NA ----> NA
Intron 1 GTACGACACT ... TTTCCTTCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 23.08 | 45 | 10 | 17 |
| A2 | 29.17 | 34 | 19 | 9 |
| A3 | 26.5 | 43 | 19 | 12 |
| A4 | 26.32 | 35 | 10 | 15 |
| A5 | 25.58 | 16 | 3 | 8 |
| A6 | 28.97 | 293 | 130 | 109 |
| A7 | 23.75 | 329 | 110 | 95 |
| A8 | 25.13 | 353 | 128 | 109 |
| A9 | 24.67 | 403 | 129 | 135 |
| A10 | 24.22 | 255 | 79 | 84 |
>TRINITY_DN24569_c0_g1_i1 from sample A6 / Example spliced isoformAAACAGAGGACAAAGGGGAAGAGGAACATTGCCATGCGACGGCAATGCAAATTTTGAACTGGTGATGACATGCAAAATACGAACCAATCCATTCATCCATCCGTAGCTATGGCTTTGCGGGGATTGAGGTTAGGTTTATGGGTAAAATATTTGGCAGGATTGAGACTTGCTCCTTTTGTCCCTACTCCCCACCATGTAGC
CAAGGCCATGCTCCGTCTTGCAGATGTTAAATCCTCCGACTTTGTGGTTGATCTTGGTTGTGGAGATGCTCGCCTTCTCATCTCTGCTGCAAAACATCACGGGGCCAAGGGATACGGAGTGGAAATGGACACTGAGCTGTTTAAAGAAGCTGTGAGAGCCATCGAGAAGGAAGGACTGAGTCATATGATCTCTGTACACC
AAAAAGATGCAATGGACGCAGAATTGCACATGGCATCAGTTGTAACATTATACTTAAGTGATGCAGGCAATGCGAAGATTCTCCCCAAATTACAGCACCAGCTGCCACCGAATGGTAGGGTGGTGTCTTTTTGTTGGCCATTCAAGGGTATTAATCCATTACGCGTTGAAAGAGTGGATGGCATCACTGTGTATCTTTAT
GATTTTAATCGTTTAAACAACAATGCCCATATCTAAGTCTTTTATTCTGTTAAATCTGACATGTAGCTGGTTTTTTTTTAATATTTTTTTTTAAAGTAGGAAAAACTACAATACTCATGTATTTTTTTCTTTCAAAAAAGATCGTTTTTCTTATTTTTGGAAGGCAATAATGGCACATAATTCAATGTTTTTGGATTAAT
AACAGTTATTTTCTTATTTCACTGTACCGAAAATTGTTGTAAGCTGGGCATTATAGGATCCCGTGTTCTTATTCCAGGG
>TRINITY_DN24569_c0_g1_i2 from sample A6 / Example unspliced isoform:AAACAGAGGACAAAGGGGAAGAGGAACATTGCCATGCGACGGCAATGCAAATTTTGAACTGGTGATGACATGCAAAATACGAACCAATCCATTCATCCATCCGTAGCTATGGCTTTGCGGGGATTGAGGTTAGGTTTATGGGTAAAATATTTGGCAGGATTGAGACTTGCTCCTTTTGTCCCTACTCCCCACCATGTAGC
CAAGGCCATGCTCCGTCTTGCAGATGTTAAATCCTCCGACTTTGTGGTTGATCTTGGTTGTGGAGATGCTCGCCTTCTCATCTCTGgtacgacacttggaagactgagatttggtcgattcaaccccaacaatgaacatccgcattgtaattctgtagtgaatgacattattttaattgagttgggttgttgtggttgtt
tttccttcagCTGCAAAACATCACGGGGCCAAGGGATACGGAGTGGAAATGGACACTGAGCTGTTTAAAGAAGCTGTGAGAGCCATCGAGAAGGAAGGACTGAGTCATATGATCTCTGTACACCAAAAAGATGCAATGGACGCAGAATTGCACATGGCATCAGTTGTAACATTATACTTAAGTGATGCAGGCAATGCGAA
GATTCTCCCCAAATTACAGCACCAGCTGCCACCGAATGGTAGGGTGGTGTCTTTTTGTTGGCCATTCAAGGGTATTAATCCATTACGCGTTGAAAGAGTGGATGGCATCACTGTGTATCTTTATGATTTTAATCGTTTAAACAACAATGCCCATATCTAAGTCTTTTATTCTGTTAAATCTGACATGTAGCTGGTTTTTT
TTTAATATTTTTTTTTAAAGTAGGAAAAACTACAATACTCATGTATTTTTTTCTTTCAAAAAAGATCGTTTTTCTTATTTTTGGAAGGCAATAATGGCACATAATTCAATGTTTTTGGATTAATAACAGTTATTTTCTTATTTCACTGTACCGAAAATTGTTGTAAGCTGGGCATTATAGGATCCCGTGTTCTTATTCCA
GGG