAGGTGTTTCTCAGCAATCTGGTTTTCAAAATCATGCTCAAGCTACTAACGGACAGGCCAGTTATTTACAACAACAAAGACTTTGTCATGGGAGTA
ATGCCTCAGATATATCTTCACAGGAATCAGCTTCCCAGGAAGTGAAAGGTGCTGTTCAACCAATGGACTTTGAACAGAATCAGGCAAGCCAGGTACCAAGTTTCGATGGGGCTACAAAAGTGAACATGCATGCGAGTAACCACTGTTTGCCGCAGCCTCCAGTTTATCAGAGGATGGAAATTGACAACCAGCCGCCAAGG
TTTCCAGGTATGCAGCCCACCAATCAACAAGCAATGTTCCAAAGAGGTCCTGCCCTTAGTCAGCCTCAGAAAGCTATGGACGGGCATAGGATGCAGCAATGTGAACTCCAAGGCGATCCTGTCATGCAGACCATGCGGAGTCTAGGATTTCAAATGCAAGGAATCAACCCTCAGAACACAATGCAAGGCCAGCTTCAAGA
GCAATACTTAAATGCAAATGGCCATCCATTATCGGTTATTCTTCAAAATCAGGCTCCTGCTCAAGGTCAATCCCAGATGCCAACAGTGCCCCAACGTCATGCCCAAAGCCAAGTGGCAAATCAGCAAGCTGCAGTCAATCAACAGGCAGTTTATCAAACTAGACATTTGCAGTCTGGGTCACATCAATCTCCATTTCAAA
CGAACCAGCAGGCTTCTTTTCATTTGGGTCAGCCTCAGGTAAACCAAGTGCACCAGCATGGTGGTAACCCTGGATCACATTTGGCAGGGATCCAACATCTTAGCCAACTTCAAGCAAGAGCACAGAACTCATTATTCCAGGGCGTAAAGATTGGGGGGCGGCACTTATTGCATGGATCACCCAGTGCCCCTGTAAGCTAT
GTTGGCAACGGCATTGATGCAGGAGTGCGAAGTCCAATGCCAGTAGCCGTTGTCTCGAGGTGTCTTGAGATTCTTATGCTTTATATTCAAGAACAGAGAAATCGACCACAGGATAATGGCATAGGATTTTGGAGGAAGCTTGTTCATGATTATTTTGCTCCTGGAGCAACAGAACGCTGGTGCTTATCAAGCTACAGCTC
TTCTCAAATGAGCAGGAATGCGCAAGGCTTGTTTCCAATGGATTATTGGTTCTGCAACATATGTGGAATGCAACCTGGGCGAGGATTTGAATATAGTACAGACGTCCTGCCAAGACTTTTCAAGATCAAGTACGACAGTGGGTTGTTGGAGGAGCTTTTATGCCTTGATATAGCTGAAGAGAGCTACATGGTTCCACCAG
GAAAATGTGTATTAGAGTTTCCACGTGCAGTTCACGAGTCTGTATTTCCTGAGCTACGGGTGGTTCGGTATGGAAAGTTGAGAGTCACATTCAATAGTTCTCTGAAGATATTATCCTGGGAATTCTGTGCTAGGGTGCATGATGAAGTTGTACCACGGAAGAATCTTATTCAGCAGGCGCAGCAGTTAACAAACTTAGTG
GAGGCTGAACATGAGGGTTCCGACAAGGATGCATCAAATTTGAAGGCTCAATGTAACGCGTTCACGTTTTGTGCAAAGCAGCTGAAGTCAAAGTTGGAATCCCCCAATGTAAATGATCTTGGCTTTTCAAAACGCTATGTCAGATGCTTACAGGTTCGTGATATATGCTCCATTCAGTTATAGGGGTTTGCATGATATGT
AGAGCAAGTATATCATATGAAGACTTCTTGGAGATGTAAAAGAACTTGATTCATTTTCTGAACACAACAAGGGTTTGAAAAGTAAAAATTGGGAAAATTTTGAAAGATTCCTCAAAATGTATTGCTGATTAATTTGTGATTCTGGTCTATATGTGTATGTATATGTATGTAGATAACTGAGGGACAAAGTATTCATAACT
TTCAAAAATAAAAAAAAATAAAACTGAAATATGAAACAGAATGGAGTTATTCATTCAACCATAACATGCATCTATTCCTAACTTTTCAAACTTAATTCACTTCAATATCCTTACATTTGTTGTGGATAGTTTAGAACATAGTGGAAAAAATCGGCATCGGCAAAAAATCGGCAAGGGTCCCGAATACAACTTCTCGGCAA
CATCGGCGAAAAAATCGGCAAAAATCGGC
>TRINITY_DN124929_c0_g1_i6 from sample A1 / Example unspliced isoform:GTTTGCTGGAGGGAGGGGGTGGCCGAGGAGGAGGAGGAGGAGGAGGGCCAGGCGACGGGCGACGGATTTAAAAGCAAATCAAgtgagtaatggcttctgtatccttataaatgtagggcaattggctccgtaatcagggcagatttgatatttgctcaaagtctttatttattttgttttggtttcgtttcaagGGCGGA
TCTTAGAAGGTTTCAGAGTCTCAGCTACTGTTTCTGGGCCTGCAAGTTTCGCGGGGTTTTGAACTCCTAACTTTCGGGCTTCGTCTCTGTGCCGATGCGCATTTGTTTTCCTTCTGATCAAAGATGCGAACAGTAGTGAAAATTATGGATTTCAATAAATTATTTGCATGAAGGGTTAGCCTCGGTTTTTTTTTTTATTA
ATTAAGGGCACAGGGGTTTCGGTTGTGAATCGAGGACAGTGGCGGAGATATCAGTTGGCTGGGGTTTGGTGAAGGGAGACTGCTGCCGTCTGATGAGGCAGAAGATGATATTTTAGAGCACTTGATTTATTGGATTTTTTATTTTATTTTATTTGGGAGGTATTTTAGAGATGGAGAGGTTCAACAGCGCCACATTATTG
GATATTCGGCAGCTGAATCGGACCAACGCTGCCTTGCAATTCAGTCCCCAGATGGCTATGAGCAATGATAGTTTCTTGATGCTCGATTCGAACCCCAGTCCATCGTCCTCGATGGATCTCGGTAGCTTGAACCCATCTCTGTCTTCGAATATAACGTCGGAGTTCTCGTCTCTTCTTGAGTCCACTTCGCAGAATTCGAT
GAATGTGGGCATGGCGTCTAGTGCCGCAATGCCTTCTCAGCCACAGGCTGTTCAGCACAACGATATGCTGATGCCTGCCGACGAGTGGTCTGGGAACACCACGCCGAGTGCTCAAAGTTCTCGGCAGGGATTTCAGAGTTCTTCCCCTAGTCAGTGCCAGAGTTCTGTTAGCCAAGGACAGGTCTCAAAGGCGGGGAACG
TGGAGAATAACCGAATGCAACAATATGGTTATGATAAGCACCTGTGGGGCGGTTCCCAAAATGCTCATGAAATGTTTGGGATGCCGCAACAGATTAATCGAGACGGGATGTCGCAAGCAGGTGATAATCAGTCGGCAATACGTGGACACCAACAAGGCTTCCAAGCAGAAATGAGGAAGCCAAACTTTTCTAGCAAGCAA
TCTGGCCAGGTACTGTCAGGTGTTTCTCAGCAATCTGGTTTTCAAAATCATGCTCAAGCTACTAACGGACAGGCCAGTTATTTACAACAACAAAGACTTTGTCATGGGAGTAATGCCTCAGATATATCTTCACAGGAATCAGCTTCCCAGGAAGTGAAAGGTGCTGTTCAACCAATGGACTTTGAACAGAATCAGGCAAG
CCAGGTACCAAGTTTCGATGGGGCTACAAAAGTGAACATGCATGCGAGTAACCACTGTTTGCCGCAGCCTCCAGTTTATCAGAGGATGGAAATTGACAACCAGCCGCCAAGGTTTCCAGGTATGCAGCCCACCAATCAACAAGCAATGTTCCAAAGAGGTCCTGCCCTTAGTCAGCCTCAGAAAGCTATGGACGGGCATA
GGATGCAGCAATGTGAACTCCAAGGCGATCCTGTCATGCAGACCATGCGGAGTCTAGGATTTCAAATGCAAGGAATCAACCCTCAGAACACAATGCAAGGCCAGCTTCAAGAGCAATACTTAAATGCAAATGGCCATCCATTATCGGTTATTCTTCAAAATCAGGCTCCTGCTCAAGGTCAATCCCAGATGCCAACAGTG
CCCCAACGTCATGCCCAAAGCCAAGTGGCAAATCAGCAAGCTGCAGTCAATCAACAGGCAGTTTATCAAACTAGACATTTGCAGTCTGGGTCACATCAATCTCCATTTCAAACGAACCAGCAGGCTTCTTTTCATTTGGGTCAGCCTCAGGTAAACCAAGTGCACCAGCATGGTGGTAACCCTGGATCACATTTGGCAGG
GATCCAACATCTTAGCCAACTTCAAGCAAGAGCACAGAACTCATTATTCCAGGGCGTAAAGATTGGGGGGCGGCACTTATTGCATGGATCACCCAGTGCCCCTGTAAGCTATGTTGGCAACGGCATTGATGCAGGAGTGCGAAGTCCAATGCCAGTAGCCGTTGTCTCGAGGTGTCTTGAGATTCTTATGCTTTATATTC
AAGAACAGAGAAATCGACCACAGGATAATGGCATAGGATTTTGGAGGAAGCTTGTTCATGATTATTTTGCTCCTGGAGCAACAGAACGCTGGTGCTTATCAAGCTACAGCTCTTCTCAAATGAGCAGGAATGCGCAAGGCTTGTTTCCAATGGATTATTGGTTCTGCAACATATGTGGAATGCAACCTGGGCGAGGATTT
GAATATAGTACAGACGTCCTGCCAAGACTTTTCAAGATCAAGTACGACAGTGGGTTGTTGGAGGAGCTTTTATGCCTTGATATAGCTGAAGAGAGCTACATGGTTCCACCAGGAAAATGTGTATTAGAGTTTCCACGTGCAGTTCACGAGTCTGTATTTCCTGAGCTACGGGTGGTTCGGTATGGAAAGTTGAGAGTCAC
ATTCAATAGTTCTCTGAAGATATTATCCTGGGAATTCTGTGCTAGGGTGCATGATGAAGTTGTACCACGGAAGAATCTTATTCAGCAGGCGCAGCAGTTAACAAACTTAGTGGAGGCTGAACATGAGGGTTCCGACAAGGATGCATCAAATTTGAAGGCTCAATGTAACGCGTTCACGTTTTGTGCAAAGCAGCTGAAGT
CAAAGTTGGAATCCCCCAATGTAAATGATCTTGGCTTTTCAAAACGCTATGTCAGATGCTTACAGATAGCTGAGGTAGTTAACAGCATGAAAGACTTAATCTCTTTTGAGAAGAAGACTCATCTTGGACCAACTGAAAGCTTGAACCAATTTCCAACAATAAGGAAGCTGCACTCAGAAGGGATGCTTCAACAGTCATCT
GTTACTCAAGTCGTGAGTCAGCTTACACAAGGTTCAGGGAATTCAAATTCCCCATATCCAAAAATGGCATCAAGGTTGTCTTTGCCAATGAGGCAAGGAATCAGTTTTAGTCAAACACCATCCTCTGTTCTTCAGGGCAATGATCCATTGTTGACAAAGCCACCTTCAGCCATGAATCCATTACATGTAACGCTAAGAAA
TCAGTTTGACGCACGGAATCAAAGTTTGATGCAAACACAAGCAGGCAATCAAATGCAACCTCCATCTGTTTCACATGTAGATTCGGTTAGTCAGGGGCAGTCACACAGTAATAACCAATTTCTTTCTCAATTCACACAACAGGCACCCTCATCTTTGCAAGGACAGCCTCTAGGCCAGGTACAGTCAGCTGCCTCTGGTC
AAATTTCCTCTCAGATTTTGGGTTGTCAGTCTCAGAATATTAACCACTTGGGCCAGCAAATGTTTGATCAAGGTATTGCAAAGCAGATTAATTTTCAGCCTTCAAATCAAGTAATAACTCAGTCAAGATCCTTGAATCGAACAGGGCAGCAAAGCTTGCCGGGCACTCCACAAAGTGAGATGAGTGATATGAGGTCAAAC
ACATAATGGACAATAGCTAATATTTCCCCACTTATTTGTGGATGTGTGTATTATATTTCATTGTCAGGACTTTCTTGTATGGTTGAAGTTGCAAGGTTTTGGCAATCAGGTAATTGCATTTGCTTGTTTCATGATTTCACCTGATTCTTTTTAACGTAGCTATTTTTAGATATAACACCAAAAAGGGTTTATGATCCTGG
AATGTCTATTTGGTCCCCATTAAAGAGGATCTTATGAAGAGATTGTTCTAGCGATTGCTCTACAAACCAAATCATGGTTTGTGTGTGTGTCTATATATATATAATCTATATAGTATATATAGACACGTATATATAGTGTTTTGCGAAAAGCAAGGAATTGTACCCTACTCAGGGTAATTGTTTAGTATCTGATAAAACTT
TTTATTGTATATTAGAGCTTTTTGA