sp|Q9LYS2|AB10C_ARATH ----> ABC transporter C family member 10

Intron 1 GTGCCTAAGT ... TGCATATTAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	48.15	84	79	77
A2	56.86	66	83	91
A3	50.74	50	53	50
A4	44.76	58	43	51
A5	56.67	26	40	28
A6	59.02	50	80	64
A7	50	100	102	98
A8	57.89	108	132	165
A9	53.1	102	108	123
A10	51.34	82	89	84

>TRINITY_DN112058_c4_g3_i7 from sample A4 / Example spliced isoform

TTACTGTTGATAGTTTTGGCAAATTTTCTTTGAATTTCTACACTAAAATCTCTCTTTTGCAGTTGATGTTGGATGGGGAGATTCATCAAGCTGGGCAATATCAGGAACTACTGGTCTCAAGTGAGGCATTTAGGGAGCTTGTGAATGCACACAAGAACACTGTTTCTCAGCAAATCAGTAGTTGATTCAACGTCTGGAGG
TTTTGTTAGGATAGCCATATCTTATGGTGTCTCATTGGACATATCATTGGTATTTAGTATTTAAAACCAAGGCACACTAGCAAACTACATTGTGTCTATAGAACGCATCAAACAGTACATGCACATTCCTAGTGAGGCACCAGTAGTTATAGAAGATCTCAGGCCACCAGCTAATTGGCCCTCGCATGGGAAGGTGGAAT
TACAAGAATCGAAGATATAGATCCAACAACGCCCTTGGTCTTGGGCATTACATGCACATTTGAAGGAGGGCAAAAGATTGGCATTGTTGGTTGAACAAGAAGTGGGAAGACCACTCTCATTAGTGCTATACTCTCATTAGAACAAGAAGTGGGAAGACCACGTTGGAGGCCAACCATACTTACTGATAAGCATATGTGTG
GAAAGGAACCTTTCCACAAGCAAGCTGGAGAAGAGGATGCAAGTCAAATGAAATATTTCCATGAGATCTCCAGTATCGATCAGATATATGTCTTTGCACTTTTTCATCGAAGCTTTAGTTTTGAATTCATTTGTTTTGCAGCGTCTGTACTGTTTTCAATCAAAATTTTATTTTGGAGATTTTAAAGTTGTAATCATGCC
CATATTTTCAGATATCAATGTCCCCATTGACAATTGAGGATTTCAACCTTTTTGCTTCACCAAGAAAACTTTGTTGGACTTTACAACAACAGTCTTCCTCGGAATCTTCAAGTGTGAAAGGGCATGCTAGCAAACAATCTGAAAATGACAAGTTGGACACTTCAAGCGACGAAGACTCGAGCGAAGCAGATGGCCTGACT
TCCAACCATACTAATTATGAACCAAGTAAGAGAATGCAAGGGAAGCTGACTGTTTCTCTGAAAGGTGG

>TRINITY_DN112058_c4_g3_i1 from sample A4 / Example unspliced isoform:

TTACTGTTGATAGTTTTGGCAAATTTTCTTTGAATTTCTACACTAAAATCTCTCTTTTGCAGTTGATGTTGGATGGGGAGATTCATCAAGCTGGGCAATATCAGGAACTACTGGTCTCAAGTGAGGCATTTAGGGAGCTTGTGAATGCACACAAGAACACTGTTTCTCAGCAAATCAGTAGTTGATTCAACGTCTGGAGG
TTTTGTTAGGATAGCCATATCTTATGGTGTCTCATTGGACATATCATTGGTATTTAGTATTTAAAACCAAGGCACACTAGCAAACTACATTGTGTCTATAGAACGCATCAAACAGTACATGCACATTCCTAGTGAGGCACCAGTAGTTATAGAAGATCTCAGGCCACCAGCTAATTGGCCCTCGCATGGGAAGGTGGAAT
TACAAGAATCGAAGgtgcctaagttcttctttttgacaagataactgtgttaacaatattatattttgaattgaaatttgcatggttattgatgattgcagtcaaatatattcgttatgcatattagATATAGATCCAACAACGCCCTTGGTCTTGGGCATTACATGCACATTTGAAGGAGGGCAAAAGATTGGCATTGT
TGGTTGAACAAGAAGTGGGAAGACCACTCTCATTAGTGCTATACTCTCATTAGAACAAGAAGTGGGAAGACCACGTTGGAGGCCAACCATACTTACTGATAAGCATATGTGTGGAAAGGAACCTTTCCACAAGCAAGCTGGAGAAGAGGATGCAAGTCAAATGAAATATTTCCATGAGATCTCCAGTATCGATCAGATAT
ATGTCTTTGCACTTTTTCATCGAAGCTTTAGTTTTGAATTCATTTGTTTTGCAGCGTCTGTACTGTTTTCAATCAAAATTTTATTTTGGAGATTTTAAAGTTGTAATCATGCCCATATTTTCAGATATCAATGTCCCCATTGACAATTGAGGATTTCAACCTTTTTGCTTCACCAAGAAAACTTTGTTGGACTTTACAAC
AACAGTCTTCCTCGGAATCTTCAAGTGTGAAAGGGCATGCTAGCAAACAATCTGAAAATGACAAGTTGGACACTTCAAGCGACGAAGACTCGAGCGAAGCAGATGGCCTGACTTCCAACCATACTAATTATGAACCAAGTAAGAGAATGCAAGGGAAGCTGACTGTTTCTCTGAAAGGTGG

Intron 2 GTGCCTAAGT ... ATGATTGCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	49.66	75	79	69
A2	54.04	74	83	91
A3	45.85	62	53	52
A4	38.98	72	43	49
A5	61.67	23	40	34
A6	60.49	48	80	67
A7	49.14	103	102	97
A8	47.6	164	132	166
A9	46.19	127	108	110
A10	46.56	97	89	80

>TRINITY_DN112058_c4_g3_i3 from sample A4 / Example spliced isoform

TTCTGCTATTACTGGGTGTTTATTTGTATAAGATAATCATGCCTAACAATTTGAACTGGTGCAGGTTTTGTTAGGATAGCCATATCTTATGGTGTCTCATTGGACATATCATTGGTATTTAGTATTTAAAACCAAGGCACACTAGCAAACTACATTGTGTCTATAGAACGCATCAAACAGTACATGCACATTCCTAGTGA
GGCACCAGTAGTTATAGAAGATCTCAGGCCACCAGCTAATTGGCCCTCGCATGGGAAGGTGGAATTACAAGAATCGAAGTCAAATATATTCGTTATGCATATTAGATATAGATCCAACAACGCCCTTGGTCATGGGCATTACATGTACATTTGAAGGAGGGCAAAAGATTGGCATTGTTGGTTGAACAAGAAGTGGGAAG
ACCACTCTCATTAGTGCTATACTCTCATTAGAACAAGAAGTGGGAAGACCACGTTGGAGGCCAACCATACTTACTGATAAGCATATGTGTGGAAAGGAACCTTTCCACAAGCAAGCTGGAGAAGAGGATGCAAGTCAAATGAAATATTTCCATGAGATCTCCAGTATCGATCAGATATATGTCTTTGCACTTTTTCATCG
AAGCTTTAGTTTTGAATTCATTTGTTTTGCAGCGTCTGTACTGTTTTCAATCAAAATTTTATTTTGGAGATTTTAAAGTTGTAATCATGCCCATATTTTCAGATATCAATGTCCCCATTGACAATTGAGGATTTCAACCTTTTTGCTTCACCAAGAAAACTTTGTTGGACTTTACAACAACAGTCTTCCTCGGAATCTTC
AAGTGTGAAAGGGCATGCTAGCAAACAATCTGAAAATGACAAGTTGGACACTTCAAGCGACGAAGACTCGAGCGAAGCAGATGGCCTGACTTCCAACCATACTAATTATGAACCAAGTAAGAGAATGCAAGGGAAGCTGACTGTTTCTCTGAAAGGTGG

>TRINITY_DN112058_c4_g3_i1 from sample A4 / Example unspliced isoform:

TTACTGTTGATAGTTTTGGCAAATTTTCTTTGAATTTCTACACTAAAATCTCTCTTTTGCAGTTGATGTTGGATGGGGAGATTCATCAAGCTGGGCAATATCAGGAACTACTGGTCTCAAGTGAGGCATTTAGGGAGCTTGTGAATGCACACAAGAACACTGTTTCTCAGCAAATCAGTAGTTGATTCAACGTCTGGAGG
TTTTGTTAGGATAGCCATATCTTATGGTGTCTCATTGGACATATCATTGGTATTTAGTATTTAAAACCAAGGCACACTAGCAAACTACATTGTGTCTATAGAACGCATCAAACAGTACATGCACATTCCTAGTGAGGCACCAGTAGTTATAGAAGATCTCAGGCCACCAGCTAATTGGCCCTCGCATGGGAAGGTGGAAT
TACAAGAATCGAAGgtgcctaagttcttctttttgacaagataactgtgttaacaatattatattttgaattgaaatttgcatggttattgatgattgcagTCAAATATATTCGTTATGCATATTAGATATAGATCCAACAACGCCCTTGGTCTTGGGCATTACATGCACATTTGAAGGAGGGCAAAAGATTGGCATTGT
TGGTTGAACAAGAAGTGGGAAGACCACTCTCATTAGTGCTATACTCTCATTAGAACAAGAAGTGGGAAGACCACGTTGGAGGCCAACCATACTTACTGATAAGCATATGTGTGGAAAGGAACCTTTCCACAAGCAAGCTGGAGAAGAGGATGCAAGTCAAATGAAATATTTCCATGAGATCTCCAGTATCGATCAGATAT
ATGTCTTTGCACTTTTTCATCGAAGCTTTAGTTTTGAATTCATTTGTTTTGCAGCGTCTGTACTGTTTTCAATCAAAATTTTATTTTGGAGATTTTAAAGTTGTAATCATGCCCATATTTTCAGATATCAATGTCCCCATTGACAATTGAGGATTTCAACCTTTTTGCTTCACCAAGAAAACTTTGTTGGACTTTACAAC
AACAGTCTTCCTCGGAATCTTCAAGTGTGAAAGGGCATGCTAGCAAACAATCTGAAAATGACAAGTTGGACACTTCAAGCGACGAAGACTCGAGCGAAGCAGATGGCCTGACTTCCAACCATACTAATTATGAACCAAGTAAGAGAATGCAAGGGAAGCTGACTGTTTCTCTGAAAGGTGG