sp|Q9SIJ9|PME11_ARATH ----> Putative pectinesterase 11
Intron 1 GTAAGCCACT ... CTTTTTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 20.25 | 18 | 3.5 | 4.6 |
| A2 | 11.85 | 23 | 1.5 | 3.2 |
| A3 | 4.21 | 18 | 1 | 0.8 |
| A4 | 14.85 | 16 | 2 | 2.8 |
| A5 | 40.95 | 12 | 0 | 8.4 |
| A6 | 16.28 | 115 | 4.5 | 23.4 |
| A7 | 17.52 | 204 | 9.5 | 45.4 |
| A8 | 13.92 | 198 | 6 | 33.2 |
| A9 | 14.49 | 213 | 10.5 | 37.4 |
| A10 | 7.95 | 154 | 9 | 13.6 |
>TRINITY_DN116084_c0_g1_i2 from sample A1 / Example spliced isoformCGAAAGTTTGCGCATTAGCGGAAGGAATAACGGAAGGAAAGTTTGAAATATGGCGCAGGGAGGTTGTCTCAGGGTTTAAGACAGAGGGTGAAAGTGAAGAAAAAGCCTGGCCAGACACGTTACTATTTCATAGGAACTTGCTGTTCTTGGATTGTCGTTCGCAGGGGAGCCGAGGCCACAGATTCCTTCCGCGAATGGAA
GGACTTTGACCAGCTTTTCCTGTGATTCGATTGCGCCTTCTACTCTTACGTTCACAACTGATTACGATTTTAATTCATCAGTTTGGGTTTCTAGCAACGTACCAGCTGATCGGTGTAATATCTATCTTTCTATTGCAAATCTCCCTCGGTTGAGATATTCATGGCCAACAGTAAAAGATTATTCGATATCTGTTTGTTCC
ATGCAGTGTTGCACGTCTGTTTTCTGCAATCTGTCTACTCTACCAGTAAAGTTTCTAATCAATATATTATTCGTGACAATCATACGGAGAAGGATTTTACGGATTCTCAAATACAGAAGGGTTTAAGGAGCTCGTTGGCCGTGGGCACTGATGCTTATCCTGACTATGAGAAAACCCTTGTTCTGAAAGTATCTAAGGAC
AAATTTACAGGCGATTTCACAACGGTCCAGGCTGCCATCGATTCAGTTCCAATGCATAACACGCAGCTCATCTTGATTCATGTCAAACCCGGCATTTATAGGGAGAAGGTGTCTATTGCTGCAGAAAAGCCATTCATTATTCTGAGCGGCTCGGGTGCCAACAACACCGTAATCACTTGGAATGATTCCGCTAAATCCAG
TGGAGGGACGTATGACTCGGCAACTTTTTCTGTTTATGCTTCAGATTTTATAGCCACAGATATCACGATCCAGAATTCATATGGTCCAGGTGCTCAAGCTGTGGCGCTAAGGACATTGGGAGATCGTTCTGCGTTTTACAGATGCAAAATTCTGGGATATCAGGACACTTTGTTGGATGAAAGTGGGAACCATTACTTTC
ACGACTGTTTCATCGAAGGTGCCACCGATTTCATATGTGGTGATGGAAACTCTCTTTACGAGAAATGCCATATACATGCCATTCCTCAGAAAACTGGCGCAATTACAGCCCAGAGAAGATCCTCTCCATTGGATGATACAGGTTTCACCTTCTTAAACTGCAGGATTACAGGCAAGGGTTTAATATACCTCGGCAGGGCA
TGGGGACGTTACTCCAGAGTAGTGTTTGCCTGCACTCAAATTGATGACATTATCATTCCACAGGGATGGTATAACTGGGAAGATCCAAGCAGAGAAAAGACTGTGTTCTATGGTCAGTACAATTGTTACGGACCCGGAGCAAACATTAGCAGAAGAGTTCCATGGTCGCACAACCTCACTCCCACTCAGGCCAAACCGTT
TTTGGGCTTCATTAGTGGGCAGATGTGGATCAGAAAGGTGCCCTCTCTTCTGCAAAGGATAGCCATATTGACTAGGATGAAAGGATGAACTATCCATAAAAGGGACATGGATCATGTGCAGATTTAGCTGCTTAAAATCATAACGATTTTAGAATGGCAAGCAAAATTTGAAAAGAACTGTTTCACTCTCACAGCTGTAC
ATTGGTGTTTTGAATTCGTAAACTTCATTCTCA
>TRINITY_DN116084_c0_g1_i9 from sample A1 / Example unspliced isoform:CGAAAGTTTGCGCATTAGCGGAAGGAATAACGGAAGGAAAGTTTGAAATATGGCGCAGGGAGGTTGTCTCAGGGTTTAAGACAGAGGGTGAAAGTGAAGAAAAAGCCTGGCCAGACACGTTACTATTTCATAGGAACTTGCTGTTCTTGGATTGTCGTTCGCAGGGGAGCCGAGGCCACAGATTCCTTCCGCGAATGGAA
GGACTTTGACCAGCTTTTCCTGTGATTCGATTGCGCCTTCTACTCTTACGTTCACAACTGATTACGATTTTAATTCATCAGTTTGGGTTTCTAGCAACGTACCAGCTGATCGGTGTAATATCTATCTTTCTATTGCAAATCTCCCTCGGTTGAGATATTCATGGCCAACAGTAAAAGATTATTCGATATCTGTTTGTTCC
ATGCAGTGTTGCACGTCTGTTTTCTGCAATCTGTCTACTCTACCAGTAAAGTTTCTAATCAATATATTATTCGTGACAATCATACGGAGAAGGATTTTACGGATTCTCAAATACAGAAGGGTTTAAGGAGCTCGTTGGCCGTGGGCACTGATGCTTATCCTGACTATGAGAAAACCCTTGTTCTGAAAGTATCTAAGGAC
AAATTTACAGGCGATTTCACAACGGTCCAGGCTGCCATCGATTCAGTTCCAATGCATAACACGCAGCTCATCTTGATTCATGTCAAACCCGGCATTTATAGGGAGAAGGTGTCTATTGCTGCAGAAAAGCCATTCATTATTCTGAGCGGCTCGGGTGCCAACAACACCGTAATCACTTGGAATGATTCCGCTAAATCCAG
TGGAGGGACGTATGACTCGGCAACTTTTTCTGTTTATGCTTCAGATTTTATAGCCACAGATATCACGATCCAGAATTCATATGGTCCAGGTGCTCAAGCTGTGGCGCTAAGGACATTGGGAGATCGTTCTGCGTTTTACAGATGCAAAATTCTGGGATATCAGGACACTTTGTTGGATGAAAGTGGGAACCATTACTTTC
ACGACTGTTTCATCGAAGGTGCCACCGATTTCATATGTGGTGATGGAAACTCTCTTTACGAGGTAAAACTAAATACAAATCGTGCACTTTGTTTTTGTATTTCAGAGTTCAGATATATAAAAATGATTGCACTTTGTTTATTGCAGAAATGCCATATACATGCCATTCCTCAGAAAACTGGCGCAATTACAGCCCAGAGA
AGATCCTCTCCATTGGATGATACAGGTTTCACCTTCTTAAACTGCAGGATTACAGGCAAGGGTTTAATATACCTCGGCAGGGCATGGGGACGTTACTCCAGAGTAGTGTTTGCCTGCACTCAAATTGATGACATTATCATTCCACAGGGATGGTATAACTGGGAAGATCCAAGCAGAGAAAAgtaagccactgttatttc
caaacaaaaaggatgtcaacgtccctgcatagactaccagaattttattctaattataccattgctcttgattgtctttttgcagGACTGTGTTCTATGGTCAGTACAATTGTTACGGACCCGGAGCAAACATTAGCAGAAGAGTTCCATGGTCGCACAACCTCACTCCCACTCAGGCCAAACCGTTTTTGGGCTTCATT
AGTGGGCAGATGTGGATCAGAAAGGTGCCCTCTCTTCTGCAAAGGATAGCCATATTGACTAGGATGAAAGGATGAACTATCCATAAAAGGGACATGGATCATGTGCAGATTTAGCTGCTTAAAATCATAACGATTTTAGAATGGCAAGCAAAATTTGAAAAGAACTGTTTCACTCTCACAGCTGTACATTGGTGTTTTGA
ATTCGTAAACTTCATTCTCA
Intron 2 GTAAAACTAA ... TTTATTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 26.73 | 37 | 11 | 16 |
| A2 | 17.95 | 32 | 7 | 7 |
| A3 | 17.24 | 36 | 9 | 6 |
| A4 | 8.7 | 21 | 3 | 1 |
| A5 | 9.09 | 25 | 3 | 2 |
| A6 | 19.67 | 96 | 30 | 17 |
| A7 | 18.27 | 132 | 26 | 33 |
| A8 | 20.31 | 153 | 46 | 32 |
| A9 | 13.74 | 157 | 22 | 28 |
| A10 | 20.34 | 94 | 26 | 22 |
>TRINITY_DN116084_c0_g1_i2 from sample A1 / Example spliced isoformCGAAAGTTTGCGCATTAGCGGAAGGAATAACGGAAGGAAAGTTTGAAATATGGCGCAGGGAGGTTGTCTCAGGGTTTAAGACAGAGGGTGAAAGTGAAGAAAAAGCCTGGCCAGACACGTTACTATTTCATAGGAACTTGCTGTTCTTGGATTGTCGTTCGCAGGGGAGCCGAGGCCACAGATTCCTTCCGCGAATGGAA
GGACTTTGACCAGCTTTTCCTGTGATTCGATTGCGCCTTCTACTCTTACGTTCACAACTGATTACGATTTTAATTCATCAGTTTGGGTTTCTAGCAACGTACCAGCTGATCGGTGTAATATCTATCTTTCTATTGCAAATCTCCCTCGGTTGAGATATTCATGGCCAACAGTAAAAGATTATTCGATATCTGTTTGTTCC
ATGCAGTGTTGCACGTCTGTTTTCTGCAATCTGTCTACTCTACCAGTAAAGTTTCTAATCAATATATTATTCGTGACAATCATACGGAGAAGGATTTTACGGATTCTCAAATACAGAAGGGTTTAAGGAGCTCGTTGGCCGTGGGCACTGATGCTTATCCTGACTATGAGAAAACCCTTGTTCTGAAAGTATCTAAGGAC
AAATTTACAGGCGATTTCACAACGGTCCAGGCTGCCATCGATTCAGTTCCAATGCATAACACGCAGCTCATCTTGATTCATGTCAAACCCGGCATTTATAGGGAGAAGGTGTCTATTGCTGCAGAAAAGCCATTCATTATTCTGAGCGGCTCGGGTGCCAACAACACCGTAATCACTTGGAATGATTCCGCTAAATCCAG
TGGAGGGACGTATGACTCGGCAACTTTTTCTGTTTATGCTTCAGATTTTATAGCCACAGATATCACGATCCAGAATTCATATGGTCCAGGTGCTCAAGCTGTGGCGCTAAGGACATTGGGAGATCGTTCTGCGTTTTACAGATGCAAAATTCTGGGATATCAGGACACTTTGTTGGATGAAAGTGGGAACCATTACTTTC
ACGACTGTTTCATCGAAGGTGCCACCGATTTCATATGTGGTGATGGAAACTCTCTTTACGAGAAATGCCATATACATGCCATTCCTCAGAAAACTGGCGCAATTACAGCCCAGAGAAGATCCTCTCCATTGGATGATACAGGTTTCACCTTCTTAAACTGCAGGATTACAGGCAAGGGTTTAATATACCTCGGCAGGGCA
TGGGGACGTTACTCCAGAGTAGTGTTTGCCTGCACTCAAATTGATGACATTATCATTCCACAGGGATGGTATAACTGGGAAGATCCAAGCAGAGAAAAGACTGTGTTCTATGGTCAGTACAATTGTTACGGACCCGGAGCAAACATTAGCAGAAGAGTTCCATGGTCGCACAACCTCACTCCCACTCAGGCCAAACCGTT
TTTGGGCTTCATTAGTGGGCAGATGTGGATCAGAAAGGTGCCCTCTCTTCTGCAAAGGATAGCCATATTGACTAGGATGAAAGGATGAACTATCCATAAAAGGGACATGGATCATGTGCAGATTTAGCTGCTTAAAATCATAACGATTTTAGAATGGCAAGCAAAATTTGAAAAGAACTGTTTCACTCTCACAGCTGTAC
ATTGGTGTTTTGAATTCGTAAACTTCATTCTCA
>TRINITY_DN116084_c0_g1_i5 from sample A1 / Example unspliced isoform:CGAAAGTTTGCGCATTAGCGGAAGGAATAACGGAAGGAAAGTTTGAAATATGGCGCAGGGAGGTTGTCTCAGGGTTTAAGACAGAGGGTGAAAGTGAAGAAAAAGCCTGGCCAGACACGTTACTATTTCATAGGAACTTGCTGTTCTTGGATTGTCGTTCGCAGGGGAGCCGAGGCCACAGATTCCTTCCGCGAATGGAA
GGACTTTGACCAGCTTTTCCTGTGATTCGATTGCGCCTTCTACTCTTACGTTCACAACTGATTACGATTTTAATTCATCAGTTTGGGTTTCTAGCAACGTACCAGCTGATCGGTGTAATATCTATCTTTCTATTGCAAATCTCCCTCGGTTGAGATATTCATGGCCAACAGTAAAAGATTATTCGATATCTGTTTGTTCC
ATGCAGTGTTGCACGTCTGTTTTCTGCAATCTGTCTACTCTACCAGTAAAGTTTCTAATCAATATATTATTCGTGACAATCATACGGAGAAGGATTTTACGGATTCTCAAATACAGAAGGGTTTAAGGAGCTCGTTGGCCGTGGGCACTGATGCTTATCCTGACTATGAGAAAACCCTTGTTCTGAAAGTATCTAAGGAC
AAATTTACAGGCGATTTCACAACGGTCCAGGCTGCCATCGATTCAGTTCCAATGCATAACACGCAGCTCATCTTGATTCATGTCAAACCCGGCATTTATAGGGAGAAGGTGTCTATTGCTGCAGAAAAGCCATTCATTATTCTGAGCGGCTCGGGTGCCAACAACACCGTAATCACTTGGAATGATTCCGCTAAATCCAG
TGGAGGGACGTATGACTCGGCAACTTTTTCTGTTTATGCTTCAGATTTTATAGCCACAGATATCACGATCCAGAATTCATATGGTCCAGGTGCTCAAGCTGTGGCGCTAAGGACATTGGGAGATCGTTCTGCGTTTTACAGATGCAAAATTCTGGGATATCAGGACACTTTGTTGGATGAAAGTGGGAACCATTACTTTC
ACGACTGTTTCATCGAAGGTGCCACCGATTTCATATGTGGTGATGGAAACTCTCTTTACGAGgtaaaactaaatacaaatcgtgcactttgtttttgtatttcagagttcagatatataaaaatgattgcactttgtttattgcagAAATGCCATATACATGCCATTCCTCAGAAAACTGGCGCAATTACAGCCCAGAGA
AGATCCTCTCCATTGGATGATACAGGTTTCACCTTCTTAAACTGCAGGATTACAGGCAAGGGTTTAATATACCTCGGCAGGGCATGGGGACGTTACTCCAGAGTAGTGTTTGCCTGCACTCAAATTGATGACATTATCATTCCACAGGGATGGTATAACTGGGAAGATCCAAGCAGAGAAAAGACTGTGTTCTATGGTCA
GTACAATTGTTACGGACCCGGAGCAAACATTAGCAGAAGAGTTCCATGGTCGCACAACCTCACTCCCACTCAGGCCAAACCGTTTTTGGGCTTCATTAGTGGGCAGATGTGGATCAGAAAGGTGCCCTCTCTTCTGCAAAGGATAGCCATATTGACTAGGATGAAAGGATGAACTATCCATAAAAGGGACATGGATCATG
TGCAGATTTAGCTGCTTAAAATCATAACGATTTTAGAATGGCAAGCAAAATTTGAAAAGAACTGTTTCACTCTCACAGCTGTACATTGGTGTTTTGAATTCGTAAACTTCATTCTCA