sp|F4IDY7|DDR4_ARATH ----> DDT domain-containing protein DDR4


Intron 1 GTAAAAATAT ... CTGTTTTAAG

SampleRetention score (%)Exon junction reads5'ss reads3'ss reads
A118.1845110
A221.053018
A312.122914
A4251234
A515.381112
A60600
A715.383306
A818.182706
A923.2633010
A1023.2633010



>TRINITY_DN111506_c0_g1_i5 from sample A2 / Example spliced isoform
CTTCATTGTAGATCATAATAGGGATTGTTTTACCCTTGATTTTTGTAAAATTAAATGGAATTGGCGCAACATTTAGGATATAGTTTGAAATTTGTAATGAATCATTTGATTTCTAAATTTTTTACAGGGCATACCACCAGTGAGCAGGACATTAGGGAATAACGTGTGGGTTACGGCACTTTGCAAGAAGCTTGCAGATT
GGTGGCCATGGGTTGCTGAAGGTGAACTTCCACTTGTTGCATGTCATGGGGAGGAGATTATAGCGTACAAAAAGCTGGATCCTTGCACTCGTGTGTTGGTTTTGAAAGCTCTTTGTGAAATTCGTCTAGAGCAAGATGACATTTGGAAGTTTATTGATGATTCATTAAAGCACAACAACTTCCAGCTTTCTAGTTTCCGC
AAAGCACGGTTAGGGGGTGATGCACATGGAACTTCATACTGGTATGATGCAGATTCCATTATTGGGCATAGATTATATAGGGAAATACAGAAAATTGAAGTTAAAATCAAGCCAAAAGGAAAGGGTCGTTCAACAGAACCTTTAGTGAGTTGTCAGTGGGAAGCCATTGCGACTAACCTTGATGAATTCCTGGCAGTATC
GGAAAAATTTGCTTCCAGTAGAAATAAGGTAGAGGCAGGGATTGGAAAGAAAATTAAGAATGATATTGTTCCTGTTCTTGAAGAACTTCAGAAGAAGAAAGAACGAGCACTGAAAAAACAGCAGAGGCAAGCCACACTTCTAGATAGCTTTTTTGTTGCACAAGGAGAGGCTATTGGTCGTTCCCGTCGTGACCGCAAAC
CTGTTAAGTACACATTTGATGATTACGACCGTTCTATTGATGAGGCAATACAAATGACAAAGAAGATTTGGCCATCTTCGGATCAGATTTTGAAAAGGCATATGGCAATGGATGAACATCCTGAAGCAAATGGTAATGAAAACGGTCATGGTAACAACCCTGAAAATAGATTATCGCCAGAGTCAAAAGATGGGAGTGAA
GAATCTAATGTGCTCCGCACATCTGGTCCTTCCACACGCAGCACTAGGTTGAGACCTACAGCTCAAAGAAGCATGGAAAGGAAATATATGGAAGATGCTTCTGACAATGATGTTGGCAGCAAGGATGAAATGTCTGTGGATGCAGTAACTGATGGAGGCATAAAAAGTAAAAAGAGTATAAGCATACCCAGTAGTTCAGA
TGGCGAGGATGGAAGCAGAGAGGATGCAGATGGCGACGACGAGTACAGAGAGGATGACGGTGATGAAGAGTACAGAGAGGATGACGGTGATGAAGAGTACAGAGAGGATGAAGAGGATGTAGAAGATGACGATGATAACATTGATGATGAGAGTGTTAAGGATGATATTAGTGATAGTCCCCGCCGAAGAAAGCGTTCGA
GTCGAAGGAAAAGGAGCTGGAGACCCGATGACATTGAAGATGTAAGCATTAGTGATGATGATGACGACGAGGACGATGATGATGATAGTGGCGACAAAAGAAAGTATCCAACTCGAGGAAAGAGGCGGGGAAAACCTGTAGTTGAACATCAATCAGGTTTGCGAAGAAGCAAGAGAGCCACTCGTGTGGATTATAGCCAA
TATGAGATGTCTAATTCCGAGGAAGAAAATTTGGAATCCGAGAGGCAATCAAAACCAAATGTCAAGAAAAAAATGTCTAAAATGGAGTCAGATGTAAGTAACAGTTCCCACTCTGACATGAAAGTTGAAAGTTCTCTAGATGATGACTCAGACCAAGCTAGAGATGAAAAGCAGCTCATTACTGAAGATGCCCAGTCACG
TGAAGCTTCCAAAGAAGAGCCTATCTTAAGGCCTTGGGAACAGTTTGGAGAACAATCGCTAGATTTAAAGAGCCGGCACTTTATTGACCTAAATGAGGCAGCTCCACTCACAGGCTTTGATGACATTGTCTTAAACAACAGTACAAAACAGATAGTACCTGAGGATTCCATATCCAAGCAAGTCCGAAACAATGAGAATG
ATGATCGTTACTGATCATTTTCTTGCACAGGAGTACAGAGATGCAGTCATTTGTGGGGGGGAACATATTTTCATTTTCTTCATTATTTTGGACTTCTTTTTCACATGGTATCAGTCAGTTATCATTAATACAGGGTTCCAACTCAAGGTTAGAGTGTAGATCTGTCAATTTCTAAGATCAACTGTACAATATTCTTAGAT
TGTGTCAAATGCTGCTAAATTTACTCATTGTATGAGTTTTTTGCAGCGGGACGCTAGCTTTTCATTCTAATTGTAATTTATTTATAGAAAAATTTCTCGATCTTATATATATCCTGATTCAGTGCGGAGAAAGATGGTGCATGGAATTGAGCAAACTCAATTATAAAACATATCATATGTTTGGACTTCCCTGTACTGGA
TTGATTCAGAACATGTGCGTAAGCGAATATAACATAAAAGCATTATAGCATAAAGTAAGGATATACACTATAAGTTGTGTGCACATAACATATATGGTAAGATGAATTTTGTAAACAGAAGTGGTCAGTGGGTTGTGTTCTGAATTATTTAATTCAGTGTAGGTTCATGTATGAATTTTCTGAATTATTTGCCAAGAATG
GTGATGCCAATGGATATATCCCTTGTTCTCAAT


>TRINITY_DN111506_c0_g1_i6 from sample A2 / Example unspliced isoform:
GCACATGGAACTTCATACTGgtaaaaatatgcaactagacatttggttggttaatcttgattcttttgttatcttgatatcattaaagatcattttaagaatgatcatctttggttatgttttatgaatgattatattctcatctatgttttcagacccttttgaatatttttatttagatactattacagaatccatgg
ctcatatctgatttttcagtttctgttttaag
GTATGATGCAGATTCCATTATTGGGCATAGATTATATAGGGAAATACAGAAAATTGAAGTTAAAATCAAGCCAAAAGGAAAGGGTCGTTCAACAGAACCTTTAGTGAGTTGTCAGTGGGAAGCCATTGCGACTAACCTTGATGAATTCCTGGCAGTATCGGAAAAATT
TGCTTCCAGTAGAAATAAGGTAGAGGCAGGGATTGGAAAGAAAATTAAGAATGATATTGTTCCTGTTCTTGAAGAACTTCAGAAGAAGAAAGAACGAGCACTGAAAAAACAGCAGAGGCAAGCCACACTTCTAGATAGCTTTTTTGTTGCACAAGGAGAGGCTATTGGTCGTTCCCGTCGTGACCGCAAACCTGTTAAGT
ACACATTTGATGATTACGACCGTTCTATTGATGAGGCAATACAAATGACAAAGAAGATTTGGCCATCTTCGGATCAGATTTTGAAAAGGCATATGGCAATGGATGAACATCCTGAAGCAAATGGTAATGAAAACGGTCATGGTAACAACCCTGAAAATAGATTATCGCCAGAGTCAAAAGATGGGAGTGAAGAATCTAAT
GTGCTCCGCACATCTGGTCCTTCCACACGCAGCACTAGGTTGAGACCTACAGCTCAAAGAAGCATGGAAAGGAAATATATGGAAGATGCTTCTGACAATGATGTTGGCAGCAAGGATGAAATGTCTGTGGATGCAGTAACTGATGGAGGCATAAAAAGTAAAAAGAGTATAAGCATACCCAGTAGTTCAGATGGCGAGGA
TGGAAGCAGAGAGGATGCAGATGGCGACGACGAGTACAGAGAGGATGACGGTGATGAAGAGTACAGAGAGGATGACGGTGATGAAGAGTACAGAGAGGATGAAGAGGATGTAGAAGATGACGATGATAACATTGATGATGAGAGTGTTAAGGATGATATTAGTGATAGTCCCCGCCGAAGAAAGCGTTCGAGTCGAAGGA
AAAGGAGCTGGAGACCCGATGACATTGAAGATGTAAGCATTAGTGATGATGATGACGACGAGGACGATGATGATGATAGTGGCGACAAAAGAAAGTATCCAACTCGAGGAAAGAGGCGGGGAAAACCTGTAGTTGAACATCAATCAGGTTTGCGAAGAAGCAAGAGAGCCACTCGTGTGGATTATAGCCAATATGAGATG
TCTAATTCCGAGGAAGAAAATTTGGAATCCGAGAGGCAATCAAAACCAAATGTCAAGAAAAAAATGTCTAAAATGGAGTCAGATGTAAGTAACAGTTCCCACTCTGACATGAAAGTTGAAAGTTCTCTAGATGATGACTCAGACCAAGCTAGAGATGAAAAGCAGCTCATTACTGAAGATGCCCAGTCACGTGAAGCTTC
CAAAGAAGAGCCTATCTTAAGGCCTTGGGAACAGTTTGGAGAACAATCGCTAGATTTAAAGAGCCGGCACTTTATTGACCTAAATGAGGCAGCTCCACTCACAGGCTTTGATGACATTGTCTTAAACAACAGTACAAAACAGATAGTACCTGAGGATTCCATATCCAAGCAAGTCCGAAACAATGAGAATGATGATCGTT
ACTGATCATTTTCTTGCACAGGAGTACAGAGATGCAGTCATTTGTGGGGGGGAACATATTTTCATTTTCTTCATTATTTTGGACTTCTTTTTCACATGGTATCAGTCAGTTATCATTAATACAGGGTTCCAACTCAAGGTTAGAGTGTAGATCTGTCAATTTCTAAGATCAACTGTACAATATTCTTAGATTGTGTCAAA
TGCTGCTAAATTTACTCATTGTATGAGTTTTTTGCAGCGGGACGCTAGCTTTTCATTCTAATTGTAATTTATTTATAGAAAAATTTCTCGATCTTATATATATCCTGATTCAGTGCGGAGAAAGATGGTGCATGGAATTGAGCAAACTCAATTATAAAACATATCATATGTTTGGACTTCCCTGTACTGGATTGATTCAG
AACATGTGCGTAAGCGAATATAACATAAAAGCATTATAGCATAAAGTAAGGATATACACTATAAGTTGTGTGCACATAACATATATGGTAAGATGAATTTTGTAAACAGAAGTGGTCAGTGGGTTGTGTTCTGAATTATTTAATTCAGTGTAGGTTCATGTATGAATTTTCTGAATTATTTGCCAAGAATGGTGATGCCA
ATGGATATATCCCTTGTTCTCAAT




Intron 2 GTTTGTAATT ... TTACTAACAG

SampleRetention score (%)Exon junction reads5'ss reads3'ss reads
A133.5344.62718
A226.2343.6823
A324381410
A433.7610.838
A540.489.649
A623.08512
A720.0487.82222
A815.5748.8612
A916.79571211
A1015.3247710



>TRINITY_DN111506_c0_g1_i5 from sample A2 / Example spliced isoform
CTTCATTGTAGATCATAATAGGGATTGTTTTACCCTTGATTTTTGTAAAATTAAATGGAATTGGCGCAACATTTAGGATATAGTTTGAAATTTGTAATGAATCATTTGATTTCTAAATTTTTTACAGGGCATACCACCAGTGAGCAGGACATTAGGGAATAACGTGTGGGTTACGGCACTTTGCAAGAAGCTTGCAGATT
GGTGGCCATGGGTTGCTGAAGGTGAACTTCCACTTGTTGCATGTCATGGGGAGGAGATTATAGCGTACAAAAAGCTGGATCCTTGCACTCGTGTGTTGGTTTTGAAAGCTCTTTGTGAAATTCGTCTAGAGCAAGATGACATTTGGAAGTTTATTGATGATTCATTAAAGCACAACAACTTCCAGCTTTCTAGTTTCCGC
AAAGCACGGTTAGGGGGTGATGCACATGGAACTTCATACTGGTATGATGCAGATTCCATTATTGGGCATAGATTATATAGGGAAATACAGAAAATTGAAGTTAAAATCAAGCCAAAAGGAAAGGGTCGTTCAACAGAACCTTTAGTGAGTTGTCAGTGGGAAGCCATTGCGACTAACCTTGATGAATTCCTGGCAGTATC
GGAAAAATTTGCTTCCAGTAGAAATAAGGTAGAGGCAGGGATTGGAAAGAAAATTAAGAATGATATTGTTCCTGTTCTTGAAGAACTTCAGAAGAAGAAAGAACGAGCACTGAAAAAACAGCAGAGGCAAGCCACACTTCTAGATAGCTTTTTTGTTGCACAAGGAGAGGCTATTGGTCGTTCCCGTCGTGACCGCAAAC
CTGTTAAGTACACATTTGATGATTACGACCGTTCTATTGATGAGGCAATACAAATGACAAAGAAGATTTGGCCATCTTCGGATCAGATTTTGAAAAGGCATATGGCAATGGATGAACATCCTGAAGCAAATGGTAATGAAAACGGTCATGGTAACAACCCTGAAAATAGATTATCGCCAGAGTCAAAAGATGGGAGTGAA
GAATCTAATGTGCTCCGCACATCTGGTCCTTCCACACGCAGCACTAGGTTGAGACCTACAGCTCAAAGAAGCATGGAAAGGAAATATATGGAAGATGCTTCTGACAATGATGTTGGCAGCAAGGATGAAATGTCTGTGGATGCAGTAACTGATGGAGGCATAAAAAGTAAAAAGAGTATAAGCATACCCAGTAGTTCAGA
TGGCGAGGATGGAAGCAGAGAGGATGCAGATGGCGACGACGAGTACAGAGAGGATGACGGTGATGAAGAGTACAGAGAGGATGACGGTGATGAAGAGTACAGAGAGGATGAAGAGGATGTAGAAGATGACGATGATAACATTGATGATGAGAGTGTTAAGGATGATATTAGTGATAGTCCCCGCCGAAGAAAGCGTTCGA
GTCGAAGGAAAAGGAGCTGGAGACCCGATGACATTGAAGATGTAAGCATTAGTGATGATGATGACGACGAGGACGATGATGATGATAGTGGCGACAAAAGAAAGTATCCAACTCGAGGAAAGAGGCGGGGAAAACCTGTAGTTGAACATCAATCAGGTTTGCGAAGAAGCAAGAGAGCCACTCGTGTGGATTATAGCCAA
TATGAGATGTCTAATTCCGAGGAAGAAAATTTGGAATCCGAGAGGCAATCAAAACCAAATGTCAAGAAAAAAATGTCTAAAATGGAGTCAGATGTAAGTAACAGTTCCCACTCTGACATGAAAGTTGAAAGTTCTCTAGATGATGACTCAGACCAAGCTAGAGATGAAAAGCAGCTCATTACTGAAGATGCCCAGTCACG
TGAAGCTTCCAAAGAAGAGCCTATCTTAAGGCCTTGGGAACAGTTTGGAGAACAATCGCTAGATTTAAAGAGCCGGCACTTTATTGACCTAAATGAGGCAGCTCCACTCACAGGCTTTGATGACATTGTCTTAAACAACAGTACAAAACAGATAGTACCTGAGGATTCCATATCCAAGCAAGTCCGAAACAATGAGAATG
ATGATCGTTACTGATCATTTTCTTGCACAGGAGTACAGAGATGCAGTCATTTGTGGGGGGGAACATATTTTCATTTTCTTCATTATTTTGGACTTCTTTTTCACATGGTATCAGTCAGTTATCATTAATACAGGGTTCCAACTCAAGGTTAGAGTGTAGATCTGTCAATTTCTAAGATCAACTGTACAATATTCTTAGAT
TGTGTCAAATGCTGCTAAATTTACTCATTGTATGAGTTTTTTGCAGCGGGACGCTAGCTTTTCATTCTAATTGTAATTTATTTATAGAAAAATTTCTCGATCTTATATATATCCTGATTCAGTGCGGAGAAAGATGGTGCATGGAATTGAGCAAACTCAATTATAAAACATATCATATGTTTGGACTTCCCTGTACTGGA
TTGATTCAGAACATGTGCGTAAGCGAATATAACATAAAAGCATTATAGCATAAAGTAAGGATATACACTATAAGTTGTGTGCACATAACATATATGGTAAGATGAATTTTGTAAACAGAAGTGGTCAGTGGGTTGTGTTCTGAATTATTTAATTCAGTGTAGGTTCATGTATGAATTTTCTGAATTATTTGCCAAGAATG
GTGATGCCAATGGATATATCCCTTGTTCTCAAT


>TRINITY_DN111506_c0_g1_i3 from sample A2 / Example unspliced isoform:
GGTATGATGCAGATTCCATTATTGGGCATAGATTATATAGGGAAATACAGAAAATTGAAGTTAAAATCAAGCCAAAAGGAAAGGGTCGTTCAACAGAACCTTTAGTGAGTTGTCAGTGGGAAGCCATTGCGACTAACCTTGATGAATTCCTGGCAGTATCGGAAAAATTTGCTTCCAGTAGAAATAAGGTAGAGGCAGGG
ATTGGAAAGAAAATTAAGAATGATATTGTTCCTGTTCTTGAAGAACTTCAGAAGgtttgtaattctcagcgtattcaagatgagtgcaaaaacagtaatcagtaaaaggggcaaggggtcaaaattcataattactcattctttaatcaagatttatctgcgtaatacatatctatttattttggtttaacttgtccagg
gagatagaggatgtcatacttcaattttatggtttattgactgtcattatctgcaatatttaagaagcctgaatctatggttacttttaatttatttgttgtgaggagtcctcatatgtctaatccaaaattcgtgtctttacgagatgtgtggcttaagatctttttcttatactgtcattactaacag
AAGAAAGAAC
GAGCACTGAAAAAACAGCAGAGGCAAGCCACACTTCTAGATAGCTTTTTTGTTGCACAAGGAGAGGCTATTGGTCGTTCCCGTCGTGACCGCAAACCTGTTAAGTACACATTTGATGATTACGACCGTTCTATTGATGAGGCAATACAAATGACAAAGTAAGTACTCCCAAATGAATAGAGTTCAAGTTTATTTTAATGT
ATTTCTATCTTTTTAGTGCTTTTAATTGTTTCACCTTTTGCTTGATGTGTCCATTTTGGAATTTCAGTTTGTTTGGGTTATTTATTGGAAGAAATGATTGAGAGTATAATCATTAAGAAG




Intron 3 GTAGGCAGTT ... TTCAATGCAG

SampleRetention score (%)Exon junction reads5'ss reads3'ss reads
A117.49265.56
A222.6834812
A322.794410.515.5
A422.9129116.5
A532.261687.5
A660.1162623
A738.59403023
A846.772729.524
A950.39242428
A1048.93742.532.5



>TRINITY_DN114763_c1_g4_i6 from sample A3 / Example spliced isoform
TTTAGAGTTGCAAGCCCAGACTTGTTAACAACCAAGGAGAGATTCTTCCACTTGTTAAATTGATGGTTAGAGTCGCAAGACAAGACTTCCATTAACTTGGATGAGTGAAGAGCGTACCCTGCTAGTGAACGGAGGTAGAGAACTTCATGAATATATTGCCAGAAACCTATGGTTCTCCATACGGAAAGCTAAGGATTTAT
TTACTATTGCAGACCGACAGCCAAACCAATAACCCAGGGTTTGGTTTGCTGGCTAACTAACCCTGGTTAGCCAGTATTATTTGTTCCCGCGGCGTCCTTCCATATATATATTCACTGCTGCATATGTTCTGTTGTTCTTCTGCTACGCAAAACGCGCATTTTTTGGCTCAAAATCTCTGCAAACCATTGGCCGATGAGGG
TTTTATACTCCGTTGAATTTGCCCAAGGTCTCTTGAACGTTTTGTGTTGCTGATAAATCTATGTTCGAATCCTGTGCCCGTGCACATCTGTGAAAATTTGTGGGGGGGTTTAACTTTTTCCTCCTCCCCCACTGCAATCTTCAGGGTTTCATAGAATCTCCGTGGGGGAGGAGGTCGCTGGAATGTCCGAAAGGGTAAGC
GGGAGGCCCCCAAAAGATCCAGAAATGGAAAAGAGCGAAGCCGAGGAGGAACAAAAAAGGAGCCGAGGAAGGCCCAAGCGATATCCCGATAGAGAAATTCTGACTGCAAAGGAAGAAGATCCGGAGACAGTTAAAGGTACAGGGAGGCCTCGGAGAATCCTACCTTCAGCTAAAATCTCACAGAGCCATGTAAAAGCCGA
GGGTTCTGAACATACGACTGCCAGTGCGTTGCCAGCAGCAGCCGGCGAGCAGGACGTGGTGATTTCGTCTCCGCCCGATCCGCAGAAGGAGCGAGGGCGCATACGCAACATGTTGGAGTTGGCGTCCGTGCTGAATTTTATACACGTTTTTAGACCCGTACTGAATATAAATACGGAGTTTTCAGCGGAGGAACTCGAAA
CTGCGCTGATTACGCCTAATAATACTCTGAGTCAGCTGCATATACAGCTTCTGAAGGGCATACCACCAGTGAGCAGGACATTAGGGAATAACGTGTGGGTTACGGCACTTTGCAAGAAGCTTGCAGATTGGTGGCCATGGGTTGCTGAAGGTGAACTTCCACTTGTTGCATGTCATGGGGAGGAGATTATAGCGTACAAA
AAGCTGGATCCTTGCACTCGTGTGTTGGTTTTGAAAGCTCTTTGTGAAATTCGTCTAGAGCAAGATGACATTTGGAAGTTTATTGATGATTCATTAAAGCACAACAACTTCCAGCTTTCTAGTTTCCGCAAAGCACGGTTAGGGGGTGATGCACATGGAACTTCATACTGGTATGATGCAGATTCCATTATTGGGCATAG
ATTATATAGGGAAATACAGAAAATTGAAGTTAAAATCAAGCCAAAAGGAAAGGGTCGTTCAACAGAACCTTTAGTGAGTTGTCAGTGGGAAGCCATTGCGACTAACCTTGATGAATTCCTGGCAGTATCGGTATGTAGCTGGAAAAAATTGACCATTTTA


>TRINITY_DN114763_c1_g4_i9 from sample A3 / Example unspliced isoform:
ATTGTGGCCTATTAGTGCTTAATCATCTCATTTGCGTTTTATATGCAGGTTGCTGAAGGTGAACTTCCACTTGTTGCATGTCATGGgtaggcagttcgatcctggaataaatcattttcattctttacgtggggtgaaatagtgatacaattgcatgttttcaatgcagGGAGGAGATTATAGCGTACAAAAAGCTGGAT
CCTTGCACTCGTGTGTTGGTTTTGAAAGCTCTTTGTGAAATTCGTCTAGAGCAAGATGACATTTGGAAGTTTATTGATGATTCATTAAAGCACAACAACTTCCAGCTTTCTAGTTTCCGCAAAGCACGGTTAGGGGGTGATGCACATGGAACTTCATACTGGTATGATGCAGATTCCATTATTGGGCATAGATTATATAG
GGAAATACAGAAAATTGAAGTTAAAATCAAGCCAAAAGGAAAGGGTCGTTCAACAGAACCTTTAGTGAGTTGTCAGTGGGAAGCCATTGCGACTAACCTTGATGAATTCCTGGCAGTATCGATGATTACGACCGTTCTAT