sp|Q65XV2|XB3_ORYSJ ----> E3 ubiquitin-protein ligase XB3
Intron 1 GTGAGAGATC ... ACATTTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 17.06 | 301.4 | 29.7 | 62 |
| A2 | 20.49 | 225 | 18.5 | 58 |
| A3 | 15.36 | 249 | 33.5 | 45.2 |
| A4 | 19.88 | 187 | 11.4 | 46.4 |
| A5 | 18.21 | 105 | 16.6 | 23.4 |
| A6 | 15.19 | 182 | 22.4 | 32.6 |
| A7 | 13.3 | 401.4 | 39.7 | 61.6 |
| A8 | 15.69 | 216 | 12.6 | 40.2 |
| A9 | 12.35 | 325.6 | 36.4 | 45.9 |
| A10 | 11.46 | 323 | 33.1 | 41.8 |
>TRINITY_DN109739_c0_g2_i2 from sample A1 / Example spliced isoformAGTGAATAAATAAAAACAAACTTTCAGATTTTGACAGCAAAGGCTGCTGAGAGCTGGGGTCCCATTGGCCCCCGTACGTTTGTTTTACACTTAGAGTTTCAGTGTCAACCTGTTATATGTGATAAGTAAGAGAAGTGAGGGAGGGGATCTCTCATGGGGCTGGTAGTTAGCTGTGGGAATAGAGAGGGGGAGCTCTTGTT
GGATGCGATCATGGCAGGAGACGTTACTTTGGTGAGAAAACTGATAGGAAAGGATCCCCGCTTACTCAATAAACCTCTCAACTCTTACCAGCGGCTCACCTCCCTGCATATTGCTGCACTCTATGGCCGCACTCATGTTATGGAAGTTCTTCTGGAGGCGGGAGCCGAGCCAAATTTGTGTGGTACCAAAGCAAGGACTC
CGTTGATGGTGGCTTGCAAGCGAGGGAAAACACCATGCGTAGAACGTTTGCTTCGATCCGGAGCAAATGTGCTGGCATTTGAAGCATCTAATGGAAGAACATGTCTGCATTACGCTGCGAAAGGAGGCCATTACGAATGCGTTGAAAGAATCATAGATGCTTCAAGGACAGGCCCAGTTGCCCAGTCTTGGGGATTTGTC
CGCTTTCTTAATGTAAGAGATGCTATTGGAACAACCCCTCTTCATATGGCTGCCCGAGCTGGGAAGGCTAATATCTGTCGTTTGCTGTTGGAGAACGGGGCATTTGTCTCAGCAACCACTTCCACATTTGGTTTCGGGCCAAAGCATGGAAGCACAACTCTTCATAGCGCAGCTAAGGGAGGATCCGTAGAAGTAATCCA
TGAGTTGCTCGCATGGGGAGCTGACCGCACGCAAAGGGACCTTATGGGGTATACTCCATATGAATTAGCAGTGAAGCACAACAACATGGCATGTGCTGCCATTTTGAACCCCAAGGTAGTAGAGCCCATGGTGTGGCCATCTCCCTGGAAATTCATTAGCAATTTAGAACCCCAAACCAAGTCGATATTGCAAGCTGCTC
TTGTTGAAGCTAATCAGGAAAGGGAGAAGGGTTTTCATGTTGTCACCAAGGAGAAAGAAGATGCAGAATGTGATTCTCAATCAGTCTCTGGGAGATTTAAGAGTGAGCATCAGGAAGAGCCCATACAGACTGGAGGAATGGGTGTGATGGAAATATGCTGTATTTGCTTTGAGAAGTTCTGCACTATTGAAGTTAAGGAC
TGTGGACATCAAATGTGTGCATCTTGCACTCTGGAGCTATGTTGCCACAACAAGCCCAATCCATTAATTCCTTTTTCTCCTCCTCCTGCCTGCCCTTTCTGTCGAGGTACCATCGGACAGCTGGTTTTGGCAGAGCCCAAACACATGGAAATGACGGACAAAGACATGATGGAGTTGGCTAAGAGCAGGTCCAAGAGATT
CAAGAAGCAAAGCTCGAGTAGCATTAGCAAATGCTCTATTAGCTCTGGAGGAGGAAGCAAAGGAGGGTCTTTCCGAATCTTAGGGAAAGGATCAGGAAGAATTGTAGATGCAGAGTGGATGACTCACTTATAATTCATTCTTCTATCATGAAATTCTTTATCTTCGTATCACTGCCTTAATAATTGCAATTTTCAATCCC
ATAATATAACCTCCTTGGAAGAAGCTTCTCAAAGTAAAAGAAAGAAATGGCTTATATGCAATCCTAATGGGAAACAGAGCTAGAAACCTCAACACCAAGAAGAAGTTGTGAGGGAGAAGAAACTCCAAATTCATTCTGATTATTCCAGTGTCTGTGCTGCCTTTTCTGCATTTCAAGCTTTTCCCTGTGGCACGAAGTGA
TGTATAGGAGCTCCAAAGAACTTTTGTCTGAATAAAATTCTGTTCAGAAGTACAATCAGTTCTAATCTTCAGCAAATAAGAGCACAGATGAAGACATTCGTTGGGTTTATAAGATATATTTATTGATGTGAATGAACATTGCACAGGTTTTAGTGATACAAATGTATATTCCTCAAAATTTCCCAGCATTACCTGCCCTT
TTTTCCCAGTGAAAGCGTATGTGGTTAGACAAAGTGAATGTCCCTAGAATTTTTCGAGATCATGTGAATGGACACTCTACAGTTTTTAGTAATAAAAATGTCTCTCCCTCAA
>TRINITY_DN109739_c0_g2_i1 from sample A1 / Example unspliced isoform:TGCTTCGATCCGGAGCAAATgtgagagatcaaggatagcccgttattattaagtattcttgaattaggaaaacttaatatggatcatgtgggttttcatacatttgcagGTGCTGGCATTTGAAGCATCTAATGGAAGAACATGTCTGCATTACGCTGCGAAAGGAGGCCATTACGAATGCGTTGAAAGAATCATAGATG
CTTCAAGGACAGGCCCAGTTGCCCAGTCTTGGGGATTTGTCCGCTTTCTTAATGTAAGAGATGCTATTGGAACAACCCCTCTTCATATGGCTGCCCGAGCTGGGAAGGCTAATATCTGTCGTTTGCTGTTGGAGAACGGGGCATTTGTCTCAGCAACCACTTCCACATTTGGTTTCGGGCCAAAGCATGGAAGCACAACT
CTTCATAGCGCAGCTAAGGGAGGATCCGTAGAAGTAATCCATGAGTTGCTCGCATGGGGAGCTGACCGCACGCAAAGGGACCTTATGGGGTATACTCCATATGAATTAGCAGTGAAGCACAACAACATGGCATGTGCTGCCATTTTGAACCCCAAGGTAGTAGAGCCCATGGTGTGGCCATCTCCCTGGAAATTCATTAG
CAATTTAGAACCCCAAACCAAGTCGATATTGCAAGCTGCTCTTGTTGAAGCTAATCAGGAAAGGGAGAAGGGTTTTCATGTTGTCACCAAGGAGAAAGAAGATGCAGAATGTGATTCTCAATCAGTCTCTGGGAGATTTAAGAGTGAGCATCAGGAAGAGCCCATACAGACTGGAGGAATGGGTGTGATGGAAATATGCT
GTATTTGCTTTGAGAAGTTCTGCACTATTGAAGTTAAGGACTGTGGACATCAAATGTGTGCATCTTGCACTCTGGAGCTATGTTGCCACAACAAGCCCAATCCATTAATTCCTTTTTCTCCTCCTCCTGCCTGCCCTTTCTGTCGAGGTACCATCGGACAGCTGGTTTTGGCAGAGCCCAAACACATGGAAATGACGGAC
AAAGACATGATGGAGTTGGCTAAGAGCAGGTCCAAGAGATTCAAGAAGCAAAGCTCGAGTAGCATTAGCAAATGCTCTATTAGCTCTGGAGGAGGAAGCAAAGGAGGGTCTTTCCGAATCTTAGGGAAAGGATCAGGAAGAATTGTAGATGCAGAGTGGATGACTCACTTATAATTCATTCTTCTATCATGAAATTCTTT
ATCTTCGTATCACTGCCTTAATAATTGCAATTTTCAATCCCATAATATAACCTCCTTGGAAGAAGCTTCTCAAAGTAAAAGAAAGAAATGGCTTATATGCAATCCTAATGGGAAACAGAGCTAGAAACCTCAACACCAAGAAGAAGTTGTGAGGGAGAAGAAACTCCAAATTCATTCTGATTATTCCAGTGTCTGTGCTG
CCTTTTCTGCATTTCAAGCTTTTCCCTGTGGCACGAAGTGATGTATAGGAGCTCCAAAGAACTTTTGTCTGAATAAAATTCTGTTCAGAAGTACAATCAGTTCTAATCTTCAGCAAATAAGAGCACAGATGAAGACATTCGTTGGGTTTATAAGATATATTTATTGATGTGAATGAACATTGCACAGGTTTTAGTGATAC
AAATGTATATTCCTCAAAATTTCCCAGCATTACCTGCCCTTTTTTCCCAGTGAAAGCGTATGTGGTTAGACAAAGTGAATGTCCCTAGAATTTTTCGAGATCATGTGAATGGACACTCTACAGTTTTTAGTAATAAAAATGTCTCTCCCTCAA