sp|Q93VA3|CYC6_ARATH ----> Cytochrome c6, chloroplastic


Intron 1 GTAACTTCTT ... TGTAATTTAG

Found issues: Low number of reads   


SampleRetention score (%)Exon junction reads5'ss reads3'ss reads
A1-1000
A2100020
A3-1000
A4-1000
A5-1000
A633.33404
A733.33312
A80100
A960457
A1052.38538



>TRINITY_DN43963_c0_g4_i1 from sample A7 / Example spliced isoform
CGTTTGAAGATCAAGGAAATAGTTGAAAACTGCGTTGGAGAAAATGGTCGTGGCATTTCGATTCGTTGTGATTTGCCAAACAAGGAAGTCGCTGAAATGAGCCTTTGCACCACTTTCCCCAATTCCAGGACGTCCTCTATCTTGCCGCTCAAGACCCCTACACCCCAAATCTCCAGACTTACTTCTGGACATCTCAGTGT
GAGATGTTCACAAGGGGATGCAATTCTCCCTGGAAAAGGGGTGAAGGATGATGTGTTGCCCTTTGAGAAGAGAACACAAAAGCTCGGTGCTTCGTTGGTGTCTGGCATTATCAGTATATCAGTAGCTGTCTGTGGAACACATCAAGTGTCTTCGGCACATATGTTAGACAGTCAACAAGGAAAAGCTATATTTCAAAAAG
CATGTATCGGATGCCATTATGAAGGTGGCAATGTTTTGCAGCCTGGTGCAACTTTGACAGCAAGAGACCTGGAAAGGAATGGTGTGGCAACAGAAGAAAACATATTCAAAATTACATATTATGGAAAGGGTCGAATGCCAGGATTTGGTGAGAAGTGTACACCGAAGGGGCAATGCACGTTTGGTCCACGTCTTAGTGAT
GAAGATATTCATTTTCTGGCTGAGTATGTAAAGTTGCAAGCAGACCAAGGGTGGCCAAAGCTAGAACGTACATGATTATTTCAAGATTCATCAAGCACAGCCCACGGCAAGAGATAGTTCTGCACTATTTTGACTTGCTTTTTATCAGAAATATGATATATTTAAAATGATTATTTCAAGATTCATCAAGAACAGCATAT
TGCAAGGGATAGTTCCTCACTTTTTGGACTAGCTTGTTATCAGAGATATGATATTCTAAGACTGATTATTTCAAGATTCATCAAGCACAGCACATTGCAAGGGATGGTTCTGCACTATATGGACTTGCTTGTTATCAGAAATATAATATACTAAAACTGAC


>TRINITY_DN43963_c0_g4_i2 from sample A7 / Example unspliced isoform:
CGTTTGAAGATCAAGGAAATAGTTGAAAACTGCGTTGGAGAAAATGGTCGTGGCATTTCGATTCGTTGTGATTTGgtaacttcttcgagagtgtacttgtgccttcacatgatatgctactgtcgtctaaataatgcggaattacactacaatgcctcgtaaatttctttatttagtgaaaaaaattaataatatctaca
acaaaactgctactctgtctcacttcttggataagattgtcgtttttattctcccaagtctgtaatttag
CCAAACAAGGAAGTCGCTGAAATGAGCCTTTGCACCACTTTCCCCAATTCCAGGACGTCCTCTATCTTGCCGCTCAAGACCCCTACACCCCAAATCTCCAGACTTACTTCTGGACATCTCAGTGTGAGAT
GTTCACAAGGGGATGCAATTCTCCCTGGAAAAGGGGTGAAGGATGATGTGTTGCCCTTTGAGAAGAGAACACAAAAGCTCGGTGCTTCGTTGGTGTCTGGCATTATCAGTATATCAGTAGCTGTCTGTGGAACACATCAAGTGTCTTCGGCACATATGTTAGACAGTCAACAAGGAAAAGCTATATTTCAAAAAGCATGT
ATCGGATGCCATTATGAAGGTGGCAATGTTTTGCAGCCTGGTGCAACTTTGACAGCAAGAGACCTGGAAAGGAATGGTGTGGCAACAGAAGAAAACATATTCAAAATTACATATTATGGAAAGGGTCGAATGCCAGGATTTGGTGAGAAGTGTACACCGAAGGGGCAATGCACGTTTGGTCCACGTCTTAGTGATGAAGA
TATTCATTTTCTGGCTGAGTATGTAAAGTTGCAAGCAGACCAAGGGTGGCCAAAGCTAGAACGTACATGATTATTTCAAGATTCATCAAGCACAGCCCACGGCAAGAGATAGTTCTGCACTATTTTGACTTGCTTTTTATCAGAAATATGATATATTTAAAATGATTATTTCAAGATTCATCAAGAACAGCATATTGCAA
GGGATAGTTCCTCACTTTTTGGACTAGCTTGTTATCAGAGATATGATATTCTAAGACTGATTATTTCAAGATTCATCAAGCACAGCACATTGCAAGGGATGGTTCTGCACTATATGGACTTGCTTGTTATCAGAAATATAATATACTAAAACTGAC