NA ----> NA
Intron 1 GTAAGTGATG ... TCTTGCACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 37.5 | 35 | 4 | 21 |
| A2 | 29.33 | 53 | 1 | 22 |
| A3 | 33.33 | 42 | 0 | 21 |
| A4 | 36.36 | 35 | 1 | 20 |
| A5 | 37.5 | 20 | 0 | 12 |
| A6 | 31.99 | 710 | 0 | 334 |
| A7 | 30.91 | 608 | 0 | 272 |
| A8 | 28.68 | 562 | 0 | 226 |
| A9 | 31.43 | 938 | 2 | 430 |
| A10 | 33.16 | 760 | 3 | 377 |
>TRINITY_DN43773_c0_g1_i8 from sample A9 / Example spliced isoformGCGGATTACTCTCGATCTCTTAAATTTTTGTTTCATCGTGTGCACTGCTTCTGGAGCTGGCGAATCATCTAAATGCGCAGGAAATAAGCTTTTAGTCATCAAGTGCGGAGGTTAAAATGCCTCCATTCTCAGGAAGATGTAACGATCACGAGAGATACTACTTTTGCGTCATGGTGACCGCTCTAGCTGCTGCATTTGTC
ATGTCGATCTATATATTCCATTTGAGCGGTCGATATGAACATCGTGAACTGTTCGCGCTGTTGGGGTTGATCGGCATTGTTGTGACTGTATTTTTGGGACTGACTTTGCTGCTCGTTTGGTACCTTCGCCCCGTTCCAGCTGCTTCGGCTGCACCTATTCCTGTTTCCGTTGCAGCACCTGCTCAACAGCCAGATACCAC
TGTACCTATTCCTGTTTCCGTTGCAGCAAGAACGTCGGTTAATTCATCGTAAGACTGGGGCAACACATATGTGAATATGAGATGATATGTTTAGCCAACTTACTTTTCAAAAACTATTTTCATGAGTGGAGCGCTCTCTGTTACAATACCCATTGCAGTATTCAACAACTTACTTTTCAAAAACTATTTTCATGGCTCAT
TTTTCTGGTTATTGTATACATGTTAATTCATGGTGAGACAGGGACAACACAATATGTGGATATGAGATATCTGTAGCTGATTACCCATTGCAGTATTGAACATCTTACTTTTGAAAAAATATTGGCAACAGTCATTTTCTGGTCACTGCTCGAATCGTTCTTGCTTTCTGCTTATTTTCTTGTTCTTCGAACGCTCTGTA
AAACTATTTTCTTGTTCTTCGACTCCGTGTATATCTAATGACTCCGTTAAAATGCTGCGAATATAGACAGTGACTCCTTTTTGATAATAATATGTTACAATAGTCTGAGGGTATGTTTATCTTGTATTTCCCAATGGTTTATGCCAACTTAAATTAGAATGATTCTTTAACTAAAC
>TRINITY_DN43773_c0_g1_i2 from sample A9 / Example unspliced isoform:GGCGAATCATCTAAATGCGCAGgtaagtgatgagttatgtgttctccctgccatgacttatattcattttattattgttgtgctgctgcaaacataaaaatgttttattggacggggcagctcatatgaaaagagttcaaaaggaagagaagggtttaatatttgtcccgatagccagcatttgaatatataagatttac
tctgacattcggcagagtttttaatgtcagattatgggttttcttgaacaggaaattaatatcaagatgatgtgttttcttgcacagGAAATAAGCTTTTAGTCATCAAGTGCGGAGGTTAAAATGCCTCCATTCTCAGGAAGATGTAACGATCACGAGAGATACTACTTTTGCGTCATGGTGACCGCTCTAGCTGCTGC
ATTTGTCATGTCGATCTATATATTCCATTTGAGCGGTCGATATGAACATCGTGAACTGTTCGCGCTGTTGGGGTTGATCGGCATTGTTGTGACTGTATTTTTGGGACTGACTTTGCTGCTCGTTTGGTACCTTCGCCCCGTTCCAGCTGCTTCGGCTGCACCTATTCCTGTTTCCGTTGCAGCACCTGCTCAACAGCCAG
ATACCACTGTACCTATTCCTGTTTCCGTTGCAGCAAGAACGTCGGTTAATTCATCGTAAGACTGGGGCAACACATATGTGAATATGAGATGATATGTTTAGCCAACTTACTTTTCAAAAACTATTTTCATGAGTGGAGCGCTCTCTGTTACAATACCCATTGCAGTATTCAACAACTTACTTTTCAAAAACTATTTTCAT
GGCTCATTTTTCTGGTTATTGTATACATGTTAATTCATGGTGAGACAGGGACAACACAATATGTGGATATGAGATATCTGTAGCTGATTACCCATTGCAGTATTGAACATCTTACTTTTGAAAAAATATTGGCAACAGTCATTTTCTGGTCACTGCTCGAATCGTTCTTGCTTTCTGCTTATTTTCTTGTTCTTCGAACG
CTCTGTAAAACTATTTTCTTGTTCTTCGACTCCGTGTATATCTAATGACTCCGTTAAAATGCTGCGAATATAGACAGTGACTCCTTTTTGATAATAATATGTTACAATAGTCTGAGGGTATGTTTATCTTGTATTTCCCAATGGTTTATGCCAACTTAAATTAGAATGATTCTTTAACTAAAC