sp|Q9ZQ18|REIL2_ARATH ----> Cytoplasmic 60S subunit biogenesis factor REI1 homolog 2
Intron 1 GTGAAGCGGA ... CATACCACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 81.3 | 12.7 | 55 | 55 |
| A2 | 79.48 | 6.3 | 10 | 39 |
| A3 | 88.56 | 4.3 | 31 | 36 |
| A4 | 80.28 | 7 | 32 | 25 |
| A5 | 100 | 0 | 12 | 26 |
| A6 | 83.33 | 2 | 6 | 14 |
| A7 | 76.42 | 22.3 | 35 | 109 |
| A8 | 92.97 | 2 | 16 | 35 |
| A9 | 71.64 | 22 | 51 | 60 |
| A10 | 89.06 | 7 | 44 | 68 |
>TRINITY_DN112699_c0_g1_i2 from sample A3 / Example spliced isoformGGATACAATTCAATTGGGTGTACTTCGTCTACGGCTTACAAGTGCAGGTAGGGAGTGCGAGCTGATACCATAGGAGAGGAGAGATGGGCACAGAAAGCACCCAGAAGAAGAAGAAGGATTCTATATTTGATCTACCAGCAAATTATTTCGACTTCGCCTCGGTTCTCCGCTTACCCTCTGATACCGCTAGTTCAGCATCT
GACCCCCACAATGTGTCCCTAGGATTAGATTTAGGCGTGGGGGTACCCTCCACGTCCAGTCAGTACGCCCCGATTCCAAATGATAATGAAATTGGAAATGGAAATGGAGAAAATGAAGAAGAGAAACAGGGCAAGGGCATGGGCATGGGCATGACTATGAGCAGATGGAGTTGTAAGACGTGTACAGCTGAATTCTCATC
GCTACAAGATCAACGCTCTCATTTCAAGTCCGATTTCCATCGTTTCAATGTATGTAGTAAGGGCTAAGGCAGGTGGGAGGCAATCAACCAAAGATTCAACTGGGAGAGCTCCAAAGTCTGGCGGGGCTTCTCTGCGGCGTTACAACGAAATGGCTCTTAAAAAGGTTATGGATTTAGACCCAGTATTTTCAAATTACCGT
TGATGCTAAATTTGAAACTAGTATTTTGGTGATGGTATTCCTTCAAATCAGAT
>TRINITY_DN112699_c0_g1_i1 from sample A3 / Example unspliced isoform:GGATACAATTCAATTGGGTGTACTTCGTCTACGGCTTACAAGTGCAGGTAGGGAGTGCGAGCTGATACCATAGGAGAGGAGAGATGGGCACAGAAAGCACCCAGAAGAAGAAGAAGGATTCTATATTTGATCTACCAGCAAATTATTTCGACTTCGCCTCGGTTCTCCGCTTACCCTCTGATACCGCTAGTTCAGCATCT
GACCCCCACAATGTGTCCCTAGGATTAGATTTAGGCGTGGGGGTACCCTCCACGTCCAGTCAGTACGCCCCGATTCCAAATGATAATGAAATTGGAAATGGAAATGGAGAAAATGAAGAAGAGAAACAGGGCAAGGGCATGGGCATGGGCATGACTATGAGCAGATGGAGTTGTAAGACGTGTACAGCTGAATTCTCATC
GCTACAAGATCAACGCTCTCATTTCAAGTCCGATTTCCATCGTTTCAATgtgaagcggagaatagttggaagaggtcctctcaatgaagaggaatttgaggaagtagcacagggaacaattctaaatgatgatgacatttctagtatttctggatcagatgaagagtcagatgagcctatcagttgtggttcgcaaactc
gaactgaatcagtgaatagatccatgagtataaaaaaccagattttaatatctttatggtctggagaaattgtttcgatttggagaagtttgcttttgggtgacaaagaggatctgcttcccgaacatgacaactctatggtcaaggagaatgatgctaagggtttatgtttggctgacaaggaggtgattgggaggttg
cgatccttggttcaaaaatctggagatcagaaaaacttgagggttgtgttacttgcaagtggaggacatttcgctggttgtgtttttgatggaaataatattttagcacacaaaacataccacagGTATGTAGTAAGGGCTAAGGCAGGTGGGAGGCAATCAACCAAAGATTCAACTGGGAGAGCTCCAAAGTCTGGCGG
GGCTTCTCTGCGGCGTTACAACGAAATGGCTCTTAAAAAGGAGATTCTAGAGTTACTAGCTGCTTGGAAATGCCACTTGGACTCAGCTTTGTGCATTTATATCTATGCTCCTTCAATCAATGGTCAGGTATTTTTTGGTGGTGAAAATCCACCTTTGATTCATCATGATAATCGTGTGAGACGCATATCATTTACCACAC
GCAGACCTACACTGAAGGAAGCAAAGCGGATATACCATCAACTGACATGTGTATATACTGCTGAAAGGCCAGAGATCCAGTTTCCAAATGAGCTAGAAGAACCACCTTTAAACTCAAAGAAAGAGAAAGAGGATCCCAAAGAGTTCAATAAAACAAAAATTAAGACCAAGAACAAAACAGAAAAGGCAAGTGTTCCTGAA
ACTTGTTCTGATTTGGACCATTGGGAGAGTTCAACGATTTCTGAGACTAGTGATATCAGTAACACAGTAATGGTAAATCAGTCAGGCCCTCTCCATGAGGCAGCAAGGTCTGGGAATGCAGCACGCACTTTGGAACTTCTGGAGCAGGAAAGTAACCCTTGCATCAAAGATGACAAAGGTCAAACCCCATATGTATTGGC
AGCTGACAAAGAAACAAGGAATATCTTTCGGCGTTTCATGGCTGCAAATCCCAATAAATGGGATTGGCATGCAGCTAATGTACCCAGTCCATTGACAGAAGAAATGGAGGCTTCACAAGCAGCAAAACAGGCGGAGAAAGATGCCAAACGAAAAGCTAAAGCAAAGGAGATGAAGAAGCTGCGGAAATCAAAGCAAAAAG
CACAGGCTCAATCCACCAGTTTAGAAGTAGCTTCCGTTGCAGTGTGTTATGGACAGAATGCTGTCTCAGAGCTACTTGAGAAAGGCAAAGCATTACCCAACATGCAATCACATGCATTTCAAGAGGATTTAAAGAAGGTGCAAGCCATGGAGAGAGAAAAACGAGCAGCTGCTGCTGAGAAGAGGATGCTAGCTTCTAGC
AAAAATTCTGGGAATGTTGCTACTGCAGTATCAAGCAATGTAGGATCTAGGGACATGAATTCTGATATACACTGCTCTTGCTGTGCAGCCTCTCTGGTGGGAAAGGTGCCATTCCACAGATATAACTACAAATATTGTAGTGCCTACTGTATGCATCACCATAGAGAAATGCTCGAGGATGAATAGAGTTTTAGGCATTC
TAGCTGTTCCAAGAATATTGCTAGGCAGGCATGTATTTTCTTACAGTTCATAATCTAGCGAGGAAGAGTTCAAATCAAAATTTTCTGAGTGGGGAAAAGTTCGAGGGGCCAAATATTGAAAAGCTATTTAACATTTGGTTATTCTCTCACAGCCTATGTCATCACTACTCTAGCATCATTCATACCCTTATATTTTAAAA
TTTTATCTTTTTCTCAATGTTTGCAGTCATGCATAAATCATGCTTACTCGTTGAATTTAGTTTTGTAGATAGCAAGAATTGTTGCCTCTTATCAGTTCATCTGAAAAAAAATTCTTTTCAGGATGTAAAAGATCATTGAAATAACC