sp|Q41000|ATP4_PEA ----> ATP synthase subunit delta', mitochondrial
Intron 1 GTCAATTCTC ... AATTATGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 50.29 | 59.8 | 60.4 | 4 |
| A2 | 52.51 | 54.2 | 59.8 | 3 |
| A3 | 49.53 | 85 | 83.4 | 4 |
| A4 | 49.63 | 39.2 | 38.6 | 4 |
| A5 | 51.91 | 44.4 | 47.8 | 7 |
| A6 | 51.32 | 414.8 | 436.8 | 43 |
| A7 | 50.77 | 403.6 | 415.8 | 25 |
| A8 | 51.59 | 222.2 | 236.6 | 33 |
| A9 | 51.48 | 425 | 450.6 | 35 |
| A10 | 51.21 | 355.2 | 372 | 18 |
>TRINITY_DN43999_c0_g3_i3 from sample A6 / Example spliced isoformAAACATTTTTCCCTTTTTTAAACTAACGATAATAGGGAAACGACGGAAACAAATGCCCACTAACTCCCATCCGAAGCAGAAGAGAGACAGGTCAAAATTAATACAGAAGGGTTTCAAGGGTTTTGATGCTCTGTGGGGTTTGATACAGAAGGGTTTGTAAGCCATCGTCACCATGTTGGGCCGTCGAGCGTTGTGTTCTC
TGCTGAGATCATCGGCCTCCTCTGTAAGAGTAGGAGGAAGCGGAGTAGTAGCGGGCAGACGAGGATTTGCAGACAATGCCCCGGCTACTGCTACTGATGTCGCCGAGCAAGACTTCATAGCGGCCTGGAAGAAGGTGGCGCCCAACTCGGAGCCTCCGAAGACCCCATTGACATTCATGGAGTCGTGCCCTGCGGTCCTC
GGATCCATTCCCACCAAGCTCACCGTCAACTTCGTCTTGCCCTATCAGGTCGAATTGTCCTCCAAGAAGTGCCTCGGTACAGCCGGAAGGCATTTGTCGAAATTAAGATCTCATCCGAGCTATAAGCACACTGTATACTGAAATTTCTTCTGTCTTCATCATTTTCTATACACACAATGTGTACATTTTTTGCACTGTAA
ATCAGAATTTTTGCATAACAACAACACTTACTCTTCACCTTAAACAATCTTTAGTTTGAAATCGATTTCAGGATCAGAGTTTGTTTTGTGTCCAAGGGCGACACGGGGAGTTGGTGATCTTGATCTGAAGTTTTTGCACCATTTGTGGATCCGGCATTGCACCTTTTGTGGATTCGGCATTGAGAAAAACTCTATTTTCT
AGCCTTTCTACCCTGGTCTGTCCAATACCTTTCCCACTTTCAATATCTTCTATCTGTTGCACTCTACCCTGCTGCAATTCATCAATCCAGGTGTTTTGATGCATTTTTCCGGTAGTTTATGCTCGTCTCTTAGCCGATCGATGATGTCATTGGGTTTCTGACCAGGTTTCTATGCTACAGTTTCCATATAACCTCTGAGA
GAGGTTGATTTCACATTATTTTCTGAATCTCGCTCTAAAAAGTTTGCAGTTTAGCTAAAATTCGACTGCTTCCCATTGTTCTAGAACCTTGAAAAAAATATCTAGACGTTGAAATAGATGATGGAAGAGGAAAAGACACAAAGTGGGTGAAGAAAAAAAGGGGGGAACGAAGAGGTTGCAACACTAAATAGCACTGCTAC
TGAAGAGAAGCAGGAAACCACTAGCAGGGCAAAATGATGCCAGAAAATCAGCATGAGCAGGAGATAGCAAAGACTACTTGAGAAAAAAAAGGAGAGCTCAGGGCATGCTAATTCGAATTGATTGCCTTTATAAAGGAGGGGCCAAAAAAACTGAACCATAGAGTTCTATTACGGATCATGGTTCTTGAAGTCACAGTGAG
GCACGGCCAAAATCTTTTAGATTAATATGATCAATGATTGTATTATTTCCAAATTCCCACTTATAAAAACAAACTCCTGTCGATCAAGTTTAAACATTAAACTTTTAAAATTTAAAGGGATAAACATGAATTCTTTGAAGTTCTCATAAATTTTTGAATGCTAGATTGCTT
>TRINITY_DN43999_c0_g3_i2 from sample A6 / Example unspliced isoform:AAACATTTTTCCCTTTTTTAAACTAACGATAATAGGGAAACGACGGAAACAAATGCCCACTAACTCCCATCCGAAGCAGAAGAGAGACAGGTCAAAATTAATACAGAAGGGTTTCAAGGGTTTTGATGCTCTGTGGGGTTTGATACAGAAGGGTTTGTAAGCCATCGTCACCATGTTGGGCCGTCGAGCGTTGTGTTCTC
TGCTGAGATCATCGGCCTCCTCTGTAAGAGTAGGAGGAAGCGGAGTAGTAGCGGGCAGACGAGGATTTGCAGACAATGCCCCGGCTACTGCTACTGATGTCGCCGAGCAAGACTTCATAGCGGCCTGGAAGAAGGTGGCGCCCAACTCGGAGCCTCCGAAGACCCCATTGACATTCATGGAGTCGTGCCCTGCGGTCCTC
GGATCCATTCCCACCAAGCTCACCGTCAACTTCGTCTTGCCCTATCAGGTCGAATTGTCCTCCAAGAAGgtcaattctcttcttctaaactttcctgtcttttttttaatagaggagatcagcttgttgattgactagaaaaatgtacaaaacatttattaatcaagtacaaattatgcagTGCCTCGGTACAGCCGGAA
GGCATTTGTCGAAATTAAGATCTCATCCGAGCTATAAGCACACTGTATACTGAAATTTCTTCTGTCTTCATCATTTTCTATACACACAATGTGTACATTTTTTGCACTGTAAATCAGAATTTTTGCATAACAACAACACTTACTCTTCACCTTAAACAATCTTTAGTTTGAAATCGATTTCAGGATCAGAGTTTGTTTTG
TGTCCAAGGGCGACACGGGGAGTTGGTGATCTTGATCTGAAGTTTTTGCACCATTTGTGGATCCGGCATTGCACCTTTTGTGGATTCGGCATTGAGAAAAACTCTATTTTCTAGCCTTTCTACCCTGGTCTGTCCAATACCTTTCCCACTTTCAATATCTTCTATCTGTTGCACTCTACCCTGCTGCAATTCATCAATCC
AGGTGTTTTGATGCATTTTTCCGGTAGTTTATGCTCGTCTCTTAGCCGATCGATGATGTCATTGGGTTTCTGACCAGGTTTCTATGCTACAGTTTCCATATAACCTCTGAGAGAGGTTGATTTCACATTATTTTCTGAATCTCGCTCTAAAAAGTTTGCAGTTTAGCTAAAATTCGACTGCTTCCCATTGTTCTAGAACC
TTGAAAAAAATATCTAGACGTTGAAATAGATGATGGAAGAGGAAAAGACACAAAGTGGGTGAAGAAAAAAAGGGGGGAACGAAGAGGTTGCAACACTAAATAGCACTGCTACTGAAGAGAAGCAGGAAACCACTAGCAGGGCAAAATGATGCCAGAAAATCAGCATGAGCAGGAGATAGCAAAGACTACTTGAGAAAAAA
AAGGAGAGCTCAGGGCATGCTAATTCGAATTGATTGCCTTTATAAAGGAGGGGCCAAAAAAACTGAACCATAGAGTTCTATTACGGATCATGGTTCTTGAAGTCACAGTGAGGCACGGCCAAAATCTTTTAGATTAATATGATCAATGATTGTATTATTTCCAAATTCCCACTTATAAAAACAAACTCCTGTCGATCAAG
TTTAAACATTAAACTTTTAAAATTTAAAGGGATAAACATGAATTCTTTGAAGTTCTCATAAATTTTTGAATGCTAGATTGCTT
Intron 2 GTCAATTCTC ... TCGATTTCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 53.41 | 52.6 | 60.4 | 2 |
| A2 | 53.67 | 51.8 | 59.8 | 5 |
| A3 | 50.8 | 80.8 | 83.4 | 1 |
| A4 | 49.5 | 39.4 | 38.6 | 2 |
| A5 | 55.04 | 39.2 | 47.8 | 1 |
| A6 | 52.71 | 392 | 436.8 | 4 |
| A7 | 50.87 | 402.2 | 415.8 | 8.8 |
| A8 | 51.96 | 218.8 | 236.6 | 6 |
| A9 | 52.09 | 414.8 | 450.6 | 1 |
| A10 | 51.68 | 348.8 | 372 | 10 |
>TRINITY_DN43999_c0_g3_i1 from sample A6 / Example spliced isoformAAACATTTTTCCCTTTTTTAAACTAACGATAATAGGGAAACGACGGAAACAAATGCCCACTAACTCCCATCCGAAGCAGAAGAGAGACAGGTCAAAATTAATACAGAAGGGTTTCAAGGGTTTTGATGCTCTGTGGGGTTTGATACAGAAGGGTTTGTAAGCCATCGTCACCATGTTGGGCCGTCGAGCGTTGTGTTCTC
TGCTGAGATCATCGGCCTCCTCTGTAAGAGTAGGAGGAAGCGGAGTAGTAGCGGGCAGACGAGGATTTGCAGACAATGCCCCGGCTACTGCTACTGATGTCGCCGAGCAAGACTTCATAGCGGCCTGGAAGAAGGTGGCGCCCAACTCGGAGCCTCCGAAGACCCCATTGACATTCATGGAGTCGTGCCCTGCGGTCCTC
GGATCCATTCCCACCAAGCTCACCGTCAACTTCGTCTTGCCCTATCAGGTCGAATTGTCCTCCAAGAAGGATCAGAGTTTGTTTTGTGTCCAAGGGCGACACGGGGAGTTGGTGATCTTGATCTGAAGTTTTTGCACCATTTGTGGATCCGGCATTGCACCTTTTGTGGATTCGGCATTGAGAAAAACTCTATTTTCTAG
CCTTTCTACCCTGGTCTGTCCAATACCTTTCCCACTTTCAATATCTTCTATCTGTTGCACTCTACCCTGCTGCAATTCATCAATCCAGGTGTTTTGATGCATTTTTCCGGTAGTTTATGCTCGTCTCTTAGCCGATCGATGATGTCATTGGGTTTCTGACCAGGTTTCTATGCTACAGTTTCCATATAACCTCTGAGAGA
GGTTGATTTCACATTATTTTCTGAATCTCGCTCTAAAAAGTTTGCAGTTTAGCTAAAATTCGACTGCTTCCCATTGTTCTAGAACCTTGAAAAAAATATCTAGACGTTGAAATAGATGATGGAAGAGGAAAAGACACAAAGTGGGTGAAGAAAAAAAGGGGGGAACGAAGAGGTTGCAACACTAAATAGCACTGCTACTG
AAGAGAAGCAGGAAACCACTAGCAGGGCAAAATGATGCCAGAAAATCAGCATGAGCAGGAGATAGCAAAGACTACTTGAGAAAAAAAAGGAGAGCTCAGGGCATGCTAATTCGAATTGATTGCCTTTATAAAGGAGGGGCCAAAAAAACTGAACCATAGAGTTCTATTACGGATCATGGTTCTTGAAGTCACAGTGAGGC
ACGGCCAAAATCTTTTAGATTAATATGATCAATGATTGTATTATTTCCAAATTCCCACTTATAAAAACAAACTCCTGTCGATCAAGTTTAAACATTAAACTTTTAAAATTTAAAGGGATAAACATGAATTCTTTGAAGTTCTCATAAATTTTTGAATGCTAGATTGCTT
>TRINITY_DN43999_c0_g3_i2 from sample A6 / Example unspliced isoform:AAACATTTTTCCCTTTTTTAAACTAACGATAATAGGGAAACGACGGAAACAAATGCCCACTAACTCCCATCCGAAGCAGAAGAGAGACAGGTCAAAATTAATACAGAAGGGTTTCAAGGGTTTTGATGCTCTGTGGGGTTTGATACAGAAGGGTTTGTAAGCCATCGTCACCATGTTGGGCCGTCGAGCGTTGTGTTCTC
TGCTGAGATCATCGGCCTCCTCTGTAAGAGTAGGAGGAAGCGGAGTAGTAGCGGGCAGACGAGGATTTGCAGACAATGCCCCGGCTACTGCTACTGATGTCGCCGAGCAAGACTTCATAGCGGCCTGGAAGAAGGTGGCGCCCAACTCGGAGCCTCCGAAGACCCCATTGACATTCATGGAGTCGTGCCCTGCGGTCCTC
GGATCCATTCCCACCAAGCTCACCGTCAACTTCGTCTTGCCCTATCAGGTCGAATTGTCCTCCAAGAAGgtcaattctcttcttctaaactttcctgtcttttttttaatagaggagatcagcttgttgattgactagaaaaatgtacaaaacatttattaatcaagtacaaattatgcagtgcctcggtacagccggaa
ggcatttgtcgaaattaagatctcatccgagctataagcacactgtatactgaaatttcttctgtcttcatcattttctatacacacaatgtgtacattttttgcactgtaaatcagaatttttgcataacaacaacacttactcttcaccttaaacaatctttagtttgaaatcgatttcagGATCAGAGTTTGTTTTG
TGTCCAAGGGCGACACGGGGAGTTGGTGATCTTGATCTGAAGTTTTTGCACCATTTGTGGATCCGGCATTGCACCTTTTGTGGATTCGGCATTGAGAAAAACTCTATTTTCTAGCCTTTCTACCCTGGTCTGTCCAATACCTTTCCCACTTTCAATATCTTCTATCTGTTGCACTCTACCCTGCTGCAATTCATCAATCC
AGGTGTTTTGATGCATTTTTCCGGTAGTTTATGCTCGTCTCTTAGCCGATCGATGATGTCATTGGGTTTCTGACCAGGTTTCTATGCTACAGTTTCCATATAACCTCTGAGAGAGGTTGATTTCACATTATTTTCTGAATCTCGCTCTAAAAAGTTTGCAGTTTAGCTAAAATTCGACTGCTTCCCATTGTTCTAGAACC
TTGAAAAAAATATCTAGACGTTGAAATAGATGATGGAAGAGGAAAAGACACAAAGTGGGTGAAGAAAAAAAGGGGGGAACGAAGAGGTTGCAACACTAAATAGCACTGCTACTGAAGAGAAGCAGGAAACCACTAGCAGGGCAAAATGATGCCAGAAAATCAGCATGAGCAGGAGATAGCAAAGACTACTTGAGAAAAAA
AAGGAGAGCTCAGGGCATGCTAATTCGAATTGATTGCCTTTATAAAGGAGGGGCCAAAAAAACTGAACCATAGAGTTCTATTACGGATCATGGTTCTTGAAGTCACAGTGAGGCACGGCCAAAATCTTTTAGATTAATATGATCAATGATTGTATTATTTCCAAATTCCCACTTATAAAAACAAACTCCTGTCGATCAAG
TTTAAACATTAAACTTTTAAAATTTAAAGGGATAAACATGAATTCTTTGAAGTTCTCATAAATTTTTGAATGCTAGATTGCTT