sp|Q402F4|TOM1_TOBAC ----> Tobamovirus multiplication protein 1
Intron 1 GTCAAATAAA ... TAAATAGTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 25.23 | 41.5 | 13 | 15 |
| A2 | 49.21 | 16 | 18 | 13 |
| A3 | 29.56 | 30 | 15 | 10 |
| A4 | 24.16 | 19 | 5 | 7 |
| A5 | 22.48 | 22.5 | 8 | 5 |
| A6 | 14.29 | 3 | 1 | 0 |
| A7 | 15.87 | 24 | 7 | 2 |
| A8 | 21.74 | 9 | 2 | 3 |
| A9 | 6.39 | 9 | 1 | 0 |
| A10 | 25.11 | 16.5 | 3 | 8 |
>TRINITY_DN40138_c1_g3_i3 from sample A8 / Example spliced isoformAGGGGCTTGGTGCAGGCGACAAATCTTAGATTTTGGGTTCTCTGAGTTAGAAGAGCTGCCAGGTATGGAAACATTGGTACCTTCGGAGGGGTTGTAGGTGAATGGGTGTGTGAAGCTGCAGAGCATTGGTACCTGTCAGATGGGAATGCATAGAAAATTTATTTTAAAGGAAAGTAGTGAAGGCATGCAGGGGCTGAACA
CTAAAGATTATGGCCAACGATAAAGGCATTTTGCTAATTGAAAAAGGCAGAGTTAACTTATCTCAAATTGTGGGATCCTTAACTAAAAATGGGGATATTTAGGTCAAAGGGTTCTTGTTAAAGAAAAGGATTTAAAATAGGCTTATCGTGAAGATTGGGTCTTATGGATGTGGGGAAAAGCTCCCTTGTTGAAGGTTTCT
TCATTGCATAGATAAGATCAGACAATTTTATGAGTAGCCAACTAGTGACCACAGTAGTAGGTCAATGGGACACAAAAAGAGACCAGAAGGAAAAAAAGAGATGTAGCCAGTGGAGAACGTTTGGTTCCATATACTCAGGTACAAATTATTCGCATTCAATTACGAGTTCCAGAATATGGCTGGAGAACTCAAAAGGTTTT
CCATCTCATGAACTTTATTGTCAATGGAGGTTATACTGCAAATGTTCCTGGCAAGGGGCAACACAAATTTATGTCCTACATACGTCCCCAAAAAACCTCCCTGGTTTCAATCCAAATACCATATACTGCTTGTATGGTTTAATATCACTTAGAAATAGAAACAAATTTAACGGCTTAGAAACATATGCGGGAAATGTACA
TCACTGGCACCTGAAACTCCAATATCATCTCATAATTCATACAACTGTTTTGCAATATCACTAAC
>TRINITY_DN40138_c1_g3_i2 from sample A8 / Example unspliced isoform:AGGGGCTTGGTGCAGGCGACAAATCTTAGATTTTGGGTTCTCTGAGTTAGAAGAGCTGCCAGGTATGGAAACATTGGTACCTTCGGAGGGGTTGTAGGTGAATGGGTGTGTGAAGCTGCAGAGCATTGGTACCTGTCAGATGGGAATGCATAGAAAATTTATTTTAAAGGAAAGTAGTGAAGGCATGCAGGGGCTGAACA
CTAAAGATTATGGCCAACGATAAAGGCATTTTGCTAATTGAAAAAGGCAGAGTTAACTTATCTCAAATTGTGGGATCCTTAACTAAAAATGGGGATATTTAGGTCAAAGGGTTCTTGTTAAAGAAAAGGATTTAAAATAGGCTTATCGTGAAGATTGGGTCTTATGGATGTGGGGAAAAGCTCCCTTGTTGAAGGTTTCT
TCATTGCATAGATAAGATCAGACAATTTTATGAGTAGCCAACTAGTGACCACAGTAGTAGGTCAATGGGACACAAAAAGAGACCAGAAGGAAAAAAAGAGATGTAGCCAGTGGAGAACGTTTGGTTCCATATACTCAGgtcaaataaatttaggcctagttatatttaataaatagtagGTACAAATTATTCGCATTCAA
TTACGAGTTCCAGAATATGGCTGGAGAACTCAAAAGGTTTTCCATCTCATGAACTTTATTGTCAATGGAGGTTATACTGCAAATGTTCCTGGCAAGGGGCAACACAAATTTATGTCCTACATACGTCCCCAAAAAACCTCCCTGGTTTCAATCCAAATACCATATACTGCTTGTATGGTTTAATATCACTTAGAAATAGA
AACAAATTTAACGGCTTAGAAACATATGCGGGAAATGTACATCACTGGCACCTGAAACTCCAATATCATCTCATAATTCATACAACTGTTTTGCAATATCACTAAC