NA ----> NA
Intron 1 GTGAGTTCGA ... GGGTTTGAAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 33.33 | 12 | 5 | 6 |
| A2 | 32.9 | 8.2 | 2.5 | 4 |
| A3 | 45.18 | 19 | 0 | 15.7 |
| A4 | 37.5 | 3 | 1.7 | 1.8 |
| A5 | 61.11 | 2 | 5.8 | 3.5 |
| A6 | 35.3 | 44.5 | 14.2 | 24.3 |
| A7 | 37.54 | 28 | 9.7 | 16.8 |
| A8 | 33.67 | 23.7 | 8 | 12 |
| A9 | 34.26 | 38 | 8 | 19.8 |
| A10 | 20.64 | 41 | 9.7 | 10.7 |
>TRINITY_DN95481_c0_g1_i2 from sample A4 / Example spliced isoformCTTGGAACATCACCTCCGAAAAAGCTAAAACAACGTGCATACCGCTGTCACAGTCCAAGATGAGGTATAGAAATCTACACCAACACTGTGCTAATAACACATCCGATGCATGGTTGGACTGCATGGTCCAGCTTCACTTGCATTAAAACTCACAAAGATTGGCCCGCTTAATTCGAGACTTTAAGTCATTTTCATTCTTT
TTTTATTTTGACGCTGCACTCTGTATTCGGCTTTTGGTTTGTTGTAAGCTGCGACTTTTCTTTCATTGGGCAAGTACTTTTATTTATCAATTAATTTGTCGTGCAATTGCTGGGCCACAACAAATTCCTAGTTGGGTTTTCAATCCTGTAAAGTTAGCTGTAGATTTTGACGTGGTGGAGAAAGATATTGATTTTCAAAT
CATTTATGGCGAGGCATCCGTTTTTGTAAGGATTAATTACAGTACCAGGGGATCCATCAGCCCTGTTCTGTTGTTACTGTGGCTAATGTTACCTTCGCATTGAATGAATGGTCTGTAAAAAGTAATGAATAGATTAGGTGGGGTAACAGAGCCTTGTTTAATGGCGGACCGGACTAATATTTAATGCGGTGAAATTAATA
TGGAATGAGGCACCGATGTTTTTTCTATCATTTATGGGCATTGGGTATCCGATCCTCCACCGCAGGAGACCATTATAGTTGATAGATGCGTGCGCCACCAAATCTGAAGTTGCTGAGCCGAAGCCCACCTTCCCGCCTGGTGGTTGGTATTCTTGGCTTGGAGGTTGGGGATTCGAATCCGATTGAGCTTTTTGTGATGC
CCATGGTAGAAAACAGGCGTGGCTCAGAGCATACTGACTAGTTGTGTTTTATCGTCTGGCATTGTGGTGGAGGCGGAGAGAATTGGAAAGATGAGTTATAGCATTGAAATTGTGGAAGATGAGGGTCCCGTCCGTGTTGGTAGCACGGGCACCATCGGATCGCTTCTGTGCCGCGAGCTGGAGTCCATTCGCAGGATGGA
GCAGAAGAAGAAGAAGAGCAGCTGGGCTCCGCGGAACGACGCTGTTTCGATCTCCTGCGGGCGTCCCCTGGCGTCCCTGGCGGGTTGCAGGCTCGGCACACGGAAGGGGCAGGATTCGAACTCGAGGCCCAGGTTTTTCGAGGGCTCCATTACGCCTCGTTCGTCCGGCGCCGAGGCGGTGGCCGCGGTGGAGGGGCGGA
GGAGGAGTGCGGGTAAGCCGTGGTCGAAGACTCTGTTCGATGCCGGCGATATTGAAGCGTCGAAGATGGTGGGCTACGGGCTGCCGAGATCTGAGGGAAGGCGGGCGGATTGTTCGGGCGGTGGGACGATTCGGCGCCAGTCCGTGTCCCTCGATTGTCCCCGCGGCGCGTCGGCATTAGCGGGGATGTTCGATGAAGAG
CAGAGTCCAGCCATGACGCCTGGGAGAGTGAGGAAGGGCAGAGGTGGAGAGTTTCGAACCCCGATGCTCAGAGCCGGGGGGAAGGCTGGTGATGGCGAAGACGGGGGCGTGAGAAGCGCTAGGGCTAGTGTGGAGAGACGGGGAGCAGGGTGTTCTTTTGTGGAAGTGGTGGATTTGAAGTGTAATGGAGATGATAGGAT
CTGGGGAAGCCCTATTGCCAATCGCCTCAGGAGGCTGAGCTTTTCCAGGCTCTCTGAGTCTGTCAATTGACGTGAATATATAGTTGCTCTGTTTCTTCTTCTTTATGGAATTCAATTTCAATGTGATCATTTACCCTTTTTTCTTCATGACAGAGGAGGTGTTTTGTGATCCACTCAATATGATATTTTTCTAATAATTT
TTATATGTATTAAAAAATCATCCCTGGAATAATGTAGATGGCACCCAAACTATGATCTGTGCTCATTATATCTCGG
>TRINITY_DN95481_c0_g1_i1 from sample A4 / Example unspliced isoform:CTTGGAACATCACCTCCGAAAAAGCTAAAACAACGTGCATACCGCTGTCACAGTCCAAGATGAGGTATAGAAATCTACACCAACACTGTGCTAATAACACATCCGATGCATGGTTGGACTGCATGGTCCAGCTTCACTTGCATTAAAACTCACAAAGATTGGCCCGCTTAATTCGAGACTTTAAGTCATTTTCATTCTTT
TTTTATTTTGACGCTGCACTCTGTATTCGGCTTTTGGTTTGTTGTAAGCTGCGACTTTTCTTTCATTGGGCAAGTACTTTTATTTATCAATTAATTTGTCGTGCAATTGCTGGGCCACAACAAATTCCTAGTTGGGTTTTCAATCCTGTAAAGTTAGCTGTAGATTTTGACGTGGTGGAGAAAGATATTGATTTTCAAAT
CATTTATGGCGAGGCATCCGTTTTTGTAAGGATTAATTACAGTACCAGGGGATCCATCAGCCCTGTTCTGTTGTTACTGTGGCTAATGTTACCTTCGCATTGAATGAATGGTCTGTAAAAAGTAATGAATAGATTAGGTGGGGTAACAGAGCCTTGTTTAATGGCGGACCGGACTAATATTTAATGCGGTGAAATTAATA
TGGAATGAGGCACCGATGTTTTTTCTATCATTTATGGGCATTGGGTATCCGATCCTCCACCGCAGGAGACCATTATAGTTGATAGATGCGTGCGCCACCAAATCTGAAGTTGCTGAGCCGAAGCCCACCTTCCCGCCTGgtgagttcgaagttttcgaattaattaatatgaaggcgttctgtttggtgttactaattga
tatactgaaaggctttgtttgggtttgaagGTGGTTGGTATTCTTGGCTTGGAGGTTGGGGATTCGAATCCGATTGAGCTTTTTGTGATGCCCATGGTAGAAAACAGGCGTGGCTCAGAGCATACTGACTAGTTGTGTTTTATCGTCTGGCATTGTGGTGGAGGCGGAGAGAATTGGAAAGATGAGTTATAGCATTGAAA
TTGTGGAAGATGAGGGTCCCGTCCGTGTTGGTAGCACGGGCACCATCGGATCGCTTCTGTGCCGCGAGCTGGAGTCCATTCGCAGGATGGAGCAGAAGAAGAAGAAGAGCAGCTGGGCTCCGCGGAACGACGCTGTTTCGATCTCCTGCGGGCGTCCCCTGGCGTCCCTGGCGGGTTGCAGGCTCGGCACACGGAAGGGG
CAGGATTCGAACTCGAGGCCCAGGTTTTTCGAGGGCTCCATTACGCCTCGTTCGTCCGGCGCCGAGGCGGTGGCCGCGGTGGAGGGGCGGAGGAGGAGTGCGGGTAAGCCGTGGTCGAAGACTCTGTTCGATGCCGGCGATATTGAAGCGTCGAAGATGGTGGGCTACGGGCTGCCGAGATCTGAGGGAAGGCGGGCGGA
TTGTTCGGGCGGTGGGACGATTCGGCGCCAGTCCGTGTCCCTCGATTGTCCCCGCGGCGCGTCGGCATTAGCGGGGATGTTCGATGAAGAGCAGAGTCCAGCCATGACGCCTGGGAGAGTGAGGAAGGGCAGAGGTGGAGAGTTTCGAACCCCGATGCTCAGAGCCGGGGGGAAGGCTGGTGATGGCGAAGACGGGGGCG
TGAGAAGCGCTAGGGCTAGTGTGGAGAGACGGGGAGCAGGGTGTTCTTTTGTGGAAGTGGTGGATTTGAAGTGTAATGGAGATGATAGGATCTGGGGAAGCCCTATTGCCAATCGCCTCAGGAGGCTGAGCTTTTCCAGGCTCTCTGAGTCTGTCAATTGACGTGAATATATAGTTGCTCTGTTTCTTCTTCTTTATGGA
ATTCAATTTCAATGTGATCATTTACCCTTTTTTCTTCATGACAGAGGAGGTGTTTTGTGATCCACTCAATATGATATTTTTCTAATAATTTTTATATGTATTAAAAAATCATCCCTGGAATAATGTAGATGGCACCCAAACTATGATCTGTGCTCATTATATCTCGG