sp|Q9FL41|WTR38_ARATH ----> WAT1-related protein At5g07050
Intron 1 GTGTAGTCAT ... CTTTTGCAAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 33.03 | 11 | 3.9 | 7 |
| A2 | 54.84 | 7 | 10 | 7 |
| A3 | 50 | 3 | 3 | 3 |
| A4 | -1 | 0 | 0 | 0 |
| A5 | 60 | 2 | 2 | 4 |
| A6 | 45.68 | 40 | 31.3 | 36 |
| A7 | 50.62 | 37 | 39.9 | 36 |
| A8 | 47.37 | 58 | 43.4 | 61 |
| A9 | 52.06 | 34 | 35.9 | 38 |
| A10 | 56.5 | 16 | 22.6 | 19 |
>TRINITY_DN38114_c0_g1_i6 from sample A6 / Example spliced isoformCTAGCTATGGCTCCTTGGCCCACTGACAACGATAACACTTGGCAGCAGTACCAAGCTTTCTCCAACGACAGTTCACCATTTCTCTAGTTGTTTTCAGCTGCAACAGTTTTACTGTGTTCGACACCACCAGGAACCTTGTGTTTAGAGTAGATCAAGTTGTTCTCATGGACGCTGCAGGGATGGCTCTCCTCACAATGTGA
CGCAAGAGGTTGTGTCTGCAACATGAATGGATGGCAAGGATTCTTGGGAGAATCCCGGGACACCCAAAAACCATTGTTTTTCATGAGAAGGACACCCTCTCTATTGATTCATACAAAGAATTTAGCAGCGGTTTACGTGTGTTTGTCGGCTAAAAGAAACAAGAAGAAGGCGCACTCTGACTACCGCGTTGAAGGATGTT
ATGCCAAGCATTCCTTCACCCTTCTCAACAACCTCAACGAACTCATTGTTGCAGAGGTGAAGCCAAAGCAAGTAAGATCAGAGATAACGTTGGGAACATATGTGTTTAATCTGACGGAAGACCAAGCCAATTCTCACATTTACTGCTTTCTGTGGTATTTTTGTCAAAGCTTTGATTGGGTCCACTTTGAACCAAAAATT
CTACTCGGCAACTCTGGCTTATACATCACCCACATTTTCATGTGCACTCAGCAACATGGTAGCTGTTGTGATGGCTAATCCTTTCCGACGGGATAGAGGTGGTATAGGAAGTCTGGGTGCTAAGGCAAATTCACTAGGAACCATCATCTGCTTTGGTGGGACTAGCTCGTGACATTATGCAGAGAAATAAAATTAAAGGA
AAAGCGCCTGTCTCTTTTGGGCTTAGGTTGCGGAGCTCTAGGAAAATTAGACTTGCCCGCTGACTATGAGTATTGCAGTTGCATCTAGCGCTGTTCTTGCTGCTGATGGGGATGTCCAGGTAGGGGCCTCAGCTTCCATCGAATTGCCAAACCATAGATTGATGTGGACTCTATCTTCGATGTTATCAAATCGAAGAAGG
TTTCAATTGTTGCAATTAATGGAATTTTTTAAAACTGCTTTCAAGTTGGGCGTGTTTGGGAGGAATTTGGGATTGTTTGTTTTTTATTTGTAAATAAGTGCCAGCTGTGGGGTTTTATGGCTATCCAATGGAACCAAATTTGGTCTGCGAGAAATAAAAATGCTAATTTGTTATTAAAATTGAAGATGAAAAAAGAGGGG
TTGCCGAGAAATAAAAAGAACCATTTACGAGAGGAAAGATAAGTAGGACTCCGATAAATGACATACATATTTAGGGGGAGGTCTTGTGTCGTGGTATGAGAGATAGCTTGGTCTCTAAGTAGCCTATTCTCGCTCAACGTAATCCTGCCCAATATATCTTTATTTGCTGGCTGATCAATTGGGTTTGTGGTGAACATAGA
TTAAGATGTAAGGTTGTTAAATATAAATGCGTTATAAGCA
>TRINITY_DN38114_c0_g1_i2 from sample A6 / Example unspliced isoform:CTAGCTATGGCTCCTTGGCCCACTGACAACGATAACACTTGGCAGCAGTACCAAGCTTTCTCCAACGACAGTTCACCATTTCTCTAGTTGTTTTCAGCTGCAACAGTTTTACTGTGTTCGACACCACCAGGAACCTTGTGTTTAGAGTAGATCAAGTTGTTCTCATGGACGCTGCAGGGATGGCTCTCCTCACAATGTGA
CGCAAGAGGTTGTGTCTGCAACATGAATGGATGGCAAGGATTCTTGGGAGAATCCCGGGACACCCAAAAACCATTGTTTTTCATGAGAAGGACACCCTCTCTATTGATTCATACAAAGAATTTAGCAGCGGTTTACGTGTGTTTGTCGGCTAAAAGAAACAAGAAGAAGGCGCACTCTGACTACCGCGTTGAAGGATGTT
ATGCCAAGCATTCCTTCACCCTTCTCAACAACCTCAACGAACTCATTGTTGCAGAGGTGAAGCCAAAGCAAGTAAGATCAGAGATAACGTTGGGAACATATGTGTTTAATCTGACGGAAGACCAAGCCAATTCTCACATTTACTGCTTTCTGTGGTATTTTTGTCAAAGCTTTGATTGGGTCCACTTTGAACCAAAAATT
CTACTCGGCAACTCTGGCTTATACATCACCCACATTTTCATGTGCACTCAGCAACATGGTAGCTGTTGTGATGGCTAATCCTTTCCGACGGGATAGAGGTGGTATAGGAAGTCTGGGTGCTAAGGCAAATTCACTAGGAACCATCATCTGCTTTGGTGGGACTAGCTCGTGACATTATGCAGAGAAATAAAATTAAAGgt
gtagtcatgatcatgtttccctttaaaagaacgcaatgcaagcacaaatctaatgaatccgtctctcaaattttgatgaagggctttgtcgccattcttttgcaagGAAAAGCGCCTGTCTCTTTTGGGCTTAGGTTGCGGAGCTCTAGGAAAATTAGACTTGCCCGCTGACTATGAGTATTGCAGTTGCATCTAGCGCT
GTTCTTGCTGCTGATGGGGATGTCCAGGTAGGGGCCTCAGCTTCCATCGAATTGCCAAACCATAGATTGATGTGGACTCTATCTTCGATGTTATCAAATCGAAGAAGGTTTCAATTGTTGCAATTAATGGAATTTTTTAAAACTGCTTTCAAGTTGGGCGTGTTTGGGAGGAATTTGGGATTGTTTGTTTTTTATTTGTA
AATAAGTGCCAGCTGTGGGGTTTTATGGCTATCCAATGGAACCAAATTTGGTCTGCGAGAAATAAAAATGCTAATTTGTTATTAAAATTGAAGATGAAAAAAGAGGGGTTGCCGAGAAATAAAAAGAACCATTTACGAGAGGAAAGATAAGTAGGACTCCGATAAATGACATACATATTTAGGGGGAGGTCTTGTGTCGT
GGTATGAGAGATAGCTTGGTCTCTAAGTAGCCTATTCTCGCTCAACGTAATCCTGCCCAATATATCTTTATTTGCTGGCTGATCAATTGGGTTTGTGGTGAACATAGATTAAGATGTAAGGTTGTTAAATATAAATGCGTTATAAGCA
Intron 2 GTGTAGTCAT ... TTTGATGAAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 32.85 | 8 | 3.8 | 4 |
| A2 | 77.78 | 2 | 10 | 4 |
| A3 | 50 | 3 | 3 | 3 |
| A4 | -1 | 0 | 0 | 0 |
| A5 | 100 | 0 | 2 | 2 |
| A6 | 49.56 | 25 | 31.2 | 18 |
| A7 | 51.37 | 34 | 39.8 | 32 |
| A8 | 47.18 | 50 | 43.3 | 46 |
| A9 | 55.31 | 27 | 35.8 | 31 |
| A10 | 53.27 | 16 | 22.5 | 14 |
>TRINITY_DN38114_c0_g1_i3 from sample A6 / Example spliced isoformCTAGCTATGGCTCCTTGGCCCACTGACAACGATAACACTTGGCAGCAGTACCAAGCTTTCTCCAACGACAGTTCACCATTTCTCTAGTTGTTTTCAGCTGCAACAGTTTTACTGTGTTCGACACCACCAGGAACCTTGTGTTTAGAGTAGATCAAGTTGTTCTCATGGACGCTGCAGGGATGGCTCTCCTCACAATGTGA
CGCAAGAGGTTGTGTCTGCAACATGAATGGATGGCAAGGATTCTTGGGAGAATCCCGGGACACCCAAAAACCATTGTTTTTCATGAGAAGGACACCCTCTCTATTGATTCATACAAAGAATTTAGCAGCGGTTTACGTGTGTTTGTCGGCTAAAAGAAACAAGAAGAAGGCGCACTCTGACTACCGCGTTGAAGGATGTT
ATGCCAAGCATTCCTTCACCCTTCTCAACAACCTCAACGAACTCATTGTTGCAGAGGTGAAGCCAAAGCAAGTAAGATCAGAGATAACGTTGGGAACATATGTGTTTAATCTGACGGAAGACCAAGCCAATTCTCACATTTACTGCTTTCTGTGGTATTTTTGTCAAAGCTTTGATTGGGTCCACTTTGAACCAAAAATT
CTACTCGGCAACTCTGGCTTATACATCACCCACATTTTCATGTGCACTCAGCAACATGGTAGCTGTTGTGATGGCTAATCCTTTCCGACGGGATAGAGGTGGTATAGGAAGTCTGGGTGCTAAGGCAAATTCACTAGGAACCATCATCTGCTTTGGTGGGACTAGCTCGTGACATTATGCAGAGAAATAAAATTAAAGGG
CTTTGTCGCCATTCTTTTGCAAGGAAAAGCGCCTGTCTCTTTTGGGCTTAGGTTGCGGAGCTCTAGGAAAATTAGACTTGCCCGCTGACTATGAGTATTGCAGTTGCATCTAGCGCTGTTCTTGCTGCTGATGGGGATGTCCAGGTAGGGGCCTCAGCTTCCATCGAATTGCCAAACCATAGATTGATGTGGACTCTATC
TTCGATGTTATCAAATCGAAGAAGGTTTCAATTGTTGCAATTAATGGAATTTTTTAAAACTGCTTTCAAGTTGGGCGTGTTTGGGAGGAATTTGGGATTGTTTGTTTTTTATTTGTAAATAAGTGCCAGCTGTGGGGTTTTATGGCTATCCAATGGAACCAAATTTGGTCTGCGAGAAATAAAAATGCTAATTTGTTATT
AAAATTGAAGATGAAAAAAGAGGGGTTGCCGAGAAATAAAAAGAACCATTTACGAGAGGAAAGATAAGTAGGACTCCGATAAATGACATACATATTTAGGGGGAGGTCTTGTGTCGTGGTATGAGAGATAGCTTGGTCTCTAAGTAGCCTATTCTCGCTCAACGTAATCCTGCCCAATATATCTTTATTTGCTGGCTGAT
CAATTGGGTTTGTGGTGAACATAGATTAAGATGTAAGGTTGTTAAATATAAATGCGTTATAAGCA
>TRINITY_DN38114_c0_g1_i5 from sample A6 / Example unspliced isoform:CCAACATCAATTCACCATTTCTCTTGTTTTCAGTTGCAACGGTTTTACTGTGTTTGACTCCATAGGGAACCTTGTGTTTAGAGTAGACAATTATCCTTCAGATCCACAGGATGAATTTGTTCTCATGGACGTTGTAGGAATGGCTCTCCTCACAATGGGACGTAAGGATGTTATGGCAAGCGTTCCTTCACCCCTCTCAA
CAGCCTTAACGAAGTCATTGCAAAGGTGAATCCAAAGAAAGCGAGATGAGAGATAACGGTGAGCCTTGGCTATGACCAAGATTTTGTTATGGGGTTGATTATCGTTCTGGATCAGAGCATGTCATCGTAGCTTATTCGCACATCGATTACAGGGAGCACCGGAAAAAGAGAGGAGGTAATTTGTTTTATTGTTTCTTGCT
CTTGGCCTTGAAGAAGCCTTGGCACCCTAGGTATCTTAGAGGATTTTATCTGCTTCACTTCATTCATGCATTGTTATAGTTTGGAATGTTTAACGGCAATGGAAATTCCTGGTTAGGGTTCTACCCGTTCTTCATATTTTCTTTTCTCATTTGTTGTAGGAAGACCAAGCCAATTCTCACATTTACTGCTTTCTGTGGTA
TTTTTGTCAAAGCTTTGATTGGGTCCACTTTGAACCAAAAATTCTACTCGGCAACTCTGGCTTATACATCACCCACATTTTCATGTGCACTCAGCAACATGGTAGCTGTTGTGATGGCTAATCCTTTCCGGTAATTGTCTAAAGATCCAGATCCAGTACATTATTCCAAACAAGTTTATATGCCATTACTTTATCTGAGT
GCCTATTTTATTTGTTGAAAGCAAAATTTCTGAACTTGTTACAGACGGGATAGAGGTGGTATAGGAAGTCTGGGTGCTAAGGCAAATTCACTAGGAACCATCATCTGCTTTGGTGGGACTAGCTCGTGACATTATGCAGAGAAATAAAATTAAAGgtgtagtcatgatcatgtttccctttaaaagaacgcaatgcaagc
acaaatctaatgaatccgtctctcaaattttgatgaagGGCTTTGTCGCCATTCTTTTGCAAGGAAAAGCGCCTGTCTCTTTTGGGCTTAGGTTGCGGAGCTCTAGGAAAATTAGACTTGCCCGCTGACTATGAGTATTGCAGTTGCATCTAGCGCTGTTCTTGCTGCTGATGGGGATGTCCAGGTAGGGGCCTCAGCTT
CCATCGAATTGCCAAACCATAGATTGATGTGGACTCTATCTTCGATGTTATCAAATCGAAGAAGGTTTCAATTGTTGCAATTAATGGAATTTTTTAAAACTGCTTTCAAGTTGGGCGTGTTTGGGAGGAATTTGGGATTGTTTGTTTTTTATTTGTAAATAAGTGCCAGCTGTGGGGTTTTATGGCTATCCAATGGAACC
AAATTTGGTCTGCGAGAAATAAAAATGCTAATTTGTTATTAAAATTGAAGATGAAAAAAGAGGGGTTGCCGAGAAATAAAAAGAACCATTTACGAGAGGAAAGATAAGTAGGACTCCGATAAATGACATACATATTTAGGGGGAGGTCTTGTGTCGTGGTATGAGAGATAGCTTGGTCTCTAAGTAGCCTATTCTCGCTC
AACGTAATCCTGCCCAATATATCTTTATTTGCTGGCTGATCAATTGGGTTTGTGGTGAACATAGATTAAGATGTAAGGTTGTTAAATATAAATGCGTTATAAGCA
Intron 3 GTAATTGTCT ... CTTGTTACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 14.29 | 3 | 1 | 0 |
| A2 | 12.5 | 7 | 2 | 0 |
| A3 | 21.74 | 9 | 2 | 3 |
| A4 | -1 | 0 | 0 | 0 |
| A5 | -1 | 0 | 0 | 0 |
| A6 | 22.85 | 23.7 | 9 | 5 |
| A7 | 17.65 | 32.7 | 7 | 7 |
| A8 | 24.29 | 48.3 | 22 | 9 |
| A9 | 25.54 | 23.3 | 6 | 10 |
| A10 | 25.13 | 25.3 | 14 | 3 |
>TRINITY_DN38114_c0_g1_i3 from sample A6 / Example spliced isoformCTAGCTATGGCTCCTTGGCCCACTGACAACGATAACACTTGGCAGCAGTACCAAGCTTTCTCCAACGACAGTTCACCATTTCTCTAGTTGTTTTCAGCTGCAACAGTTTTACTGTGTTCGACACCACCAGGAACCTTGTGTTTAGAGTAGATCAAGTTGTTCTCATGGACGCTGCAGGGATGGCTCTCCTCACAATGTGA
CGCAAGAGGTTGTGTCTGCAACATGAATGGATGGCAAGGATTCTTGGGAGAATCCCGGGACACCCAAAAACCATTGTTTTTCATGAGAAGGACACCCTCTCTATTGATTCATACAAAGAATTTAGCAGCGGTTTACGTGTGTTTGTCGGCTAAAAGAAACAAGAAGAAGGCGCACTCTGACTACCGCGTTGAAGGATGTT
ATGCCAAGCATTCCTTCACCCTTCTCAACAACCTCAACGAACTCATTGTTGCAGAGGTGAAGCCAAAGCAAGTAAGATCAGAGATAACGTTGGGAACATATGTGTTTAATCTGACGGAAGACCAAGCCAATTCTCACATTTACTGCTTTCTGTGGTATTTTTGTCAAAGCTTTGATTGGGTCCACTTTGAACCAAAAATT
CTACTCGGCAACTCTGGCTTATACATCACCCACATTTTCATGTGCACTCAGCAACATGGTAGCTGTTGTGATGGCTAATCCTTTCCGACGGGATAGAGGTGGTATAGGAAGTCTGGGTGCTAAGGCAAATTCACTAGGAACCATCATCTGCTTTGGTGGGACTAGCTCGTGACATTATGCAGAGAAATAAAATTAAAGGG
CTTTGTCGCCATTCTTTTGCAAGGAAAAGCGCCTGTCTCTTTTGGGCTTAGGTTGCGGAGCTCTAGGAAAATTAGACTTGCCCGCTGACTATGAGTATTGCAGTTGCATCTAGCGCTGTTCTTGCTGCTGATGGGGATGTCCAGGTAGGGGCCTCAGCTTCCATCGAATTGCCAAACCATAGATTGATGTGGACTCTATC
TTCGATGTTATCAAATCGAAGAAGGTTTCAATTGTTGCAATTAATGGAATTTTTTAAAACTGCTTTCAAGTTGGGCGTGTTTGGGAGGAATTTGGGATTGTTTGTTTTTTATTTGTAAATAAGTGCCAGCTGTGGGGTTTTATGGCTATCCAATGGAACCAAATTTGGTCTGCGAGAAATAAAAATGCTAATTTGTTATT
AAAATTGAAGATGAAAAAAGAGGGGTTGCCGAGAAATAAAAAGAACCATTTACGAGAGGAAAGATAAGTAGGACTCCGATAAATGACATACATATTTAGGGGGAGGTCTTGTGTCGTGGTATGAGAGATAGCTTGGTCTCTAAGTAGCCTATTCTCGCTCAACGTAATCCTGCCCAATATATCTTTATTTGCTGGCTGAT
CAATTGGGTTTGTGGTGAACATAGATTAAGATGTAAGGTTGTTAAATATAAATGCGTTATAAGCA
>TRINITY_DN38114_c0_g1_i5 from sample A6 / Example unspliced isoform:CCAACATCAATTCACCATTTCTCTTGTTTTCAGTTGCAACGGTTTTACTGTGTTTGACTCCATAGGGAACCTTGTGTTTAGAGTAGACAATTATCCTTCAGATCCACAGGATGAATTTGTTCTCATGGACGTTGTAGGAATGGCTCTCCTCACAATGGGACGTAAGGATGTTATGGCAAGCGTTCCTTCACCCCTCTCAA
CAGCCTTAACGAAGTCATTGCAAAGGTGAATCCAAAGAAAGCGAGATGAGAGATAACGGTGAGCCTTGGCTATGACCAAGATTTTGTTATGGGGTTGATTATCGTTCTGGATCAGAGCATGTCATCGTAGCTTATTCGCACATCGATTACAGGGAGCACCGGAAAAAGAGAGGAGGTAATTTGTTTTATTGTTTCTTGCT
CTTGGCCTTGAAGAAGCCTTGGCACCCTAGGTATCTTAGAGGATTTTATCTGCTTCACTTCATTCATGCATTGTTATAGTTTGGAATGTTTAACGGCAATGGAAATTCCTGGTTAGGGTTCTACCCGTTCTTCATATTTTCTTTTCTCATTTGTTGTAGGAAGACCAAGCCAATTCTCACATTTACTGCTTTCTGTGGTA
TTTTTGTCAAAGCTTTGATTGGGTCCACTTTGAACCAAAAATTCTACTCGGCAACTCTGGCTTATACATCACCCACATTTTCATGTGCACTCAGCAACATGGTAGCTGTTGTGATGGCTAATCCTTTCCGgtaattgtctaaagatccagatccagtacattattccaaacaagtttatatgccattactttatctgagt
gcctattttatttgttgaaagcaaaatttctgaacttgttacagACGGGATAGAGGTGGTATAGGAAGTCTGGGTGCTAAGGCAAATTCACTAGGAACCATCATCTGCTTTGGTGGGACTAGCTCGTGACATTATGCAGAGAAATAAAATTAAAGGTGTAGTCATGATCATGTTTCCCTTTAAAAGAACGCAATGCAAGC
ACAAATCTAATGAATCCGTCTCTCAAATTTTGATGAAGGGCTTTGTCGCCATTCTTTTGCAAGGAAAAGCGCCTGTCTCTTTTGGGCTTAGGTTGCGGAGCTCTAGGAAAATTAGACTTGCCCGCTGACTATGAGTATTGCAGTTGCATCTAGCGCTGTTCTTGCTGCTGATGGGGATGTCCAGGTAGGGGCCTCAGCTT
CCATCGAATTGCCAAACCATAGATTGATGTGGACTCTATCTTCGATGTTATCAAATCGAAGAAGGTTTCAATTGTTGCAATTAATGGAATTTTTTAAAACTGCTTTCAAGTTGGGCGTGTTTGGGAGGAATTTGGGATTGTTTGTTTTTTATTTGTAAATAAGTGCCAGCTGTGGGGTTTTATGGCTATCCAATGGAACC
AAATTTGGTCTGCGAGAAATAAAAATGCTAATTTGTTATTAAAATTGAAGATGAAAAAAGAGGGGTTGCCGAGAAATAAAAAGAACCATTTACGAGAGGAAAGATAAGTAGGACTCCGATAAATGACATACATATTTAGGGGGAGGTCTTGTGTCGTGGTATGAGAGATAGCTTGGTCTCTAAGTAGCCTATTCTCGCTC
AACGTAATCCTGCCCAATATATCTTTATTTGCTGGCTGATCAATTGGGTTTGTGGTGAACATAGATTAAGATGTAAGGTTGTTAAATATAAATGCGTTATAAGCA