NA ----> NA
Intron 1 GTAAAGTTAT ... TTTCAAACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 17.65 | 14 | 7.3 | 3 |
| A2 | 15 | 17 | 6.7 | 3 |
| A3 | 21.57 | 40 | 5 | 11 |
| A4 | 33.33 | 8 | 0.7 | 4 |
| A5 | 25 | 3 | 0 | 1 |
| A6 | 14.29 | 6 | 1.3 | 1 |
| A7 | 11.11 | 32 | 3.3 | 4 |
| A8 | 29.9 | 25 | 9 | 10.7 |
| A9 | 12.2 | 36 | 6 | 5 |
| A10 | 18.18 | 27 | 10 | 6 |
>TRINITY_DN109532_c0_g1_i1 from sample A1 / Example spliced isoformTCACCTACAGGAAGTCCCGCGTCTGTATCCCTTCCCGGGCAGCAGCGACGCAGCATGCTCTGCCAGGTCGAATTGGACAGAATGGATTCCCCCGAGCGGTTCTCCGAAAGCGGTTTTGAGGAGGAGAAAATTCTGTTCGAGCAGAGCATTAGAGGAAGGGTTTCGATGAAGCCAGGCGGGAAACCACGGTCTTGCAGGGG
TCTGGTGCGCGGCAGTATTTACAAATTCGTCTCCAAGGTCTTCGACGATCTCCGCTTTCGCGATGTTCTCTGGAGGTCGGCAGTTTTTTCGATGTATACTACAGAAGAGAGGCGGGGGTTTCAGTTTGCAGAGAAAGAAAGACGATGTCAAGAGGACCGCTGTGGTTTGGCATGGATTTCTCTCGATGGACGCCTTCTTA
ATGGAGAGACTGCCACGTCCGTGGAGACAATTGGCGGGCATTTGAGTTGCGAGGAGGCCCTGGCGTGGGAAGGATTTTCACCGCTTCAGAGGGTTTTGATTGTCGCCATTGCCGCAGCTGCGGCTGGCAATTCCAAGCGAGAGCTTGAAATTAAGCCAGACGAACGCTCTTTGGACGATCGGGATAAAGCATTGAATTTT
ATGCGGTGCAAGCTGAACAATCCGTCGGAAAGGATATCTTCTCTTCATGATCAATCAGGTAATGCAAGGATATATTCTTTTCATAATCAATCAGGCAATGCGGATAAAAATAGTAAGAACGGTTATAGGATTACAGAACATAAAGATTATAGTAGTATTGCACGGTTGAGGAATGCTGGTGGTTGTGAGATATGCGGACA
GGCGTTTAATGATGGTTCAAGGAATTGGAAAGGAAAAACAGGGGATGCAGAGAAAATTCATGCACCCTGTGCTGCTGTCATCCTTGAACTGAAGAGGAGAATGGGAAACATGATTGAGAAGGAAGCCTCGAATGTCATGGCTGCATTTGCTTCTGTCCTAGAAAAGGTGGAAACTTTGGAAATCTATGGAAGCACACAAG
ACGGAAAACAGAACGAAGCTCAAGGGGTTGCACTTGGGGATTTCAAAATATCTGTTGAGAGGGCTTCAGCACAAATC
>TRINITY_DN109532_c0_g1_i2 from sample A1 / Example unspliced isoform:TCACCTACAGGAAGTCCCGCGTCTGTATCCCTTCCCGGGCAGCAGCGACGCAGCATGCTCTGCCAGGTCGAATTGGACAGAATGGATTCCCCCGAGCGGTTCTCCGAAAGCGGTTTTGAGGAGGAGAAAATTCTGTTCGAGCAGAGCATTAGAGGAAGGGTTTCGATGAAGCCAGGCGGGAAACCACGGTCTTGCAGGGG
TCTGGTGCGCGGCAGTATTTACAAATTCGTCTCCAAGGTCTTCGACGATCTCCGCTTTCGCGATGTTCTCTGGAGGTCGGCAGTTTTTTCGATGTATACTACAGAAGAGAGGCGGGGGTTTCAGTTTGCAGAGAAAGAAAGACGATGTCAAGAGGACCGCTGTGGTTTGGCATGGATTTCTCTCGATGGACGCCTTCTTA
ATGGAGAGACTGCCACGTCCGTGGAGACAATTGGCGGGCATTTGAGTTGCGAGGAGGCCCTGGCGTGGGAAGGATTTTCACCGCTTCAGAGGGTTTTGATTGTCGCCATTGCCGCAGCTGCGGCTGGCAATTCCAAGCGAGAGCTTGAAATTAAGCCAGACGAACGCTCTTTGGACGATCGGGATAAAGCATTGAATTTT
ATGCGGTGCAAGCTGAACAATCCGTCGGAAAGGATATCTTCTCTTCATGATCAATCAGGTAATGCAAGGATATATTCTTTTCATAATCAATCAGGCAATGCGGATAAAAATAGTAAGAACGGTTATAGGATTACAGAACATAAAGATTATAGTAGTATTGCACGGTTGAGGAATGCTGGTGGTTGTGAGATATGCGGACA
GGCGTTTAATGATGGTTCAAGGAATTGGAAAGGAAAAACAGGGGATGCAGAGAAAATTCATGCACCCTGTGCTGCTGTCATCCTTGAACTGAAGgtaaagttatctgagtgcctctctccaaaaattaacatttgaaatatacaggcgaggactgatcatggattcggatgttttcaaacagAGGAGAATGGGAAACATG
ATTGAGAAGGAAGCCTCGAATGTCATGGCTGCATTTGCTTCTGTCCTAGAAAAGGTGGAAACTTTGGAAATCTATGGAAGCACACAAGACGGAAAACAGAACGAAGCTCAAGGGGTTGCACTTGGGGATTTCAAAATATCTGTTGAGAGGGCTTCAGCACAAATC
Intron 2 GTAATGCAAG ... AGGATTACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 65.81 | 7 | 13 | 14 |
| A2 | 79.26 | 1 | 4.7 | 3 |
| A3 | 44.44 | 4 | 4.7 | 2 |
| A4 | 77.57 | 4 | 11.7 | 16 |
| A5 | 40 | 2 | 3 | 0 |
| A6 | 100 | 0 | 2.7 | 2 |
| A7 | 75.58 | 5 | 18 | 13 |
| A8 | 62.96 | 5 | 5 | 12 |
| A9 | 92.57 | 1 | 13 | 12 |
| A10 | 81.9 | 5 | 23.3 | 22 |
>TRINITY_DN109532_c0_g1_i5 from sample A1 / Example spliced isoformTCACCTACAGGAAGTCCCGCGTCTGTATCCCTTCCCGGGCAGCAGCGACGCAGCATGCTCTGCCAGGTCGAATTGGACAGAATGGATTCCCCCGAGCGGTTCTCCGAAAGCGGTTTTGAGGAGGAGAAAATTCTGTTCGAGCAGAGCATTAGAGGAAGGGTTTCGATGAAGCCAGGCGGGAAACCACGGTCTTGCAGGGG
TCTGGTGCGCGGCAGTATTTACAAATTCGTCTCCAAGGTCTTCGACGATCTCCGCTTTCGCGATGTTCTCTGGAGGTCGGCAGTTTTTTCGATGTATACTACAGAAGAGAGGCGGGGGTTTCAGTTTGCAGAGAAAGAAAGACGATGTCAAGAGGACCGCTGTGGTTTGGCATGGATTTCTCTCGATGGACGCCTTCTTA
ATGGAGAGACTGCCACGTCCGTGGAGACAATTGGCGGGCATTTGAGTTGCGAGGAGGCCCTGGCGTGGGAAGGATTTTCACCGCTTCAGAGGGTTTTGATTGTCGCCATTGCCGCAGCTGCGGCTGGCAATTCCAAGCGAGAGCTTGAAATTAAGCCAGACGAACGCTCTTTGGACGATCGGGATAAAGCATTGAATTTT
ATGCGGTGCAAGCTGAACAATCCGTCGGAAAGGATATCTTCTCTTCATGATCAATCAGAACATAAAGATTATAGTAGTATTGCACGGTTGAGGAATGCTGGTGGTTGTGAGATATGCGGACAGGCGTTTAATGATGGTTCAAGGAATTGGAAAGGAAAAACAGGGGATGCAGAGAAAATTCATGCACCCTGTGCTGCTGT
CATCCTTGAACTGAAG
>TRINITY_DN109532_c0_g1_i1 from sample A1 / Example unspliced isoform:TCACCTACAGGAAGTCCCGCGTCTGTATCCCTTCCCGGGCAGCAGCGACGCAGCATGCTCTGCCAGGTCGAATTGGACAGAATGGATTCCCCCGAGCGGTTCTCCGAAAGCGGTTTTGAGGAGGAGAAAATTCTGTTCGAGCAGAGCATTAGAGGAAGGGTTTCGATGAAGCCAGGCGGGAAACCACGGTCTTGCAGGGG
TCTGGTGCGCGGCAGTATTTACAAATTCGTCTCCAAGGTCTTCGACGATCTCCGCTTTCGCGATGTTCTCTGGAGGTCGGCAGTTTTTTCGATGTATACTACAGAAGAGAGGCGGGGGTTTCAGTTTGCAGAGAAAGAAAGACGATGTCAAGAGGACCGCTGTGGTTTGGCATGGATTTCTCTCGATGGACGCCTTCTTA
ATGGAGAGACTGCCACGTCCGTGGAGACAATTGGCGGGCATTTGAGTTGCGAGGAGGCCCTGGCGTGGGAAGGATTTTCACCGCTTCAGAGGGTTTTGATTGTCGCCATTGCCGCAGCTGCGGCTGGCAATTCCAAGCGAGAGCTTGAAATTAAGCCAGACGAACGCTCTTTGGACGATCGGGATAAAGCATTGAATTTT
ATGCGGTGCAAGCTGAACAATCCGTCGGAAAGGATATCTTCTCTTCATGATCAATCAGgtaatgcaaggatatattcttttcataatcaatcaggcaatgcggataaaaatagtaagaacggttataggattacagAACATAAAGATTATAGTAGTATTGCACGGTTGAGGAATGCTGGTGGTTGTGAGATATGCGGACA
GGCGTTTAATGATGGTTCAAGGAATTGGAAAGGAAAAACAGGGGATGCAGAGAAAATTCATGCACCCTGTGCTGCTGTCATCCTTGAACTGAAGAGGAGAATGGGAAACATGATTGAGAAGGAAGCCTCGAATGTCATGGCTGCATTTGCTTCTGTCCTAGAAAAGGTGGAAACTTTGGAAATCTATGGAAGCACACAAG
ACGGAAAACAGAACGAAGCTCAAGGGGTTGCACTTGGGGATTTCAAAATATCTGTTGAGAGGGCTTCAGCACAAATC