sp|Q9LSF5|PP254_ARATH ----> Pentatricopeptide repeat-containing protein At3g25210, mitochondrial


Intron 1 GTAATTGATT ... TCCCTTCTAG

SampleRetention score (%)Exon junction reads5'ss reads3'ss reads
A186.22183
A278.345.52016
A372.037.51814
A492.310.565
A560.584.575
A681.73168850
A785.5510.56753.5
A879.7619.57373
A982.66116730
A1076.41155729



>TRINITY_DN109096_c0_g1_i2 from sample A2 / Example spliced isoform
AAATATCACTACTTTGCAAATTCAATAGAAGAGAAAACTTCATCAGTAAATTACATTTTTCAGAGATATAAATCCATTGCCCCTAGGCTCTCTTGGCCCTTTTGATGCCGATGGTAAGTTGGTTTGAAGGAGAGCAGGCTATGGATTTGTTGCTGTTAGTGCCGAAGCACAGGAGAGGAGAAACGGAGAACAGCGGCAGA
GCAAGGCACACATTCAAGTAAAATGGCGACAAACTTCATAATTCAGCTTATAAAAAGAGGAAACTCCGGTCAGTCCGGTAAGTTTTCTGTGTTTTCTCTCTTGCATCAGTCGCCACTTTCTTCAAGATTCAATACACTTGAATCATTCAGGTATTGGTTATGTCCTTCTCTGTGTTCATATCATGCAAATCCAAGCCACC
TGCAAGACGCCAGATCATCGCAAAGTTCCTATTGTGGTAATTCGAATGTCCACAAGAATGAACGAAGAATAACCCCTGGACCACCTCCACCCAGGGATTCAACCCCCATAGGAAAACGGTTTGAGAATTGGGTCCAAAGTCTGAAGCCCGGTTTCCAGCCTGAAGATGTAGCCCATGTCCTACAAGAGCAGACAGACCCT
GATCTTGCCCTGGACATATTCCAGTGGACTTCCCAACAGCGAACCTACAAACACAACCACCAAACATATGAGCTCATGATACAGATATTGTCCTCTGGAAAACGTTACAAGCAGATGGAGAGGCTCATGGAAGATGTCATGGCAGGAGCTTGCATAGGCAGTGAGTCTCTGTTTAATACCATGATTTATAATTACTGTGA
CCTTAGAATGATAGGGCCTGCCATCAATGTATACAAGAAAATGCAGAAGGAGCCCAACTGCAAACCCACATTGAAAACATACAATTTGCTGTTGAATGCTCTTGTGGGCAGGTTTTCAAGTTTGACTGTCTGTTTCGTGTATTTGCGCAGTGTTCGGTCTCTGTACAAGCAGATGAAAGCTGCTGGTGTTGCTCCCAATA
TCATCACATTGAATTTGCTTATCAAAGCTTACTCCAGGGCCTTAGAAATGGAAGAAGCTGTCAGGCTTTTTCGCGAGATGGGTCTATATGGGTGTAGCCCAAATCCATATACCTTTAACTACATTATTCGAGGGCTGTGTGAGAAAGGTAGGATGAAAGAAGCTTGGGAGTTTTACGAAGACATGCTCCGCAAAGGGTTG
TTTCCTAGTAAGCGCGTTTATAATGTGCTTGTCAGCAGTCTTTCACTCGAAGGAAGACTGCAGGATGCCGGTAAAGCTCTTGTAGACATGACAGATAAGGGCATGGTGCCTGATTACATCACTTACAGGACTGTTATGGATATGCATTGCAAGAAAGGCAGGCAGCGGGAAGCTTCTAAACTTCTTCGTGAACTTCGTGA
TAAGGGCCATTGCCTTGATGAATTAACTTACAAGAGATTGGTTAATGGCTTCAATTTGATAGACTGATGGGTATGGAAAACTCTGGAAGTAATGAGGCGCATTACCAGTTCATCGTACCAAGATTCAAACAGTGTATCTTCAGTTCCATATGATGGCTTTCCAGAGCACTTTGGAAGATGCGGATTCTACTGGTGCGAGG
GGTGTAGAATGTACTGATACAAAGGCAAGCTGCAAGAGGATAACAATTCTTGAAATCGAGAATAACCAGGTGCCGAGATTTGTTGCATTTGGAACAATAGGGTTTTGCACATAAAATGTTCTAAATTTGAGAAGTATATAAAATCGCTTATTCCAGGAATATATCTCAGGATTATTTGACTAGTATCTTGATTATTTAGA
ATGTATATGAACCTTCCTTAATGGGCTTTATTAATTTATGAGATGACCGCTTTAGATTCTGTTACCCTCTTTAAAGGGGGAAAAGTCAATGTTCACAGGACTCGTGTTCTTGATTTGAACTTGTATCAAGTTGTTATAACTCGTGCCTTTCATTTGAATTGTTTTTTCTTCTGAGCCTCCTTTATATTTTTGTCAGATTG
TCACTGTTCCCTTTTCATTATTGTACTCTATCAATTTGACACAACATTGTTTTGTCCGAGTCATAAGGGTGCTAGATGGGAGGAACTCTGAAATACCATAATATGTCATTTTCAATCCCTTGATGATTTTTTGAAGCATCTCATCTCTGGAATGATTTCTTTGATCTGTTCTTCTTTTTGAAATTGGACTGTAAGTTGCA
TTTAGAAAAAACAATAGGAGAGGATTTTACTTCTGGCAAATTTGCACTCACAGTTTAAAACAAACGAAAAATCTAAGCTAAAGGTGATGGCATGGTTCAACGGAGCTGGTGCTTTATTTCATGATGAACATACATGCTTAAAATATATTATATGAAATGCATCCTCTGCTTAGCAGGTTAGACCTGGGTTGTGAATCAAA
CATTCCACTCACAATTGAGAGGAGAAAAATTCACAAGTCCTACAGAAAGGATGAATAATGGATGCATAGGTGATGATTCGTCTATGCCTCAAGAATCATTTGGCTTTGGCACCTTTTGGAGGAGGCAGAAGACAGTGATGGGGCATCTGATAAAATCTCTGCATGAATTTTACCATTATATTTCTGCACTTCTGTGGTTC
ACTTCATGAAAATTTTATTAACAG


>TRINITY_DN109096_c0_g1_i1 from sample A2 / Example unspliced isoform:
AAATATCACTACTTTGCAAATTCAATAGAAGAGAAAACTTCATCAGTAAATTACATTTTTCAGAGATATAAATCCATTGCCCCTAGGCTCTCTTGGCCCTTTTGATGCCGATGGTAAGTTGGTTTGAAGGAGAGCAGGCTATGGATTTGTTGCTGTTAGTGCCGAAGCACAGGAGAGGAGAAACGGAGAACAGCGGCAGA
GCAAGGCACACATTCAAGTAAAATGGCGACAAACTTCATAATTCAGCTTATAAAAAGAGGAAACTCCGGTCAGTCCGGTAAGTTTTCTGTGTTTTCTCTCTTGCATCAGTCGCCACTTTCTTCAAGATTCAATACACTTGAATCATTCAGGTATTGGTTATGTCCTTCTCTGTGTTCATATCATGCAAATCCAAGCCACC
TGCAAGACGCCAGATCATCGCAAAGTTCCTATTGTGGTAATTCGAATGTCCACAAGAATGAACGAAGAATAACCCCTGGACCACCTCCACCCAGGGATTCAACCCCCATAGGAAAACGGTTTGAGAATTGGGTCCAAAGTCTGAAGCCCGGTTTCCAGCCTGAAGATGTAGCCCATGTCCTACAAGAGCAGACAGACCCT
GATCTTGCCCTGGACATATTCCAGTGGACTTCCCAACAGCGAACCTACAAACACAACCACCAAACATATGAGCTCATGATACAGATATTGTCCTCTGGAAAACGTTACAAGCAGATGGAGAGGCTCATGGAAGATGTCATGGCAGGAGCTTGCATAGGCAGTGAGTCTCTGTTTAATACCATGATTTATAATTACTGTGA
CCTTAGAATGATAGGGCCTGCCATCAATGTATACAAGAAAATGCAGAAGGAGCCCAACTGCAAACCCACATTGAAAACATACAATTTGCTGTTGAATGCTCTTGTGGGCAGGTTTTCAAGTTTGACTGTCTGTTTCGTGTATTTGCGCAGTGTTCGGTCTCTGTACAAGCAGATGAAAGCTGCTGGTGTTGCTCCCAATA
TCATCACATTGAATTTGCTTATCAAAGCTTACTCCAGGGCCTTAGAAATGGAAGAAGCTGTCAGGCTTTTTCGCGAGATGGGTCTATATGGGTGTAGCCCAAATCCATATACCTTTAACTACATTATTCGAGGGCTGTGTGAGAAAGGTAGGATGAAAGAAGCTTGGGAGTTTTACGAAGACATGCTCCGCAAAGGGTTG
TTTCCTAGTAAGCGCGTTTATAATGTGCTTGTCAGCAGTCTTTCACTCGAAGGAAGACTGCAGGATGCCGGTAAAGCTCTTGTAGACATGACAGATAAGGGCATGGTGCCTGATTACATCACTTACAGGACTGTTATGGATATGCATTGCAAGAAAGGCAGGCAGCGGGAAGCTTCTAAACTTCTTCGTGAACTTCGTGA
TAAGGGCCATTGCCTTGATGAATTAACTTACAAGAGATTGGTTAATGGCTTCAATTTGATAGACTGATGGGTATGGAAAACTCTGGAAGTAATGAGGCGCATTACCAGTTCATCGTACCAAGATTCAAACAGTGTATCTTCAGTTCCATATGATGGCTTTCCAGAGCACTTTGGAAGATGCGGATTCTACTGgtaattga
ttaaccctctggtacaaatcagccgctatctgttgtggcactctgataatacattttccaagattgtcctggtaaatcactggaaagaggaagacgctgattaaatgcttatcccactcccttctagGTGCGAGGGGTGTAGAATGTACTGATACAAAGGCAAGCTGCAAGAGGATAACAATTCTTGAAATCGAGAATAA
CCAGGTGCCGAGATTTGTTGCATTTGGAACAATAGGGTTTTGCACATAAAATGTTCTAAATTTGAGAAGTATATAAAATCGCTTATTCCAGGAATATATCTCAGGATTATTTGACTAGTATCTTGATTATTTAGAATGTATATGAACCTTCCTTAATGGGCTTTATTAATTTATGAGATGACCGCTTTAGATTCTGTTAC
CCTCTTTAAAGGGGGAAAAGTCAATGTTCACAGGACTCGTGTTCTTGATTTGAACTTGTATCAAGTTGTTATAACTCGTGCCTTTCATTTGAATTGTTTTTTCTTCTGAGCCTCCTTTATATTTTTGTCAGATTGTCACTGTTCCCTTTTCATTATTGTACTCTATCAATTTGACACAACATTGTTTTGTCCGAGTCATA
AGGGTGCTAGATGGGAGGAACTCTGAAATACCATAATATGTCATTTTCAATCCCTTGATGATTTTTTGAAGCATCTCATCTCTGGAATGATTTCTTTGATCTGTTCTTCTTTTTGAAATTGGACTGTAAGTTGCATTTAGAAAAAACAATAGGAGAGGATTTTACTTCTGGCAAATTTGCACTCACAGTTTAAAACAAAC
GAAAAATCTAAGCTAAAGGTGATGGCATGGTTCAACGGAGCTGGTGCTTTATTTCATGATGAACATACATGCTTAAAATATATTATATGAAATGCATCCTCTGCTTAGCAGGTTAGACCTGGGTTGTGAATCAAACATTCCACTCACAATTGAGAGGAGAAAAATTCACAAGTCCTACAGAAAGGATGAATAATGGATGC
ATAGGTGATGATTCGTCTATGCCTCAAGAATCATTTGGCTTTGGCACCTTTTGGAGGAGGCAGAAGACAGTGATGGGGCATCTGATAAAATCTCTGCATGAATTTTACCATTATATTTCTGCACTTCTGTGGTTCACTTCATGAAAATTTTATTAACAG