NA ----> NA

Intron 1 GTATATTTCT ... ATCCCTGCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	-1	0	0	0
A2	51.95	4.7	5	3.1
A3	63.09	3.7	6.2	2.1
A4	23.08	10	3	1
A5	44.05	1.4	1	0.6
A6	46.1	18.8	16	2.3
A7	28.69	32.4	13	6.9
A8	33.7	41.4	21	6.3
A9	32.08	72.2	34	12.3
A10	44.51	18.8	15	3.3

>TRINITY_DN120951_c3_g3_i2 from sample A3 / Example spliced isoform

GTTTGTGTGTATCTGTGTATGTTTTTGTGTATCCGTTTGGTGTTTGTCTTTGTCTTTGCATTGTGTGTTGTTTGTCTATGTTTTGTAGCTAATGATGGAGGAGGTTACATTTCCTTGAGTTTGAAATTGATCTTCTGGATATTAAGAGAAGCGGGAAGGGAAAAATAATGAAGGATAGATGCTGCTATCAGGATTCCCAC
AGCCATGACAAGTTGCTAATGAAGAACAGCCTGATTGCGTTTTTCTTCTTTCCCACGGAGAATACCTTGAATATTGATCCCTGCCCACAGTGAGGGATGCAGAATATAAATGAAGGCAAGTACTAAATCAGGGGTTGAGAGACATGAAATCTGTGTGCAACATTTGGAATGAAAATTGCCTATGCATTTTATATTCTCTA
GAGTCTTGCATTCATCATTATTTATAACGATTCGATTTATAGAGACTTGCATCTATTTAAAAATATGGATTCTGATTATATGTGTCATATATTTACCAATACTGAAGCATCTTTTATAACAATAATGACTAGCG

>TRINITY_DN120951_c3_g3_i3 from sample A3 / Example unspliced isoform:

GTTTGTGTGTATCTGTGTATGTTTTTGTGTATCCGTTTGGTGTTTGTCTTTGTCTTTGCATTGTGTGTTGTTTGTCTATGTTTTGTAGCTAATGATGGAGGAGGTTACATTTCCTTGAGTTTGAAATTGATCTTCTGGATATTAAGAGAAGCGGGAAGGGAAAAATAATGAAGGATAGATGCTGCTATCAGGATTCCCAC
AGCCATGACAAgtatatttctttaacagatggtttctcatctttcttattagcaacagagtgccctctttctcatcatactctttctccatgagtatgatgtcgttcctatccctgcagGTTGCTAATGAAGAACAGCCTGATTGCGTTTTTCTTCTTTCCCACGGAGAATACCTTGAATATTGATCCCTGCCCACAGTG
AGGGATGCAGAATATAAATGAAGGCAAGTACTAAATCAGGGGTTGAGAGACATGAAATCTGTGTGCAACATTTGGAATGAAAATTGCCTATGCATTTTATATTCTCTAGAGTCTTGCATTCATCATTATTTATAACGATTCGATTTATAGAGACTTGCATCTATTTAAAAATATGGATTCTGATTATATGTGTCATATAT
TTACCAATACTGAAGCATCTTTTATAACAATAATGACTAGCG