NA ----> NA
Intron 1 GTAAAGCCCT ... TGTGTGACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 13.45 | 1197 | 186 | 132.9 |
| A2 | 10.76 | 984 | 118.7 | 149 |
| A3 | 14.21 | 1400 | 231.9 | 205.3 |
| A4 | 11.55 | 956 | 124.9 | 103.9 |
| A5 | 12.52 | 713 | 102 | 139.7 |
| A6 | 11.45 | 5189 | 670.8 | 1000.9 |
| A7 | 11.74 | 5189 | 690.4 | 1013.2 |
| A8 | 11.44 | 3309 | 427.7 | 582.1 |
| A9 | 12.8 | 5588 | 820.4 | 939.8 |
| A10 | 11.61 | 5203 | 683.6 | 1083 |
>TRINITY_DN68358_c0_g1_i2 from sample A1 / Example spliced isoformCTGACATGGCTTATTAGAAAATGGCGGGAAATCAGCAAATCAAACAGCTGCACGTATGGCGGGAATGGTCATTGCTTGGATCTATATAACGCCTCATCATTTTCTATCAAACACACCGACTCTTCTCTGCCTTCTGCCCCAAGTCTTTCGATCTTCTCAAGTTTTCTGCAATTACAGTCTGCAGGTCGTCGGGTCGAATC
TCTCGAAGCTAACTCTTTCACGCCCGATTCCAAGCCGAGTCGAAGGGTACAGAAGTCAGCCATGGTTATTCACAACATCCGGTCCAGGGTCAACAGAAAGCCACCGGCTGTTGCGGCGGAGCTCAAGTCGGTGTTCACAGTGATAAAACTGACTACGGCAAAGCCGGAGGGCGGTGATGAGGTCGGTGTGGGGGTACCGA
CGGTCTCCGTCCGGGGCGTCCATCCGACGGAAGAGCAGGCATATGCGGCGGCGATGCTGGACCTCCTTTACAGCCTTGAGGTAGCCGAGGGTGACCCTCTGCCCAAGGTGCGTGCCATCGCCAAGACCAAGACATTGCCTGCAAAGGACCGGCTGAAAAGCATCCAATCCTCCTGCCAGGACTCTGAGGCCGCTGAGCGT
TTCGAATTTCTGGTGCGGCGATCGAGTGTTTTCCCTGAGGAGGAGGGGGAAAAGGGCGACATAGACATGGAGGCTCTGCTCGACGTCCCTCTCATGCCCTGCACCCTCTGGGACTCCGACGACGATGAAGAGGACTACAACCCTTCGTCTTCTTCAGATTCTGAAGACGACGAAGTGGACGAGGATGATGAAATGGAGCT
CGTTGATGAAAGGGATGTGTTCGAGGGTATCGAAGGGTCCGGCGCCACGGGTAAAGATGAAGAAGTTCCCCAGGCTTGAAAATGGCAATCCAGGTCACTTTGCTAGGGTTTTGCAATTTTATTTTGTAGGGTTTGATATCTTCTTGTAAAGGGTTCGAAAGAAAGTCCTCGAGTGTCGCTGAATACGGGAGTTTTGCAAT
GTAGCGCCTGTTTATTGCTTCAGTCCACGGATATCTTGGTTTTTTTGTAGGGATGGATTTCAGGGCTACCGATGAAAATGGTTCCATTGATTTAGGATTTTGAATATAGAAATACTGCTAATTTCAATATAACTGAGTTTTGTTTATGGGCTATATTCCAGTTAAAGATACAGTACAACTGAATTTTTTTATGAACTATA
TTGCAACTGAATTTTGTTTATGGGCTATATTCCAAGAAGTATAGTTAAAGATTTATACTACAGGATTCATCAAGTTTGTG
>TRINITY_DN68358_c0_g1_i1 from sample A1 / Example unspliced isoform:CTGACATGGCTTATTAGAAAATGGCGGGAAATCAGCAAATCAAACAGCTGCACGTATGGCGGGAATGGTCATTGCTTGGATCTATATAACGCCTCATCATTTTCTATCAAACACACCGACTCTTCTCTGCCTTCTGCCCCAAGTCTTTCGATCTTCTCAAGTTTTCTGCAATTACAGTCTGCAGGTCGTCGGGTCGAATC
TCTCGAAGCTAACTCTTTCACGCCCGATTCCAAGCCGAGTCGAAGgtaaagccctacgcctggttcccactctagtctctagcgacagtttgtgtatttgttttctggctaacgaattgggtgttgtgtgacagGGTACAGAAGTCAGCCATGGTTATTCACAACATCCGGTCCAGGGTCAACAGAAAGCCACCGGCTGT
TGCGGCGGAGCTCAAGTCGGTGTTCACAGTGATAAAACTGACTACGGCAAAGCCGGAGGGCGGTGATGAGGTCGGTGTGGGGGTACCGACGGTCTCCGTCCGGGGCGTCCATCCGACGGAAGAGCAGGCATATGCGGCGGCGATGCTGGACCTCCTTTACAGCCTTGAGGTAGCCGAGGGTGACCCTCTGCCCAAGGTGC
GTGCCATCGCCAAGACCAAGACATTGCCTGCAAAGGACCGGCTGAAAAGCATCCAATCCTCCTGCCAGGACTCTGAGGCCGCTGAGCGTTTCGAATTTCTGGTGCGGCGATCGAGTGTTTTCCCTGAGGAGGAGGGGGAAAAGGGCGACATAGACATGGAGGCTCTGCTCGACGTCCCTCTCATGCCCTGCACCCTCTGG
GACTCCGACGACGATGAAGAGGACTACAACCCTTCGTCTTCTTCAGATTCTGAAGACGACGAAGTGGACGAGGATGATGAAATGGAGCTCGTTGATGAAAGGGATGTGTTCGAGGGTATCGAAGGGTCCGGCGCCACGGGTAAAGATGAAGAAGTTCCCCAGGCTTGAAAATGGCAATCCAGGTCACTTTGCTAGGGTTT
TGCAATTTTATTTTGTAGGGTTTGATATCTTCTTGTAAAGGGTTCGAAAGAAAGTCCTCGAGTGTCGCTGAATACGGGAGTTTTGCAATGTAGCGCCTGTTTATTGCTTCAGTCCACGGATATCTTGGTTTTTTTGTAGGGATGGATTTCAGGGCTACCGATGAAAATGGTTCCATTGATTTAGGATTTTGAATATAGAA
ATACTGCTAATTTCAATATAACTGAGTTTTGTTTATGGGCTATATTCCAGTTAAAGATACAGTACAACTGAATTTTTTTATGAACTATATTGCAACTGAATTTTGTTTATGGGCTATATTCCAAGAAGTATAGTTAAAGATTTATACTACAGGATTCATCAAGTTTGTG