NA ----> NA
Intron 1 GTAAATTCTA ... TTGTATGTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 26.09 | 17 | 1.5 | 6 |
| A2 | 18.18 | 27 | 1 | 6 |
| A3 | 12.9 | 27 | 4.5 | 4 |
| A4 | 29.8 | 20 | 3 | 8.5 |
| A5 | 12.5 | 21 | 2.5 | 3 |
| A6 | 14.29 | 57 | 8.5 | 9.5 |
| A7 | 23.3 | 79 | 15 | 24 |
| A8 | 32.1 | 55 | 3.5 | 26 |
| A9 | 22.81 | 88 | 9.5 | 26 |
| A10 | 26.61 | 91 | 10.5 | 33 |
>TRINITY_DN46701_c2_g1_i1 from sample A7 / Example spliced isoformACGTGATAAGACATGGAACGACGACCGCAGGCGGATTCTATAAATTATTAGAAAATTTAACAAAAACATCCAACTGATTTTTAAATTTTAATTCGCTAGGTACTTGTGCATTTCCAGCACGTCAGGACTCGGTAAAAAATTTTCGGACAGGTCAATGAATTAACTGGGTAGTACACAACCGAGGCACGGCGTTGAATAGA
CAATAACGTTTGTGACTTGAATTCTATTCTAGTAATCCCGAATTCCTGCCCTCTTAGTCGCTAATTTCTACGCAGAACATGAAGAATCCACTTCAGGGCACAATTTCTCCGAAGAACAAGACTGATTTTTCCTTTCTTGTCTGAAAATTGATAAAAGAATTCGTTAAGCTCATGGAGAACTGATCAGACAGAAGATGAAG
AGCCGAATTACAGTTGGTTTTGGCTCCGTGCTGTTGGCTTTGCTGATTATACTCGGCCCCGTCTTCTTTATCAAGGAGTGGTCTGATGGCCTCTGGGAAGAACGATGGATTGCGGCCAAAAATCTGTTTCGGGCAGATCAAAATGCGTTAGCGAATAACGTCGGGCAGAGAATAGTCCGCACCAAAGAACTTATACAGTG
CGCGCCCAGCACAGCTTGTTCGACATCACGGTTTCCCAGTACCGGACAGCCAAGCTTTAATGGAAGTGAAAACGGGTCCGCCGCGGCCTGCCCGCTCTACTTTAATTGGATTCGCCAGGACTTGAAGCCATGGGCAAAGACTGGAATTACTTTGGACATGGTTGAAGCCGCAAAGAGCAAAGCCTCATTTAGGCTGACAA
TTGTTGATGGCAGAGTGTATATTGAAACATACAGAAAATCTTTTCAGACCAGAGATAAGTTTACCTTCTGGGGAATTACCCAGCTCATGAAATTCTATCCCGGAATGCTTCCAGACTTGGACTTGATGTTCAATTGTGATGACAGGCCCGTTATCGGTCGTGCCGGATTTAAAGATCCGGCCAAGCCGCCTCCCGCTCTG
TTTCATTATTGCGGGAGCGAAGATACATTCGATATTGCGTTTCCAGATTGGTCTTTCTGGGGATGGCCGGAGATAATGACACCACCATGGAAACCGTTAGTGGAGGATATCCAGATTGGCAGCCAAAAAGTCAAATGGGAGGACAGAGCTCCCACGGCCTACTGGAAAGGCAATCTCTATACAGGATGGAGACAGGAACT
TTTGAAATGCACCAAAACGCCCCACTGGAACGGTCGTGTTTATAATCAGGACTGGGGTAAAGAAGGGAGACAAGGGTTCCGAGAATCCAAGCTCGCAGACCAGTGTGACCACAGATACAAGATATTCATCGAAGGAAACGCGTGGTCAGTGAGCCTGAAGAATATTTTAGCCTGTGATTCCACAACTCTTTTGATAACAC
CAAAATTCCATGACTTCTTTCTTAGAGGACTTGTTCCTCAACGACATTACTGGCCTATAAGAGCCGAGAAACTGTGCGAATCCATCCAGTTTGCTGTAAACTGGGGAAACAAGCACAAAAAGGAGGCAAAGGAGATTGGAAAGGCAGCGAAAGAATTTATTCAGAATGAATTGAAAATGTCGAATGTATACGATTACATG
TTCCATATTCTAAACGAGTATTCGAAGCTACTAAAGTATAAACCATCTGTTCCGACAAAGGCAACCGAATACTGTTCAGAAACTTTATTTTGCTTTGCTAATAAAGTGGAGCAAGAGTATATGCAGGAATCAATGGCCACCACCGCGAGTTCTACGCCGCCATGTAAACTAGACGACCTGGAATCCGAAGAGAAATATGT
CAAGGAATTCCTCCAATGGAAAGCCACGACAATGGCTACTGTCAAGTACTTGGAAGAATCGGCGAAATGACGATAATCATGTGTTTGCTCAGGAATAACATCTATGCAATTTTTATTGGTAAAGATCGTGATTTTGGGTTATTTTACCGTGATCAGGATAACCATCAGAGAGTAGACAAATTTTTTTTTTCTGAAGCATT
CACGATGTTACACATATTTGTTCACGAATATGGAGCCCTATGATGGCTATGGATATGTATTACATGATTTAATTTGACAGGCTTGGAGTTATTCAAATCTCATGCTAGGTACAGAATATGTGGACAGAATCATTGCTCACATGATTTTTAGAATATGTGGACAGAATCATTGCTCACATGATTTTTAGAATATGTGGACA
GAATCATTG
>TRINITY_DN46701_c2_g1_i3 from sample A7 / Example unspliced isoform:ACGTGATAAGACATGGAACGACGACCGCAGGCGGATTCTATAAATTATTAGAAAATTTAACAAAAACATCCAACTGATTTTTAAATTTTAATTCGCTAGGTACTTGTGCATTTCCAGCACGTCAGGACTCGGTAAAAAATTTTCGGACAGGTCAATGAATTAACTGGGTAGTACACAACCGAGGCACGGCGTTGAATAGA
CAATAACGTTTGTGACTTGAATTCTATTCTAGTAATCCCGAATTCCTGCCCTCTTAGTCGCTAATTTCTACGCAGAACATGAAGAATCCACTTCAGGGCACAATTTCTCCGAAGAACAAGACTGATTTTTCCTTTCTTGTCTGAAAATTGATAAAAGAATTCGTTAAGCTCATGGAGAACTGATCAGACAGAAGATGAAG
AGCCGAATTACAGTTGGTTTTGGCTCCGTGCTGTTGGCTTTGCTGATTATACTCGGCCCCGTCTTCTTTATCAAGGAGTGGTCTGATGGCCTCTGGGAAGAACGATGGATTGCGGCCAAAAATCTGTTTCGGGCAGATCAAAATGCGTTAGCGAATAACGTCGGGCAGAGAATAGTCCGCACCAAAGAACTTATACAGTG
CGCGCCCAGCACAGCTTGTTCGACATCACGGTTTCCCAGTACCGGACAGCCAAGCTTTAATGGAAGTGAAAACGGGTCCGCCGCGGCCTGCCCGCTCTACTTTAATTGGATTCGCCAGGACTTGAAGCCATGGGCAAAGACTGGAATTACTTTGGACATGGTTGAAGCCGCAAAGAGCAAAGCCTCATTTAGGCTGACAA
TTGTTGATGGCAGAGTGTATATTGAAACATACAGAAAATCTTTTCAGACCAGAGATAAGTTTACCTTCTGGGGAATTACCCAGCTCATGAAATTCTATCCCGGAATGCTTCCAGACTTGGACTTGATGTTCAATTGTGATGACAGGCCCGTTATCGGTCGTGCCGGATTTAAAGATCCGGCCAAGCCGCCTCCCGCTCTG
TTTCATTATTGCGGGAGCGAAGATACATTCGATATTGCGTTTCCAGATTGGTCTTTCTGGGGATGGCCGGAGATAATGACACCACCATGGAAACCGTTAGTGGAGGATATCCAGATTGGCAGCCAAAAAGTCAAATGGGAGGACAGAGCTCCCACGGCCTACTGGAAAGGCAATCTCTATACAGGATGGAGACAGGAACT
TTTGAAATGCACCAAAACGCCCCACTGGAACGGTCGTGTTTATAATCAGgtaaattctatatagattcagaaggctaccgaacagatttatgtaaattttcaagtttttatgtatgttattattgtatgtagGACTGGGGTAAAGAAGGGAGACAAGGGTTCCGAGAATCCAAGCTCGCAGACCAGTGTGACCACAGATA
CAAGATATTCATCGAAGGAAACGCGTGGTCAGTGAGCCTGAAGAATATTTTAGCCTGTGATTCCACAACTCTTTTGATAACACCAAAATTCCATGACTTCTTTCTTAGAGGACTTGTTCCTCAACGACATTACTGGCCTATAAGAGCCGAGAAACTGTGCGAATCCATCCAGTTTGCTGTAAACTGGGGAAACAAGCACA
AAAAGGAGGCAAAGGAGATTGGAAAGGCAGCGAAAGAATTTATTCAGAATGAATTGAAAATGTCGAATGTATACGATTACATGTTCCATATTCTAAACGAGTATTCGAAGCTACTAAAGTATAAACCATCTGTTCCGACAAAGGCAACCGAATACTGTTCAGAAACTTTATTTTGCTTTGCTAATAAAGTGGAGCAAGAG
TATATGCAGGAATCAATGGCCACCACCGCGAGTTCTACGCCGCCATGTAAACTAGACGACCTGGAATCCGAAGAGAAATATGTCAAGGAATTCCTCCAATGGAAAGCCACGACAATGGCTACTGTCAAGTACTTGGAAGAATCGGCGAAATGACGATAATCATGTGTTTGCTCAGGAATAACATCTATGCAATTTTTATT
GGTAAAGATCGTGATTTTGGGTTATTTTACCGTGATCAGGATAACCATCAGAGAGTAGACAAATTTTTTTTTTCTGAAGCATTCACGATGTTACACATATTTGTTCACGAATATGGAGCCCTATGATGGCTATGGATATGTATTACATGATTTAATTTGACAGGCTTGGAGTTATTCAAATCTCATGCTAGGTACAGAAT
ATGTGGACAGAATCATTGCTCACATGATTTTTAGAATATGTGGACAGAATCATTGCTCACATGATTTTTAGAATATGTGGACAGAATCATTG