sp|Q9S7R7|EAP3_ARATH ----> Protein ENDOPLASMIC RETICULUM-ARRESTED PEN3
Intron 1 GTATGAGATA ... CCTTCTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 66.55 | 50 | 100 | 19.3 |
| A2 | 67.61 | 34.3 | 72 | 8 |
| A3 | 75.15 | 35.3 | 107 | 23.7 |
| A4 | 68.73 | 20 | 44 | 8.7 |
| A5 | 76.12 | 22.3 | 71.3 | 10 |
| A6 | 81.56 | 122.7 | 544.3 | 26 |
| A7 | 70.93 | 207 | 506.7 | 57.3 |
| A8 | 77.49 | 157.3 | 542.7 | 34.3 |
| A9 | 79.14 | 121 | 460.7 | 32.3 |
| A10 | 70.31 | 197 | 467.7 | 62.3 |
>TRINITY_DN111586_c1_g3_i5 from sample A5 / Example spliced isoformGGCATCCTTCTGGAATATGGATATGGATGGCAAAATGGTCAACGATGTAATACGCTGGATGTAGTCTGCTTAGACACGGCTTTCCATTCGACGACCTTTAAAAACCTCGGGCAACCTCCTTCTCGATTCATTTCATTTTGATCTCCCACCCCTCCATCGATTAGCAGAAATTTAAGGACTCAGTGCAAGAATCAATCCAG
CAAGGAAGCCATGAATGGCCTGGCATCTGAAGGGCCCCGGGTCCGGGGATCGAATCGCAGAGTGAAGATCGATGTCGGAGGCAAAATCTTCGAAACCACGGTTTCGACCCTCCAATCTGCAGGGCAAGCGTCCCTCCTCGCCCGTTCGGCTCTGTCCACCGACTCCGCTGAAATCTTCTTCGACAGAGACCCGCATCTGT
TCGCGCTCCTCCTTGCCGTTCTCCGCACGGGAAAGCTCTCGACATCGACATGGGAAAAATTCGACAGCGAAGCCCTCATAGACGAAGCCTCTTATTACGGAATCCTGGAGCCCGTCAAGAAAGCCATGGCCCCAGCGGCCTTAGACGGAATCGATGTCGAAAGAGTCTCAATGGTTGTTCCCAATGGCCGGGATTATCCT
TCGGCCATCTGCTCTGCACACGACGGCTCCGTCTGGGTAGGTCACGGCAGCAAAATCACGGCATACGACTGGGCGCTCAGGAAGCAGACCACGACATTGTCGGATCTTCACAGTGTCGACACCATGAACAGGATCTCGGAAACCCTAGCGGCCGTCGGCGCAGAGGATTTTCCGGGATTGCACATATATGACACCAAGAA
CGGGGTGCATGTGAAGAGCCTGACTTGGTTAGACAAATCCGACACGCACGTCTACCGCCCCTGCAGTCAACCCCTCACCTCATCGGATTCTTTCATCTTCGCGAGCTTCGAGAACGGGCAGAGGACCGAGAACACGATCCTCGTTGTCGACAAGGAGAGGCTCGAGGTTTCTCGAGAGATCGACAAACAAAGCGGAACTC
TGCGCACTCGAAGGTTTCAACGATTTTGCAGTTTGTGAATTCTGAAAACCTTCTCATGGTCGGAGGTGTTCACGGCGGCACCTTCGGATTCAATGGTTACATTCATCTTTTTGATGTGCGGGCCGACAAGATTGTGTGGGATTGGTCCGAGCCGAATGCGAACGTGGATCCGAGGATGATAGAACGAGATAGCTTCACAG
ATGTGGTGGTGAGCGAGGAACTTGGTGGTATCGTCAAGGTGAACATTATGAGAGGTAATCTTGCCATGGCTGACCTCAGGCGATTGTCGGAGTCGCAGAATCCGTGGATTCCTCTCACTGAGACGAACCCCGCCGTAGCTGTCAAAGGGGGAACGCCTGATGCCAAGATCGTGACTTATGGCAGACAGGTTTTTTTCAAT
AGGGGAGAGGATTTGGAGGTCTGGTCGGAGGTTCCTGTAATGTCAAAATCGTCGGTGGAGATGGAGGTGGAGGAGAAGAAATTCAGAAGGAATTTTATTGAGCATAGTAGGAGAGGCCATCAAATTACTTCGCTATCTGTCGGAGGAGACCGATTGTTTGTAGCGAGGTGGGAGATGCAGGGAGTTGAGGTCTAGGAAAC
CAAGGGCTAATTGAGGTCCATTCCTCAAACCAGTTCATGGTGTTCAGGGTGTAGGCCCTCGAGTGATCACTGTTTCAGATTCCTCGTTGTTCGAGCAAATCCGAGACGTGCCATGCAAGTTTTGTGCACAGGGTATCATGTTCAGGAAGTTTCTTCAAACTTGGATGTTGAACGAAAACTACCCATTCACATACCAGGTG
CCTCCTTGATTATTTCAGTGGAATACTCAACCTTTCTTGATGGAATTAGTATTAGCTCCAAGCTATTTCAGTGCGGTTATTTTCATATGTCGAATAGAGCAGTGGGTTGATCAAGCAACAAAGAGTCACTAAGTATGTGCAGGATTTCTCCACCTGCCCCTTAGTTATGAGGATATATACCCACCTGGGGCTTGGTCATA
TCCTCCTCGGACAGAAAGGACCCCCCTGAGCAGATGTAACGCCGGCAACGAGAAGAAACCAACAGTTCATTCGCAGCCCGTGGCCATTGAAGAACCATTGAAGCAAATGGGGTCTGAACATTATCGGTGAGATCAAGAATGTCATGGAGACTCTCAGACTCGATCTTCCACCCAATTGCGGTCTACAATTTTTCAAGGAT
GCCATCGCGGACAAAATTCCCTCAATTCATC
>TRINITY_DN111586_c1_g3_i8 from sample A5 / Example unspliced isoform:GGCATCCTTCTGGAATATGGATATGGATGGCAAAATGGTCAACGATGTAATACGCTGGATGTAGTCTGCTTAGACACGGCTTTCCATTCGACGACCTTTAAAAACCTCGGGCAACCTCCTTCTCGATTCATTTCATTTTGATCTCCCACCCCTCCATCGATTAGCAGAAATTTAAGGACTCAGTGCAAGAATCAATCCAG
CAAGGAAGCCATGAATGGCCTGGCATCTGAAGGGCCCCGGGTCCGGGGATCGAATCGCAGAGTGAAGATCGATGTCGGAGGCAAAATCTTCGAAACCACGGTTTCGACCCTCCAATCTGCAGGGCAAGCGTCCCTCCTCGCCCGTTCGGCTCTGTCCACCGACTCCGCTGAAATCTTCTTCGACAGAGACCCGCATCTGT
TCGCGCTCCTCCTTGCCGTTCTCCGCACGGGAAAGCTCTCGACATCGACATGGGAAAAATTCGACAGCGAAGCCCTCATAGACGAAGCCTCTTATTACGGAATCCTGGAGCCCGTCAAGAAAGCCATGGCCCCAGCGGCCTTAGACGGAATCGATGTCGAAAGAGTCTCAATGGTTGTTCCCAATGGCCGGGATTATCCT
TCGGCCATCTGCTCTGCACACGACGGCTCCGTCTGGGTAGGTCACGGCAGCAAAATCACGGCATACGACTGGGCGCTCAGGAAGCAGACCACGACATTGTCGGATCTTCACAGTGTCGACACCATGAACAGGATCTCGGAAACCCTAGCGGCCGTCGGCGCAGAGGATTTTCCGGGATTGCACATATATGACACCAAGAA
CGGGGTGCATGTGAAGAGCCTGACTTGGTCGGACAAATCCGACACGCGCGTCTACCGCCCCTGCGTTCGAGCCCTCGCCTCGTCCGATTCTTCCATCTTCGCGAGCTTCGAGAACGGGCAGAGGACCGAGAACACGATCCTCGTTGTCGACAAGGAGAGGCTCGAGGTTTCTCGAGAGATCGGCAGACAAAGCGGTAACT
CTGCGCACTCGAAGGTTTCGACGATTTTGCAGTTTGTGAATTCTGAAAACCTTCTCATGGTCGGAGGTGTTCACGGCGGCACCTTCGGATTCAGCGGTTACATTCGTCTTTTTGACGCGCGGGCCGACAAGATTGTGTGGGATTGGTCCGAGCCGAATGCGAACGTGGATCCGAGGATGATAGAACGAGATAGCTTCACA
GATGTGGTGGTGAGCGAGGAACTTGGTGGTATCGTCAAGGTGAACATTATGAGAGGTAATCTTGCCATGGCTGACCTCAGGCGATTGTCGGAGTCGCAGAATCCGTGGATTCCTCTCACTGAGACGAACCCCGCCGTAGCTGTCAAAGGGGGAACGCCTGATGCCAAGATCGTGACTTATGGCAGACAGGTTTTTTTCAA
TAGGGGAGAGGATTTGGAGGTCTGGTCGGAGGTTCCTGTAATGTCAAAATCGTCGGTGGAGATGGAGGTGGAGGAGAAGAAATTCAGAAGGAATTTTATTGAGCATAGTAGGAGAGGCCATCAAATTACTTCGCTATCTGTCGGAGGAGACCGATTGTTTGTAGCGAGGTGGGAGATGCAGGGAGTTGAGGTCTAGGAAA
CCAAGGGCTAATTGAGGTCCATTCCTCAAACCAGgtatgagatagatccatcacttgtgaatgtgggtgggattgataccttaaaaaagttcgatagtttagggaaataacaaaacagattctgggttaagatttaactggcgctaaatttacgtcatcttctgctttgtcctccttctgcagTTCATGGTGTTCAGGGT
GTAGGCCCTCGAGTGATCACTGTTTCAGATTCCTCGTTGTTCGAGCAAATCCGAGACGTGCCATGCAAGTTTTGTGCACAGGGTATCATGTTCAGGAAGTTTCTTCAAACTTGGATGTTGAACGAAAACTACCCATTCACATACCAGGTGCCTCCTTGATTATTTCAGTGGAATACTCAACCTTTCTTGATGGAATTAGT
ATTAGCTCCAAGCTATTTCAGTGCGGTTATTTTCATATGTCGAATAGAGCAGTGGGTTGATCAAGCAACAAAGAGTCACTAAGTATGTGCAGGATTTCTCCACCTGCCCCTTAGTTATGAGGATATATACCCACCTGGGGCTTGGTCATATCCTCCTCGGACAGAAAGGACCCCCCTGAGCAGATGTAACGCCGGCAACG
AGAAGAAACCAACAGTTCATTCGCAGCCCGTGGCCATTGAAGAACCATTGAAGCAAATGGGGTCTGAACATTATCGGTGAGATCAAGAATGTCATGGAGACTCTCAGACTCGATCTTCCACCCAATTGCGGTCTACAATTTTTCAAGGATGCCATCGCGGACAAAATTCCCTCAATTCATC