NA ----> NA
Intron 1 GTGAGTGCAG ... TAGTCTCAAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 100 | 0 | 18 | 12 |
| A2 | 84.62 | 1 | 5 | 6 |
| A3 | 70 | 3 | 8 | 6 |
| A4 | 100 | 0 | 10 | 14 |
| A5 | 100 | 0 | 6 | 6 |
| A6 | 45.45 | 3 | 2 | 3 |
| A7 | 70.37 | 4 | 2 | 17 |
| A8 | 54.29 | 8 | 8 | 11 |
| A9 | 37.93 | 9 | 2 | 9 |
| A10 | 78.95 | 2 | 7 | 8 |
>TRINITY_DN32863_c0_g1_i2 from sample A6 / Example spliced isoformAGATGAACGACGAGCGTTGAGCGGAGAGCGGAGTGCAGAATTTAGTTGCGAGCGACTGCAATCTAAAACAATGGCGCCTCTTTTTGTATGAGCATGGGCAGCAAAGAAGATAGGAAGAGGCAGAGGCAGAGGCCGAGGCAAGGCAAGGCAGAGCTGCATGGCTAAAGGTAGAGGCAGATTTATATTCAGAAGCAGATTCG
GATTCATAGGCAGAGGCAGAGCAATCTTTTATTATGAAAGGTTGTCCAAGATCCTATCAGCGGAAGACAGAGCCATCTTCTCCAATTCATGCCATGCCTGCCCTTCTGTCATTCCTTTATGATCGCTCCTGGGTAATCGGACGCAGGTTGTATCAAATTTCTTGAAGGTTGTGTTAATTTCTTAGAGGTTCAAACCGCGA
GTGATGCTGTTGTGATTGAGGTGATTTTAACGGTACAAAGATTTCTTTCCACAGACGGCGCCAATTGTTTTTCGTTTTGTGGAGGATTTTAGTTATGTAGAGGGTTTTCAACCAGGGTTTTATATCAGGTAGATAGGATACCAACGCATTTCAATCAAGATTGATTAAGATGAATGGCCCCAAGCAAAGCATTCTTTTGG
CACTAAGGTTTGTTGACATGATGGAGAGAATTTTTTGTGATGCTCGGATAATATTATGTTTTGTAATTGATATTGATAAGAATAATGGGATAACTATCTCTTTATTGAGACATGAGCCATAAATGATGTAAAGGGATGTAAAAGGATCTATTTACGAGTAGAAACGGA
>TRINITY_DN32863_c0_g1_i1 from sample A6 / Example unspliced isoform:AGATGAACGACGAGCGTTGAGCGGAGAGCGGAGTGCAGAATTTAgtgagtgcaggttttatagtcagttttctgtctgtttctatgtgttttcagttctttgcagcatggccatgcgcaattgttgtttttcttttctttggatttgttttcttttttcttttttccttttttttcatcatttttagtctcaagGTTGCG
AGCGACTGCAATCTAAAACAATGGCGCCTCTTTTTGTATGAGCATGGGCAGCAAAGAAGATAGGAAGAGGCAGAGGCAGAGGCCGAGGCAAGGCAAGGCAGAGCTGCATGGCTAAAGGTAGAGGCAGATTTATATTCAGAAGCAGATTCGGATTCATAGGCAGAGGCAGAGCAATCTTTTATTATGAAAGGTTGTCCAAG
ATCCTATCAGCGGAAGACAGAGCCATCTTCTCCAATTCATGCCATGCCTGCCCTTCTGTCATTCCTTTATGATCGCTCCTGGGTAATCGGACGCAGGTTGTATCAAATTTCTTGAAGGTTGTGTTAATTTCTTAGAGGTTCAAACCGCGAGTGATGCTGTTGTGATTGAGGTGATTTTAACGGTACAAAGATTTCTTTCC
ACAGACGGCGCCAATTGTTTTTCGTTTTGTGGAGGATTTTAGTTATGTAGAGGGTTTTCAACCAGGGTTTTATATCAGGTAGATAGGATACCAACGCATTTCAATCAAGATTGATTAAGATGAATGGCCCCAAGCAAAGCATTCTTTTGGCACTAAGGTTTGTTGACATGATGGAGAGAATTTTTTGTGATGCTCGGATA
ATATTATGTTTTGTAATTGATATTGATAAGAATAATGGGATAACTATCTCTTTATTGAGACATGAGCCATAAATGATGTAAAGGGATGTAAAAGGATCTATTTACGAGTAGAAACGGA