sp|A2YNP2|TI10B_ORYSI ----> Protein TIFY 10b
Intron 1 GTAATTAAAT ... GTCGGTGTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 16.19 | 30 | 5 | 0 |
| A2 | 38.05 | 11.5 | 6 | 1 |
| A3 | 30.05 | 20 | 7 | 2 |
| A4 | 15.34 | 17 | 3 | 1 |
| A5 | 36.66 | 3.5 | 2 | 0 |
| A6 | 12.2 | 177 | 22 | 2 |
| A7 | 19.5 | 192 | 42 | 0 |
| A8 | 18.71 | 253 | 54 | 0 |
| A9 | 17.75 | 263 | 54 | 3 |
| A10 | 18.74 | 156.5 | 34 | 5 |
>TRINITY_DN110255_c0_g2_i5 from sample A3 / Example spliced isoformATCTGGATATGCACATTCGAGGAATTTAGGAAACGTGAAACAAAGAATGTCAAAGATTCCAGCGCGTCTCTAAAATGAAAAATAAACTGGGAACTGGATGTCAAGAAATTGTATTTTATTCAACGAAACGGATTTTACACAGCCAGCTGTTGATTCTTTCCGTCTTTCTTGATCATAGCCTAAACCTTACACTGCCTATT
CCAGTCTTCGCAGAATCGCATCCTTTATATCTTCAGCCTCCAGGGAGCCTTGAACTTGCTTGCTGATAAGATTTTCAGTTCCTTCATAAAAGCTGCTTCCAATATTAACCGATCTCGAGATCTTTGATACAAGACACGAACCACGCAGCTATGGCTTCTCAGGGCGTCGATTTGAAGGGTTCCACTATTAGCCGAACCCC
GAAATCTGAACCTGTGAATCAGCTCAACAGCGACAAAGAGCGAGCTTGCCTGCATAATCAGTCATGGATAAAATCCCAAACCTTGCGGCAAGTGCTCTCGTCTACAGATAGTGCAAGAGACGAGTCTTGCGGCCTGTATCAAGGGCCTCAGATGCTGTTAAATTCATCCGCTCCAGGGTTAATGGAACTATTTCCTCAAC
CAACAGTATTTGGAGATTCCATTTCTGCTGCAGCAAAGCAGAAGAGCCCGTCTTTTAAAAGTACTCAAGAGACCGCAGCAATGACTAGTGTGCAGTCACAACGATGGCCATTCCTCTCCCACGGATCTGTCCAGACAAATGCTACAATTTCCAGGCCGGCGTCTGCAACGGCAACAGCAGGCAAGCCAACGATTGCCCCG
TTAACGATCTTCTATAACGGCATGGTCAGCGTTTATGATGTCCCTGCCCAGAAGGCTGAAGAGATCATGATGTTCGCCACTACTGCAATTTCTAATCGTAAGGCCAGTTCTTCTCCTACGACTACCTGCGGGCCTTCACGCACTAAATTCATGTCCATGGCAGTACCAGCAGAGCAATCCGAGGCCACATCCGCGCAGCA
ACAACCGACTCGCAAATTGATAACCGGAATGCCGGTTGCCAAGAAACAATCACTGCAACGTTTTCTTGAGAAACGAAAAGAGAGGTACTCTCTGGTTTCTCTGGAACCATGTGCATTTATGAGACAAAGATTGAATAAACCACTATTTATAGCC
>TRINITY_DN110255_c0_g2_i1 from sample A3 / Example unspliced isoform:ATCTGGATATGCACATTCGAGGAATTTAGGAAACGTGAAACAAAGAATGTCAAAGATTCCAGCGCGTCTCTAAAATGAAAAATAAACTGGGAACTGGATGTCAAGAAATTGTATTTTATTCAACGAAACGGATTTTACACAGCCAGCTGTTGATTCTTTCCGTCTTTCTTGATCATAGCCTAAACCTTACACTGCCTATT
CCAGTCTTCGCAGAATCGCATCCTTTATATCTTCAGCCTCCAGGGAGCCTTGAACTTGCTTGCTGATAAGATTTTCAGTTCCTTCATAAAAGCTGCTTCCAATATTAACCGATCTCGAGATCTTTGATACAAGACACGAACCACGCAGCTATGGCTTCTCAGGGCGTCGATTTGAAGGGTTCCACTATTAGCCGAACCCC
GAAATCTGAACCTGTGAATCAGCTCAACAGCGACAAAGAGCGAGCTTGCCTGCATAATCAGTCATGGATAAAATCCCAAACCTTGCGGCAAGTGCTCTCGTCTACAGATAGTGCAAGAGACGAGTCTTGCGGCCTGTATCAAGGGCCTCAGATGCTGTTAAATTCATCCGCTCCAGGGTTAATGGAACTATTTCCTCAAC
CAACAGTATTTGGAGATTCCATTTCTGCTGCAGCAAAGCAGAAGAGCCCGTCTTTTAAAAGTACTCAAGAGACCGCAGCAATGACTAGTGTGCAGTCACAACGATGGCCATTCCTCTCCCACGGATCTGTCCAGACAAATGCTACAATTTCCAGGCCGGCGTCTGCAACGGCAACAGCAGGCAAGCCAACGATTGCCCCG
TTAACGATCTTCTATAACGGCATGGTCAGCGTTTATGATGTCCCTGCCCAGAAGGCTGAAGAGATCATGATGTTCGCCACTACTGCAATTTCTAATCGTAAGGCCAGTTCTTCTCCTACGACTACCTGCGGGCCTTCACGCACTAAATTCATGTCCATGGCAGTACCAGCAGAGCAATCCGAGGCCACATCCGCGCAGCA
ACAACCGACTCGCAAATTGATAACCGgtaattaaatcgctcgatacacgacctttgttctccttcaaaagcacagttctgctcgcttcagtcgattttttactttcactaaatggagaagtatcattctatgttgtcggtgtagGAATGCCGGTTGCCAGGAAA
Intron 2 GTAAAGATTC ... ATGTATGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 71.7 | 5.9 | 20.8 | 9.2 |
| A2 | 71.02 | 5 | 19 | 5.5 |
| A3 | 53.51 | 19.8 | 29.7 | 16.1 |
| A4 | 79.23 | 4 | 17 | 13.5 |
| A5 | 52.99 | 9 | 10 | 10.6 |
| A6 | 66.37 | 162.1 | 369.2 | 271.5 |
| A7 | 65.12 | 140.8 | 290.2 | 236.3 |
| A8 | 72.49 | 185.8 | 541.2 | 439.4 |
| A9 | 66.97 | 189.9 | 427.7 | 343.8 |
| A10 | 62.02 | 107.9 | 211.3 | 141.6 |
>TRINITY_DN110255_c0_g2_i3 from sample A3 / Example spliced isoformATCTGGATATGCACATTCGAGGAATTTAGGAAACGTGAAACAAAGAATGTCAAAGATTCCAGCGCGTCTCTAAAATGAAAAATAAACTGGGAACTGGATGTCAAGAAATTGTATTTTATTCAACGAAACGGATTTTACACAGCCAGCTGTTGATTCTTTCCGTCTTTCTTGATCATAGCCTAAACCTTACACTGCCTATT
CCAGTCTTCGCAGAATCGCATCCTTTATATCTTCAGCCTCCAGGGAGCCTTGAACTTGCTTGCTGATAAGATTTTCAGTTCCTTCATAAAAGCTGCTTCCAATATTAACCGATCTCGAGATCTTTGATACAAGACACGAACCACGCAGCTATGGCTTCTCAGGGCGTCGATTTGAAGGGTTCCACTATTAGCCGAACCCC
GAAATCTGAACCTGTGAATCAGCTCAACAGCGACAAAGAGCGAGCTTGCCTGCATAATCAGTCATGGATAAAATCCCAAACCTTGCGGCAAGTGCTCTCGTCTACAGATAGTGCAAGAGACGAGTCTTGCGGCCTGTATCAAGGGCCTCAGATGCTGTTAAATTCATCCGCTCCAGGGTTAATGGAACTATTTCCTCAAC
CAACAGTATTTGGAGATTCCATTTCTGCTGCAGCAAAGCAGAAGAGCCCGTCTTTTAAAAGTACTCAAGAGACCGCAGCAATGACTAGTGTGCAGTCACAACGATGGCCATTCCTCTCCCACGGATCTGTCCAGACAAATGCTACGATTTCCAGGCCGGCATCTGCAACGGCCGCAACAGCAGGCAAGCCAACGATTGCC
CCGTTAACGATCTTCTATAACGGCATGGTCAGCGTTTATGATGTCCCTGCCCAGAAGGCTGAAGAGATTATGATGTTTGCCACCACTGCAATTTCTAATGGTAAGGCCAGTTCCTCTCCTACGACTACTTGCGGGCCTTCACGCAGTAAGTTCATGTCCATGGCAATACCAGCAGAGAACTTCGAGGCGACATCTGCGAA
GCAACAACCGACTCGCAAATTGATAACCGGAATGCCGGTTGCCAGGAAACAATCACTACAACGTTTTCTTGAGAAGCGAAAAGAGAGGCTGAACAGCACTACACCTTACATGATAAAACCGACCTCGTGGAAAACGCCTGCATGTAATGAGGGACTCGGCAGTGTTTCCCTTGCTTCTCCGATGGTGTAAATTCACTAAC
CATTGAGCCACCACTGGTTGGCATCCCCTCGGAACAGCTAATCGTTTGGACACTTTTATTTTACAAGAAGAAGCTGCAGTTAGATATGTTAATAGAAGCAAATGAATTCAACAATTTGACTTCATATCCACAGAATTTGAATTGACTTTGTTTGTGAATTATAAGAAATAGACTTGAACAATCCTAGGCCTTCAATAAGG
ATGGATAGTCATCAATGTGTTCTAATTTCCATTTCCTTGCGAGTTGCATTGCATGATAACATGTCCCGACTCCCGCTTGATAATATCTCATTCATATCATAGTTTTATTTGTGCATAGCATGTTATTCACTTTAGTTTGAGTCCTGTTAGGCTCCAAATTCTTACTTTTAAATACGTAGTTACATAGGAGGATAACATAT
CCAGCTTGGTAACATCTCATTCATTCATATTATAGTTGTATCTATGTGTATGGC
>TRINITY_DN110255_c0_g2_i2 from sample A3 / Example unspliced isoform:ATCTGGATATGCACATTCGAGGAATTTAGGAAACGTGAAACAAAGAATGTCAAAGATTCCAGCGCGTCTCTAAAATGAAAAATAAACTGGGAACTGGATGTCAAGAAATTGTATTTTATTCAACGAAACGGATTTTACACAGCCAGCTGTTGATTCTTTCCGTCTTTCTTGATCATAGCCTAAACCTTACACTGCCTATT
CCAGTCTTCGCAGAATCGCATCCTTTATATCTTCAGCCTCCAGGGAGCCTTGAACTTGCTTGCTGATAAGATTTTCAGTTCCTTCATAAAAGCTGCTTCCAATATTAACCGATCTCGAGATCTTTGATACAAGACACGAACCACGCAGCTATGGCTTCTCAGGGCGTCGATTTGAAGGGTTCCACTATTAGCCGAACCCC
GAAATCTGAACCTGTGAATCAGCTCAACAGCGACAAAGAGCGAGCTTGCCTGCATAATCAGTCATGGATAAAATCCCAAACCTTGCGGCAAGTGCTCTCGTCTACAGATAGTGCAAGAGACGAGTCTTGCGGCCTGTATCAAGGGCCTCAGATGCTGTTAAATTCATCCGCTCCAGGGTTAATGGAACTATTTCCTCAAC
CAACAGTATTTGGAGATTCCATTTCTGCTGCAGCAAAGCAGAAGAGCCCGTCTTTTAAAAGTACTCAAGAGACCGCAGCAATGACTAGTGTGCAGTCACAACGATGGCCATTCCTCTCCCACGGATCTGTCCAGACAAATGCTACGATTTCCAGGCCGGCATCTGCAACGGCCGCAACAGCAGGCAAGCCAACGATTGCC
CCGTTAACGATCTTCTATAACGGCATGGTCAGCGTTTATGATGTCCCTGCCCAGAAGGCTGAAGAGATTATGATGTTTGCCACCACTGCAATTTCTAATGGTAAGGCCAGTTCCTCTCCTACGACTACTTGCGGGCCTTCACGCAGTAAGTTCATGTCCATGGCAATACCAGCAGAGAACTTCGAGGCGACATCTGCGAA
GCAACAACCGACTCGCAAATTGATAACCGGAATGCCGGTTGCCAGGAAACAATCACTACAACGTTTTCTTGAGAAGCGAAAAGAGAGGCTGAACAGCACTACACCTTACATGATAAAACCGACCTCGTGGAAAACGCCTGCATGTAATGAGGGACTCGGCAGTGTTTCCCTTGCTTCTCCGATGGTGTAAATTCACTAAC
CATTGAGCCACCACTGGTTGGCATCCCCTCGGAACAGCTAATCGgtaaagattctaaactcctcaaatatcacattccattttcacagattgcaagggttctgatccctctaactctgatcacaatctgaaacttatgtatgcagTTTGGACACTTTTATTTTACAAGAAGAAGCTGCAGTTAGATATGTTAATAGAAGC
AAATGAATTCAACAATTTGACTTCATATCCACAGAATTTGAATTGACTTTGTTTGTGAATTATAAGAAATAGACTTGAACAATCCTAGGCCTTCAATAAGGATGGATAGTCATCAATGTGTTCTAATTTCCATTTCCTTGCGAGTTGCATTGCATGATAACATGTCCCGACTCCCGCTTGATAATATCTCATTCATATCA
TAGTTTTATTTGTGCATAGCATGTTATTCACTTTAGTTTGAGTCCTGTTAGGCTCCAAATTCTTACTTTTAAATACGTAGTTACATAGGAGGATAACATATCCAGCTTGGTAACATCTCATTCATTCATATTATAGTTGTATCTATGTGTATGGC
Intron 3 GTACTCTCTG ... GCAACTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 23.66 | 32.3 | 12.7 | 6 |
| A2 | 15.83 | 17.9 | 1.3 | 5 |
| A3 | 17.89 | 31 | 8.3 | 5 |
| A4 | 41.87 | 15.4 | 11.3 | 9 |
| A5 | 55.56 | 0.9 | 2 | 0 |
| A6 | 23.95 | 235.9 | 82.2 | 61 |
| A7 | 21.8 | 214.1 | 69.7 | 46 |
| A8 | 21.88 | 307.7 | 81 | 88.9 |
| A9 | 25.1 | 277.8 | 103.2 | 78.1 |
| A10 | 22.98 | 194 | 75.4 | 39 |
>TRINITY_DN109719_c0_g1_i5 from sample A2 / Example spliced isoformAATGCATCTGGATATGCACATTCGAGGAATTTGGGAAACGTGAAACAAAGAATGTCAAAGATTCCAGCGCGTCTTTAAAATGAAAAATAAACTGGGAACTGGATGTCAAGAAATTGTATTTTATTCAACGAAACGGATTTTACACAGCCAGCTGTTGATTCTTTCCGTCTTTCTTGATCATAGCCTAAGCCTGACACTGC
AGAATCGCATCCTTTATATCTTCAGCCTCCAGGGAGCCTTGAACTTGCTTGCTGATAAGATTTTCAGTTCCTTCATAAAAGCTGCTTCCAATATTAACCGATCTCGAGATCTTTGATACAAGACACGAACCACGCAGCTATGGCTTCTCAGGGCGTCGATTTGAAGGGTTCCACTATTAGCCGAACCCCGAAATCTGAAC
CTGTGAATCAGCTCAACAGCGACAAAGAGCGAGCTTGCCTGCATAATCAGTCATGGATAAAATCCCAAACCTTGCGGCAAGTGCTCTCGTCTACAGATAGTGCAAGAGACGAGTCTTGCGGCCTGTATCAAGGGCCTCAGATGCTGTTAAATTCATCCGCTCCAGGGTTAATGGAACTATTTCCTCAACCAACAGTATTT
GGAGATTCCATTTCTGCTGCAGCAAAGCAGAAGAGCCCGTCTTGTAAAAGTACTCAAGAGACCGCAGCAATGACTAGTGTGCAGTCACAACGATGGCCATTCCTCTCCCACGGATCTGTCCAGACAAATGCTACAATTTCCAGGCCGGCGTCTGCAACGGCAACAGCAGGCAAGCCAACGATTGCCCCGTTAACGATCTT
CTATAACGGCACGGTCAGCGTTTATGATGTCCCTGCCCAGAAGGCTGAAGAGATCATGATGTTCGCCACTACTGCAATTTCTAATCGTAAGGCCAGTTCTTCTCCTACGACTACCTGCGGGCCTTCACGCACTAAATTCATGTCCATGGCAGTACCAGCAGAGCAATCCGAGGCCACATCCGCGCAGCAACAACCGACTC
GCAAATTGATAACCGGTAATTAAATCGCTCGATACACGACCTTTGTTCTCCTTCAAAAGCACAGTTCTGCTCGCTTCAGTCATTTTTTTACTTTCACTAAATGGAGAAGTATCATTCTATGTTGTCGGTGTAGGAATGCCGGTTGCCAAGAAACAATCACTGCAACGTTTTCTTGAGAAACGAAAAGAGAGGCTTAACAG
CACTACAACTTACACGATGAAGCCGACCTCATGGAAAACTCCTGCATGTAACGAGGGACGCGGCACTGTTTCCCCTGCTTCTCCGATGGTGTAAACTCATTAACCATTGAGCCACCACTGGTCGGCATCCCTTCGGAACAGCTAATCGGTAAAGAATCTAGACTCCTCAAATATCACATTCCATTTTCACAGATTGCAAG
GGTTCTGAGCCCTCTAACTGTGATCACAATCTGAATACTTATGTATGCACTTTGGACACTTTTATTTTACAAGAAGCAGGTCATCAGTATTTGATATTTATTTCTCATCTTTCAATAATTGTTACATACTGTTATAGAAAACTAGGAAGAGAATTAAACTGATTCAATGGGC
>TRINITY_DN109719_c0_g1_i4 from sample A2 / Example unspliced isoform:AATGCATCTGGATATGCACATTCGAGGAATTTGGGAAACGTGAAACAAAGAATGTCAAAGATTCCAGCGCGTCTTTAAAATGAAAAATAAACTGGGAACTGGATGTCAAGAAATTGTATTTTATTCAACGAAACGGATTTTACACAGCCAGCTGTTGATTCTTTCCGTCTTTCTTGATCATAGCCTAAGCCTGACACTGC
AGAATCGCATCCTTTATATCTTCAGCCTCCAGGGAGCCTTGAACTTGCTTGCTGATAAGATTTTCAGTTCCTTCATAAAAGCTGCTTCCAATATTAACCGATCTCGAGATCTTTGATACAAGACACGAACCACGCAGCTATGGCTTCTCAGGGCGTCGATTTGAAGGGTTCCACTATTAGCCGAACCCCGAAATCTGAAC
CTGTGAATCAGCTCAACAGCGACAAAGAGCGAGCTTGCCTGCATAATCAGTCATGGATAAAATCCCAAACCTTGCGGCAAGTGCTCTCGTCTACAGATAGTGCAAGAGACGAGTCTTGCGGCCTGTATCAAGGGCCTCAGATGCTGTTAAATTCATCCGCTCCAGGGTTAATGGAACTATTTCCTCAACCAACAGTATTT
GGAGATTCCATTTCTGCTGCAGCAAAGCAGAAGAGCCCGTCTTGTAAAAGTACTCAAGAGACCGCAGCAATGACTAGTGTGCAGTCACAACGATGGCCATTCCTCTCCCACGGATCTGTCCAGACAAATGCTACAATTTCCAGGCCGGCGTCTGCAACGGCAACAGCAGGCAAGCCAACGATTGCCCCGTTAACGATCTT
CTATAACGGCACGGTCAGCGTTTATGATGTCCCTGCCCAGAAGGCTGAAGAGATCATGATGTTCGCCACTACTGCAATTTCTAATCGTAAGGCCAGTTCTTCTCCTACGACTACCTGCGGGCCTTCACGCACTAAATTCATGTCCATGGCAGTACCAGCAGAGCAATCCGAGGCCACATCCGCGCAGCAACAACCGACTC
GCAAATTGATAACCGGTAATTAAATCGCTCGATACACGACCTTTGTTCTCCTTCAAAAGCACAGTTCTGCTCGCTTCAGTCATTTTTTTACTTTCACTAAATGGAGAAGTATCATTCTATGTTGTCGGTGTAGGAATGCCGGTTGCCAAGAAACAATCACTGCAACGTTTTCTTGAGAAACGAAAAGAGAGgtactctct
ggtttctctggaaccatgtgcatttatgagacaaagattgaataaaccactatttatagcctttgtaaagttgatgggatgtggatatttccggcaactgcagGCTTAACAGCACTACAACTTACACGATGAAGCCGACCTCATGGAAAACTCCTGCATGTAACGAGGGACGCGGCACTGTTTCCCCTGCTTCTCCGATG
GTGTAAACTCATTAACCATTGAGCCACCACTGGTCGGCATCCCTTCGGAACAGCTAATCGGTAAAGAATCTAGACTCCTCAAATATCACATTCCATTTTCACAGATTGCAAGGGTTCTGAGCCCTCTAACTGTGATCACAATCTGAATACTTATGTATGCACTTTGGACACTTTTATTTTACAAGAAGCAGGTCATCAGT
ATTTGATATTTATTTCTCATCTTTCAATAATTGTTACATACTGTTATAGAAAACTAGGAAGAGAATTAAACTGATTCAATGGGC
Intron 4 GTACTCTCTG ... GCAACTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 16.67 | 35 | 10 | 4 |
| A2 | 20.07 | 14 | 4 | 3 |
| A3 | 13.46 | 45 | 3 | 11 |
| A4 | 25.49 | 19 | 4 | 9 |
| A5 | 33.33 | 3 | 2 | 1 |
| A6 | 14 | 258 | 17 | 67 |
| A7 | 13.37 | 230 | 23 | 48 |
| A8 | 12.81 | 282.5 | 17 | 66 |
| A9 | 15.55 | 277 | 25 | 77 |
| A10 | 12.05 | 197 | 20 | 34 |
>TRINITY_DN119385_c0_g1_i4 from sample A1 / Example spliced isoformTATTTGTTTAAAGTCTTAAATTAGGTTTTATACATTTTCTCATGATGGCCGAGTATTTTCACCGGCAGGCTGAAGAGATTATGATGTTTGCCACCACTGCAATTTCTAATGGTAAGGCCAGTTCCTCTCCTACGACTACTTGCGGGCCTTCACGCAGTAAGTTCATGTCCATGGCAATACCAGCAGAGAACTTCGAGGCG
ACATCTGCGAAGCAACAACCGACTCGCAAATTGATAACCGGAATGCCGGTTGCCAGGAAACAATCACTACAACGTTTTCTTGAGAAGCGAAAAGAGAGGCTGAACAGCACTACACCTTACATGATAAAACCGACCTCGTGGAAAACGCCTGCATGTAATGAGGGACTCGGCAGTGTTTCCCTTGCTTCTCCGATGGTGTA
AATTCACTAACCATTGAGCCACCACTGGTTGGCATCCCCTCGGAACAGCTAATCGTTTGGACACTTTTATTTTACAAGAAGCAGGTCATCAGTATTTGATATTTATTTCTCATCTTTCAATAATTGTTACATACTGTTATAGAAAACTAGGAAGAGAATTAAACTGATTCAATGGGCTTTTAGAATGGTCTTCATCTTTC
CACGATGACAGCCACCTTTCATCCTTGAGTGTGAGGATTTCCAGTTAGAAAAGAAAAATAGAAAATTACAAAAAAATATAGGATACTGGCTG
>TRINITY_DN119385_c0_g1_i8 from sample A1 / Example unspliced isoform:CATCCCCTCGGAACAGCTAATCGCAGGGAACTTCGAGGCGACATCTGCGAAGCAACAACCGACTCGCAAATTGATAACCGGTAATTAAATCGCTCGATACACGACCTATGTACTTCTCCTTCAAAAGCACAGTTCTGCTCGCTTCAGTCGATTTTTTACTTTCACTAAATGGAGAAGTATCATTCTATGTTGTCGGTGTA
GGAATGCCGGTTGCCAGGAAACAATCACTACAACGTTTTCTTGAGAAGCGAAAAGAGAGgtactctctggtttctctggaacaatgtgcatttatcagataaacactgaataaaccactatttatagcctttgtaaagttgatggtatgtggatatttccggcaactgcagGCTGAACAGCACTACACCTTACATGATAA
AACCGACCTCGTGGAAAACGCCTGCATGTAATGAGGGACTCGGCAGTGTTTCCCTTGCTTCTCCGATGGTGTAAATTCACTAACCATTGAGCCACCACTGGTTGGCATCCCCTCGGAACAGCTAATCGGTAAAGATTCTAAACTCCTCAAATATCACATTCCAT
Intron 5 GTAATTAAAT ... GTCGGTGTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 6.67 | 42 | 1 | 5 |
| A2 | 15.15 | 14 | 1 | 4 |
| A3 | 7.94 | 29 | 2 | 3 |
| A4 | 8.33 | 22 | 2 | 2 |
| A5 | 11.11 | 4 | 1 | 0 |
| A6 | 1.44 | 239 | 1 | 6 |
| A7 | 1.39 | 248 | 1 | 6 |
| A8 | 1.4 | 318 | 0 | 9 |
| A9 | 2.72 | 322 | 8 | 10 |
| A10 | 5.97 | 189 | 5 | 19 |
>TRINITY_DN119385_c0_g1_i4 from sample A1 / Example spliced isoformTATTTGTTTAAAGTCTTAAATTAGGTTTTATACATTTTCTCATGATGGCCGAGTATTTTCACCGGCAGGCTGAAGAGATTATGATGTTTGCCACCACTGCAATTTCTAATGGTAAGGCCAGTTCCTCTCCTACGACTACTTGCGGGCCTTCACGCAGTAAGTTCATGTCCATGGCAATACCAGCAGAGAACTTCGAGGCG
ACATCTGCGAAGCAACAACCGACTCGCAAATTGATAACCGGAATGCCGGTTGCCAGGAAACAATCACTACAACGTTTTCTTGAGAAGCGAAAAGAGAGGCTGAACAGCACTACACCTTACATGATAAAACCGACCTCGTGGAAAACGCCTGCATGTAATGAGGGACTCGGCAGTGTTTCCCTTGCTTCTCCGATGGTGTA
AATTCACTAACCATTGAGCCACCACTGGTTGGCATCCCCTCGGAACAGCTAATCGTTTGGACACTTTTATTTTACAAGAAGCAGGTCATCAGTATTTGATATTTATTTCTCATCTTTCAATAATTGTTACATACTGTTATAGAAAACTAGGAAGAGAATTAAACTGATTCAATGGGCTTTTAGAATGGTCTTCATCTTTC
CACGATGACAGCCACCTTTCATCCTTGAGTGTGAGGATTTCCAGTTAGAAAAGAAAAATAGAAAATTACAAAAAAATATAGGATACTGGCTG
>TRINITY_DN119385_c0_g1_i8 from sample A1 / Example unspliced isoform:CATCCCCTCGGAACAGCTAATCGCAGGGAACTTCGAGGCGACATCTGCGAAGCAACAACCGACTCGCAAATTGATAACCGgtaattaaatcgctcgatacacgacctatgtacttctccttcaaaagcacagttctgctcgcttcagtcgattttttactttcactaaatggagaagtatcattctatgttgtcggtgta
gGAATGCCGGTTGCCAGGAAACAATCACTACAACGTTTTCTTGAGAAGCGAAAAGAGAGGTACTCTCTGGTTTCTCTGGAACAATGTGCATTTATCAGATAAACACTGAATAAACCACTATTTATAGCCTTTGTAAAGTTGATGGTATGTGGATATTTCCGGCAACTGCAGGCTGAACAGCACTACACCTTACATGATAA
AACCGACCTCGTGGAAAACGCCTGCATGTAATGAGGGACTCGGCAGTGTTTCCCTTGCTTCTCCGATGGTGTAAATTCACTAACCATTGAGCCACCACTGGTTGGCATCCCCTCGGAACAGCTAATCGGTAAAGATTCTAAACTCCTCAAATATCACATTCCAT