NA ----> NA
Intron 1 GTAATTGGAT ... ATCGTTTCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 44.09 | 26 | 30 | 11 |
| A2 | 40.98 | 18 | 19 | 6 |
| A3 | 51.58 | 23 | 34 | 15 |
| A4 | 45.76 | 16 | 19 | 8 |
| A5 | 63.64 | 4 | 9 | 5 |
| A6 | 56.76 | 16 | 27 | 15 |
| A7 | 41.79 | 39 | 35 | 21 |
| A8 | 43.33 | 34 | 27 | 25 |
| A9 | 48.84 | 22 | 23 | 19 |
| A10 | 38.46 | 20 | 6 | 19 |
>TRINITY_DN97413_c0_g1_i2 from sample A5 / Example spliced isoformAACTTGACCCATCCCCCCCCCCTGCAGAATTTGGAATGGAAGATCCGAGTTTAAGAGAACTGAAGGATTGTTATAACTGTAACAACAATATAGGTACCTCGGGCTTCACAATGTATTCACTAGGAAAGTGACAGTAAACAGGAATTAGAAGTGTAATCTAGTTGGAAGTCTGGAGTTTATCCAGGAAATCATCAGAGCTA
TCCATGATGGAGGGATTTGGAGGAGGATTGAAATGGTTTCTTTTCATCTTTGTTTTGTGCAAGTTGGCAAAGGGCACAGCCTGCAGATTTTATTTGATAAAGAGGTTTGTCTTACTTTCCTGTATAGGTGATATTGCAAAAGTTGATGTGCTGTGGCTCCAACCAAGTAGACAGAATTTAAGTTCTACACTCGGAAGAAA
TTGTACTTTTAGCATGTCGTTATTCCCAGGCTTGAAAATTCAGTTCATTGAATGGTTTTTAAAGTAATACTATGGATTTATGGAAGCAGATTGGACATTGGTTCTTTGTGAACTTGTCCTCAATACATATTGCCTTCTAGCTGGGAGTTTTAGGCTCATTGCAGATATTGTTATGCAAGACAGCCATCTGAAATGTTCTT
GTAAG
>TRINITY_DN97413_c0_g1_i1 from sample A5 / Example unspliced isoform:AACTTGACCCATCCCCCCCCCCTGCAGAATTTGGAATGGAAGATCCGAGTTTAAGAGAACTGAAGGATTGTTATAACTGTAACAACAATATAGGTACCTCGGGCTTCACAATGTATTCACTAGGAAAGTGACAGTAAACAGGAATTAGAAGTGTAATCTAGTTGGAAGTCTGGAGTTTATCCAGGAAATCATCAGAGCTA
TCCATGATGGAGGGATTTGGAGGAGGATTGAAATGGTTTCTTTTCATCTTTGTTTTGTGCAAGTTGGCAAAGGGCACAGCCTGCAGATTTTATTTGATAAAGAGGTTTGTCTTACTTTCCTGTATAGGTGATATTGCAAAAGTTGATGTGCTGTGGCTCCAACCAAGTAGACAGAATTTAAGTTCTACACTCGGAAGAAA
TTGTACTTTTAGCATGTCGTTATTCCCAGGCTTGAAAATTCAGTTCATTGAATGGTTTTTAAAGTAATACTATGGATTTATGgtaattggatgcctctttcaaaattctttccattcttgaagttatagcctaaatcatactaggtttaagaagggcaccatcctgtaaagaaagatttgattacattatttatgctgaa
gatggaccacgaactggcggtccaaactgtcgacaatttctctttgcacacagttacgccagaaaacaccaacccaaattatttgtcgttgagattcctcggtacagttttccagggattttgaatgaagttcaggcacagctttattcagactataatattagtacgagtccaactatggcaagggatgttttcaagtt
gcttatttgaacacattgaaaaaccaacatttcttgataatcaggggagcaagactgttttttattaattcattattgtacacagtgttttggagtagcaggtggctcaaaaataggttatataagatttttataattgttaaaaggaatatacttgcatccattgcaattggatgctaatatttttgtaatgtcaagct
tgtcttgaatgtcctttgctctgatcgtttcagGAAGCAGATTGGACATTGGTTCTTTGTGAACTTGTCCTCAATACATATTGCCTTCTAGCTGGGAGTTTTAGGCTCATTGCAGATATTGTTATGCAAGACAGCCATCTGAAATGTTCTTGTAAG