sp|Q9XI98|RAG3E_ARATH ----> Ras-related protein RABG3e

Intron 1 GTGTTGCCTT ... TATAATTCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	82.44	69	324	127
A2	86.69	43	280	89
A3	84.97	58	328	135
A4	88.69	32	251	88
A5	84.35	23	124	53
A6	88.16	261	1943	576
A7	86.01	280	1722	528
A8	84.29	253	1357	456
A9	85.69	283	1694	579
A10	86.33	219	1383	426

>TRINITY_DN48574_c0_g4_i4 from sample A10 / Example spliced isoform

TGGGTTCTGTTGATTTTTTGTGGGCAAGGTTGGTAAAACCTCGTTGATGAATCAATATGTAAACAAGAAATTCAATAACCAGTATAAATCAACCATTGGAGCAGATTTCTTGACAAAAGAAGTTCAATTTGAGGATGGATTGTTCACTTTACATATATGGGATACTGCTGGCCAAGAAAGATTTCAGAGCCTTGGTACTT

ACTGCTTGGAAATAAAATTGATGTGGATGGTGGGAACAGCAGAGTGGTTTCTGAGAAAAAGGCCAGGGCATGGTGTGCTTCTAAAGGCAACATTCCCTACTTCGAAACTTCTGCAAAAGAGGGCTTTAATGT

>TRINITY_DN48574_c0_g4_i2 from sample A10 / Example unspliced isoform:

TGGGTTCTGTTGATTTTTTGTGGGCAAGGTTGGTAAAACCTCGTTGATGAATCAATATGTAAACAAGAAATTCAATAACCAGTATAAATCAACCATTGGAGCAGATTTCTTGACAAAAGAAGTTCAATTTGAGGATGGATTGTTCACTTTACATATATGGGATACTGCTGGCCAAGAAAGATTTCAGAGCCTTGgtgttg
ccttctaccgtggtgctgattgatgtgttcttgtttacaatgttaacgtgctaaaatcattcgataacctaaataattggtgtgatgaatttataattcagGTACTTACTGCTTGGAAATAAAATTGATGTGGATGGTGGGAACAGCAGAGTGGTTTCTGAGAAAAAGGCCAGGGCATGGTGTGCTTCTAAAGGCAACAT
TCCCTACTTCGAAACTTCTGCAAAAGAGGGCTTTAATGT

Intron 2 GTGCTGATTG ... TATAATTCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	76.62	63	286	127
A2	78.44	47	253	89
A3	79.35	57	303	135
A4	83.81	31	233	88
A5	72.09	30	102	53
A6	80.93	276	1767	576
A7	76.62	317	1550	528
A8	74.68	285	1225	456
A9	76.88	319	1543	579
A10	76.03	266	1261	426

>TRINITY_DN48574_c0_g4_i3 from sample A10 / Example spliced isoform

TGGGTTCTGTTGATTTTTTGTGGGCAAGGTTGGTAAAACCTCGTTGATGAATCAATATGTAAACAAGAAATTCAATAACCAGTATAAATCAACCATTGGAGCAGATTTCTTGACAAAAGAAGTTCAATTTGAGGATGGATTGTTCACTTTACATATATGGGATACTGCTGGCCAAGAAAGATTTCAGAGCCTTGGTGTTG
CCTTCTACCGTGGTACTTACTGCTTGGAAATAAAATTGATGTGGATGGTGGGAACAGCAGAGTGGTTTCTGAGAAAAAGGCCAGGGCATGGTGTGCTTCTAAAGGCAACATTCCCTACTTCGAAACTTCTGCAAAAGAGGGCTTTAATGTTGAAGCAGCTTTCCATTGTATAGCCAAGAATGCATTGGAGAACGAGCCTG
AAGAGGAGATATATCTGCCGGACACAATTGATGTCAATGCTGGGAGACCACAAAGAGCATCAGGATGTGATTGTTAGTCGCCAGGGGATCATACAAGACTTTGATGCTACAAATAATAGTTTACTTGCATG

>TRINITY_DN48574_c0_g4_i2 from sample A10 / Example unspliced isoform:

TGGGTTCTGTTGATTTTTTGTGGGCAAGGTTGGTAAAACCTCGTTGATGAATCAATATGTAAACAAGAAATTCAATAACCAGTATAAATCAACCATTGGAGCAGATTTCTTGACAAAAGAAGTTCAATTTGAGGATGGATTGTTCACTTTACATATATGGGATACTGCTGGCCAAGAAAGATTTCAGAGCCTTGGTGTTG
CCTTCTACCGTGgtgctgattgatgtgttcttgtttacaatgttaacgtgctaaaatcattcgataacctaaataattggtgtgatgaatttataattcagGTACTTACTGCTTGGAAATAAAATTGATGTGGATGGTGGGAACAGCAGAGTGGTTTCTGAGAAAAAGGCCAGGGCATGGTGTGCTTCTAAAGGCAACAT
TCCCTACTTCGAAACTTCTGCAAAAGAGGGCTTTAATGT