sp|Q7F2E4|CSB_ORYSJ ----> DNA excision repair protein CSB
Intron 1 GCTGAAAACA ... TCCTGCACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 78.57 | 9 | 31 | 35 |
| A2 | 70 | 12 | 27 | 29 |
| A3 | 62.83 | 21 | 38 | 33 |
| A4 | 61.62 | 19 | 31 | 30 |
| A5 | 59.09 | 9 | 15 | 11 |
| A6 | 33.33 | 4 | 3 | 1 |
| A7 | 71.43 | 3 | 7 | 8 |
| A8 | 60 | 1 | 1 | 2 |
| A9 | 88.24 | 1 | 7 | 8 |
| A10 | 33.33 | 7 | 3 | 4 |
>TRINITY_DN97708_c0_g1_i1 from sample A4 / Example spliced isoformTTAGCCTTTTTTCTGGTGGAATTGAGTACCATATAAAACAGGCATGAAAGAGGAGGACAGACTTTTGCTGACTAGCTTAGGTGTCGTATCTGCTAACCCAGATGACATTGAGCGCCGGTTGCTTGCCAAGGAAATCAATGGTGGAAAAACTCCTGAGAGAGAAGAAAGAGATCAGGAAAGTTTTCTTACGAAGGTGCAAA
TTCGTGCTCAATTAAGGGCAGTGGAGGCTGAAATAGCTGCAGTTGCAGCAGGCCTTGAAATAGTTCAAAGTGTCACAGACAAAGATTCAGAGAGTTCAGAAGGTGAAAAAGATGAAAATGATCAAGACTTGAGTGAATATAGGCCTTTTGAAGCTGTTGGAGGAGTGCTTCAACGAGCACTAGCTACTGAAAGGCTTAGA
AGCCTCAAACAGAAAAGAGGACAGCTTAAAAAGCAGCTGAAAGTTTTTGAGGGAGATGGTGAGACAGAGGAACTTGAGGAACATAAGGTGCTTCTGGAATCAGTGAAGAATAAAGAAGAAACAGTGATTAAGGGAACTGGACGTCTGTTGGTTAAGCCACAAAGCGGGAAAAAGAAGAATGTTTCATTTCAGGAGGATGA
TGATTTTGATGCAGTATTGGATGCAGCAGCTTCAGGGCTCATTGAAACTGAACGTGATAAGCTTATCCGTAAAGGAGTGCTGACACCTTTTGACCAAGTTAAAGGTTTTGAACGCCGTGTTCAAAGGTCTCTCCCAACAAAGGATGATAGGGGCAATCTTTCTATAAATTCTGTCTCAAATACTTCCATATCATTTTCTG
CATTGTCAATAGCTCGACCTTCAACGAAGTTGCTTGATGCAGCAGATTTACCTAAATTGGATCCTCCCACACAAGCATTTCGAAGGCTTAGAAAGCCTGTCAATATTAAAGAATCCAATGAGGTTGAGAAACCTTCAAAGGACCAAACAAACCATTTAAGAAAGCGAAAAGGACGACCTTTACCTGATCAACACTGGAGA
AAAACTACATCAAGTGATGATGAGCCATGGAGTGATGCTGATCATCATGAAAGCAATGATCTGGCAGAAGATGTCTTGCAAAAACAGAAAGATAGGAATAAAAAGCGGGAAGGATCAGATTTAGCAGAAGATGTCTTGCAAAAACAGAAAGATAGGAATAAAAAGCGGGAAGGATCAGATTTAGCAGACTATGATTGCAA
AATTGAAGGTTACGAGGAATCTATAGACGATGCTGCCAGTGTTGAGGAAGACATCGTAACTCTTGAAGGAGGATTGAAAATTCCTGCTAGAATCTTTGACAGTCTGTTTGATTATCAGAAAACAGGAGTAAAGTGGCTATGGGAGCTACACAGCCAGAGGGCAGGGGGAATAATAGGAGATGAAATGGGTCTTGGAAAAA
CTATTCAGGTGATAGCTTTTTTGGCAGCTCTGCACTTCAGTGGTATGTATAAGCCTAGCATAGTTGTATGTCCAGTAACCCTCTTACGCCAATGGAGACGGGAAGTCCGAAAGTGGTACCCACACTTCCATGTGGCAATATTGCATGATTCTGTTCCAGTATCTTCCTGGAAGAGAAAGAAAGCAAAACAGATAAAAGGT
GGTGATGAAGATGAACCCTCATTAGTCAGTGACGAGGAGGAAATTCAGCCTGTTAAAGGTCCAAACAAGTGGGATCTTTTGATTAACCGTATAATGGAATCTCGATCTGGATTGCTCATCACTACTTATGAACAGCTTCGTCTCTTAAGGGAGAAATTGCTGGACATGGAATGGGGGTATGCTGTTTTGGATGAAGGGCA
CCGCATAAGAAACCCAAATGCAGAAATCACCCTTGTGTGCAAACAACTGCAAACTGTGCATCGTATTATAATGACTGGTGCCCCAATTCAGAACAAACTTGCAGAGTTGTGGTCACTGTTTGATTTCGTCTTTCCTGGAAAGTTGGGAGTGTTGCCCATATTTGAGGCCCAATTTGCTGTACCGATTGCAATTGGTGGTT
ATGCTAATGCAAGTCCATTACAAGTTTCAACTGCTTATAAATGTGCCGTGGTTCTGAGGGATCTGATAATGCCCTATCTGTTACGCCGTATGAAAATGGATGTAAATGCACATCTTACAAAGAAAACGGAGCATGTTCTTTTTTGTAGCTTGACTGAGGAGCAGCGGAAAGCATATCGTGCTTTTCTTGCAAGTTCTGAT
GTGGAGCAAATATTTGAAGGAAACAGAAATTCACTTTATGGAATAGATATATTGCGAAAAATATGCAATCATCCCGATTTGCTGGAAAGGGACCACAGCGCTACACATCCAGATTTTGGAAATCCAGAACGCAGTGGAAAACTGAAGGTGGTTTCTCAAGTCTTGAAGGTATGGAAGGATCAAGGTCATCGAGTTCTGAT
TTTTTCTCAGACACAGCAAATGCTGGATATCATTGAAAACTACCTAGTGTCTGAAGGCCTAACTTATAGGCGAATGGATGGGTTAACTCCTGTCAAACAACGTACAGACTTAATGGATGAATTCAACGAGTCTACACATGTTTTTGTCTTTATTTTAACTACGAAGGTTGGGGGTCTAGGAACAAACTTGATTGGGGCAG
ACAGGGTAATAATTTTCGATCCAGATTGGAATCCTTCGACTGATATGCAGGCAAGGGAGCGTGCTTGGCGTATAGGTCAGACCCGAGATGTGACTATTTACAGATTGATTACCCGTGGAACAATTGAGGAGAAAGTTTACCATAGACAGATATACAAGCATTTCCTGACCAACAAGATCCTCAAGAACCCTCGACAGCGG
AGGTTCTTTAAATCAAGAGACATGCGGGATCTTTTCACTTTACAAGATGACCTGGGTCAGGATAAGACAGAGACATCTAGCATTTTCAGTGAATTGGCTGGAGAAATAAAGTTAGGTGATCAGAACGAACAACTCATACAATCAATGTCTTCTGTTGCTGTACAAAGTGAGAATACTTCAACTCGTGGCAAGCGTAATGG
GGGCCGAGGCAAAAATATATCTAGAAGTAAAGGGAAAGAAAAGGTTGAGCCTAAAGAAGAGGCCTCAAATAAGGATGATTCTGATATGTTAAAAAACCTGTTGGCTAATGGAATTCATAGTGCTATGGATCACGATGCTATTCTTGACATCAATGATGAAGAGAAGATGAAGCTCGATGATGAAGCTTCTCTAGTTGCAC
AAAGAGCAGCTGAAGCTTTAAGACAATCACGGATGCTCAGACGTCAAGATAGCATATCAATCCCGACATGGACAGGAAGGTCTGGTGCGGCTGGAGCTCCAGCAGATGTAAGGAGGAGATTTGGATCAAAAATAAATTCCCAAGTGGTTTCTGGTTTAAGTTCTACTGAATGTTCCCGGATCAGTGGAGCAGGTACATCC
CAGGGTTCTTCAACAGGCCTTGCTGGAGCCTCCTTGGGGAAGGCCTTGAGTTCTGGTGATCTTCTTGCACGGATACGGGGTAATCGAGAAAGTGCTATAGTTGCAGGGATAGAGTGCCAGAGAGTATCTGGAGCAGCAGCCCCTAGCCTGGTGAATGGATCTGAAAGGACACCAGGAAGCAACAGGCCTACTACCAGTCG
CATTCCTCCAGTATCTATTCAGCCTGAGATTCTAATTCGTCAGATGTGTACATTCATACAGCAGACTGGTGGAAGTGCACGGTCAGCAAATATTGTTGAGCATTTTAAAGACATAGTTCCATCAAAAGATATGGCTTTGTTCAAGAAACTTTTGAAAGAAATTGCTGTGTTGAGAAAAGAAGGTGGCGAAGGTGAGTGGG
TATTAAAACCAGACTACCAGATCGACAAATTTGATGCTGGTTGATATTGTAATTTTTTCAGGAGTTCTTGCAGTTACAGCTTTTAGTGGTATGTCCTATTTTGTGACCTTTCAGTCTCATATATTAGTACTGCTGCCACATTGAGAGCTTTTGTTCTCCGACAAGGTCCTTTTCTGTTCTCATAACCTGTAAAATGTTGT
GCAATAAGAACAAATTTGGAATCCATTCCACTTGACTTGTATAGGGGACAAGTTTGACATCCGGGTTTACGTCTCTAATTACCATCTGACATAGGTGAGCGGGTCTATTTTTGAATACTTCCACAACTCTTTTGATAAATCTGGTCTGGAAGTACTCTTTGTAATTGAATTTGTAATTAATTTTGAGAAATTATTACTGG
AGGCCACAACTGCTGGTTGAATTTTTTAGATGTACATGAGCC
>TRINITY_DN97708_c0_g1_i6 from sample A4 / Example unspliced isoform:AGAAAGTTCATCTGTGTTAACAGTGCATTGGGCTGTTGATATTTCTATACACTTCATCAATCGCCCCCACATCTCCATTGCAGAAAACTCAGGTCTCAAGGGGGCACAGGAAATTGATCAGAATACACAGAGTCGCACCATGCTTTTTACCCCATAATTAACGCGTGACAATAGAGGCGGGCCACTAGCTGCAGTAGTCA
ATCAAACAAGTTCTACTTTCTCTTCAATGTTTCCGGTGCTCAAGAGAAAATTCTCTACTGATTTTTGAGGAAACAGTTTCCCTCTAGCTGACTAAATCAGAGATGTGACGTTTTTCCTGTTATTAACTTATTTGCATGCCAAAGCAGTTTAGCCTTTTTTCTGGTGGAATTGAGTACCATATAAAACAGGCATGAAAGAG
GAGGACAGACTTTTGCTGACTAGCTTAGGTGTCGTATCTGCTAACCCAGATGACATTGAGCGCCGGTTGCTTGCCAAGgctgaaaacaaagctcatgaaaacatcattcatcctgcacagGAAATCAATGGTGGAAAAACTCCTGAGAGAGAAGAAAGAGATCAGGAAAGTTTTCTTACGAAGGTGCAAATTCGTGCTCA
ATTAAGGGCAGTGGAGGCTGAAATAGCTGCAGTTGCAGCAGGCCTTGAAATAGTTCAAAGTGTCACAGACAAAGATTCAGAGAGTTCAGAAGGTGAAAAAGATGAAAATGATCAAGACTTGAGTGAATATAGGCCTTTTGAAGCTGTTGGAGGAGTGCTTCAACGAGCACTAGCTACTGAAAGGCTTAGAAGCCTCAAAC
AGAAAAGAGGACAGCTTAAAAAGCAGCTGAAAGTTTTTGAGGGAGATGGTGAGACAGAGGAACTTGAGGAACATAAGGTGCTTCTGGAATCAGTGAAGAATAAAGAAGAAACAGTGATTAAGGGAACTGGACGTCTGTTGGTTAAGCCACAAAGCGGGAAAAAGAAGAATGTTTCATTTCAGGAGGATGATGATTTTGAT
GCAGTATTGGATGCAGCAGCTTCAGGGCTCATTGAAACTGAACGTGATAAGCTTATCCGTAAAGGAGTGCTGACACCTTTTGACCAAGTTAAAGGTTTTGAACGCCGTGTTCAAAGGTCTCTCCCAACAAAGGATGATAGGGGCAATCTTTCTATAAATTCTGTCTCAAATACTTCCATATCATTTTCTGCATTGTCAAT
AGCTCGACCTTCAACGAAGTTGCTTGATGCAGCAGATTTACCTAAATTGGATCCTCCCACACAAGCATTTCGAAGGCTTAGAAAGCCTGTCAATATTAAAGAATCCAATGAGGTTGAGAAACCTTCAAAGGACCAAACAAACCATTTAAGAAAGCGAAAAGGACGACCTTTACCTGATCAACACTGGAGAAAAACTACAT
CAAGTGATGATGAGCCATGGAGTGATGCTGATCATCATGAAAGCAATGATCTGGCAGAAGATGTCTTGCAAAAACAGAAAGATAGGAATAAAAAGCGGGAAGGATCAGATTTAGCAGAAGATGTCTTGCAAAAACAGAAAGATAGGAATAAAAAGCGGGAAGGATCAGATTTAGCAGACTATGATTGCAAAATTGAAGGT
TACGAGGAATCTATAGACGATGCTGCCAGTGTTGAGGAAGACATCGTAACTCTTGAAGGAGGATTGAAAATTCCTGCTAGAATCTTTGACAGTCTGTTTGATTATCAGAAAACAGGAGTAAAGTGGCTATGGGAGCTACACAGCCAGAGGGCAGGGGGAATAATAGGAGATGAAATGGGTCTTGGAAAAACTATTCAGGT
GATAGCTTTTTTGGCAGCTCTGCACTTCAGTGGTATGTATAAGCCTAGCATAGTTGTATGTCCAGTAACCCTCTTACGCCAATGGAGACGGGAAGTCCGAAAGTGGTACCCACACTTCCATGTGGCAATATTGCATGATTCTGTTCCAGTATCTTCCTGGAAGAGAAAGAAAGCAAAACAGATAAAAGGTGGTGATGAAG
ATGAACCCTCATTAGTCAGTGACGAGGAGGAAATTCAGCCTGTTAAAGGTCCAAACAAGTGGGATCTTTTGATTAACCGTATAATGGAATCTCGATCTGGATTGCTCATCACTACTTATGAACAGCTTCGTCTCTTAAGGGAGAAATTGCTGGACATGGAATGGGGGTATGCTGTTTTGGATGAAGGGCACCGCATAAGA
AACCCAAATGCAGAAATCACCCTTGTGTGCAAACAACTGCAAACTGTGCATCGTATTATAATGACTGGTGCCCCAATTCAGAACAAACTTGCAGAGTTGTGGTCACTGTTTGATTTCGTCTTTCCTGGAAAGTTGGGAGTGTTGCCCATATTTGAGGCCCAATTTGCTGTACCGATTGCAATTGGTGGTTATGCTAATGC
AAGTCCATTACAAGTTTCAACTGCTTATAAATGTGCCGTGGTTCTGAGGGATCTGATAATGCCCTATCTGTTACGCCGTATGAAAATGGATGTAAATGCACATCTTACAAAGAAAACGGAGCATGTTCTTTTTTGTAGCTTGACTGAGGAGCAGCGGAAAGCATATCGTGCTTTTCTTGCAAGTTCTGATGTGGAGCAAA
TATTTGAAGGAAACAGAAATTCACTTTATGGAATAGATATATTGCGAAAAATATGCAATCATCCCGATTTGCTGGAAAGGGACCACAGCGCTACACATCCAGATTTTGGAAATCCAGAACGCAGTGGAAAACTGAAGGTGGTTTCTCAAGTCTTGAAGGTATGGAAGGATCAAGGTCATCGAGTTCTGATTTTTTCTCAG
ACACAGCAAATGCTGGATATCATTGAAAACTACCTAGTGTCTGAAGGCCTAACTTATAGGCGAATGGATGGGTTAACTCCTGTCAAACAACGTACAGACTTAATGGATGAATTCAACGAGTCTACACATGTTTTTGTCTTTATTTTAACTACGAAGGTTGGGGGTCTAGGAACAAACTTGATTGGGGCAGACAGGGTAAT
AATTTTCGATCCAGATTGGAATCCTTCGACTGATATGCAGGCAAGGGAGCGTGCTTGGCGTATAGGTCAGACCCGAGATGTGACTATTTACAGATTGATTACCCGTGGAACAATTGAGGAGAAAGTTTACCATAGACAGATATACAAGCATTTCCTGACCAACAAGATCCTCAAGAACCCTCGACAGCGGAGGTTCTTTA
AATCAAGAGACATGCGGGATCTTTTCACTTTACAAGATGACCTGGGTCAGGATAAGACAGAGACATCTAGCATTTTCAGTGAATTGGCTGGAGAAATAAAGTTAGGTGATCAGAACGAACAACTCATACAATCAATGTCTTCTGTTGCTGTACAAAGTGAGAATACTTCAACTCGTGGCAAGCGTAATGGGGGCCGAGGC
AAAAATATATCTAGAAGTAAAGGGAAAGAAAAGGTTGAGCCTAAAGAAGAGGCCTCAAATAAGGATGATTCTGATATGTTAAAAAACCTGTTGGCTAATGGAATTCATAGTGCTATGGATCACGATGCTATTCTTGACATCAATGATGAAGAGAAGATGAAGCTCGATGATGAAGCTTCTCTAGTTGCACAAAGAGCAGC
TGAAGCTTTAAGACAATCACGGATGCTCAGACGTCAAGATAGCATATCAATCCCGACATGGACAGGAAGGTCTGGTGCGGCTGGAGCTCCAGCAGATGTAAGGAGGAGATTTGGATCAAAAATAAATTCCCAAGTGGTTTCTGGTTTAAGTTCTACTGAATGTTCCCGGATCAGTGGAGCAGGTACATCCCAGGGTTCTT
CAACAGGCCTTGCTGGAGCCTCCTTGGGGAAGGCCTTGAGTTCTGGTGATCTTCTTGCACGGATACGGGGTAATCGAGAAAGTGCTATAGTTGCAGGGATAGAGTGCCAGAGAGTATCTGGAGCAGCAGCCCCTAGCCTGGTGAATGGATCTGAAAGGACACCAGGAAGCAACAGGCCTACTACCAGTCGCATTCCTCCA
GTATCTATTCAGCCTGAGATTCTAATTCGTCAGATGTGTACATTCATACAGCAGACTGGTGGAAGTGCACGGTCAGCAAATATTGTTGAGCATTTTAAAGACATAGTTCCATCAAAAGATATGGCTTTGTTCAAGAAACTTTTGAAAGAAATTGCTGTGTTGAGAAAAGAAGGTGGCGAAGGTGAGTGGGTATTAAAACC
AGACTACCAGATCGACAAATTTGATGCTGGTTGATATTGTAATTTTTTCAGGAGTTCTTGCAGTTACAGCTTTTAGTGGTATGTCCTATTTTGTGACCTTTCAGTCTCATATATTAGTACTGCTGCCACATTGAGAGCTTTTGTTCTCCGACAAGGTCCTTTTCTGTTCTCATAACCTGTAAAATGTTGTGCAATAAGAA
CAAATTTGGAATCCATTCCACTTGACTTGTATAGGGGACAAGTTTGACATCCGGGTTTACGTCTCTAATTACCATCTGACATAGGTGAGCGGGTCTATTTTTGAATACTTCCACAACTCTTTTGATAAATCTGGTCTGGAAGTACTCTTTGTAATTGAATTTGTAATTAATTTTGAGAAATTATTACTGGAGGCCACAAC
TGCTGGTTGAATTTTTTAGATGTACATGAGCC