sp|Q7XWU3|CADH6_ORYSJ ----> Probable cinnamyl alcohol dehydrogenase 6
Intron 1 GTTGGTGTGC ... GTGTTTACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 37.78 | 14 | 10 | 7 |
| A2 | 36.84 | 24 | 18 | 10 |
| A3 | 34.38 | 21 | 20 | 2 |
| A4 | 31.43 | 12 | 5 | 6 |
| A5 | 100 | 0 | 6 | 0 |
| A6 | 37.6 | 39 | 26 | 21 |
| A7 | 33.91 | 115 | 60 | 58 |
| A8 | 29.61 | 214 | 58 | 122 |
| A9 | 30.45 | 153 | 61 | 73 |
| A10 | 29.36 | 83 | 43 | 26 |
>TRINITY_DN41724_c1_g4_i5 from sample A9 / Example spliced isoformCAATGGTTGGTATAATCTGCTCATCTGGAACTGAGAGAGAGATAGGAAACCGAGAATATTAAGAGGCAAGCAAGGAGTAAGGCACACGTTACAGTCGCAGCATAGGGTTTGATTGAGCCCTAAGAAATTAAGATCCATTGTACATGTCGGTCACGGATTCTATCTCGGCAGCCATGGACGCGGTAGCCTCCAAGAAGGAG
CGGCTCCGCAAGGCATACCTAGAGTTGCAATCACATTCTTTGGCTTTGGTTAACTTCACCGTCCAGTGGAAGGAGCTCTAAGATCACTTCAATGACCTGGAGAAGCTCTTGCAGAAGCACTTAGAAGAGCTCGGAGAAAAGGAGAAAGAAAATGTTAAGGAGAAAAAACTTGTCGCGGAAAAGAGCACTGAAAACCCGAA
GGAGAGAAAATCTGCAGCAGAAAACAGCGTGAGAAACCCTAAGGAGGCCTCGCCGGCTTCAAAATAAGACGTGAAACCGTGCCCAGAGCTAAAATATTTGTGCGAAAAAATGGACAACGAGGGCCTGAAGACTTTCTTGATCGCTAACCGCAAAGACGTCCGTGATGAAGTCCTTGCGGCCCTGAAATTTTCCACGGACC
CGGCCAAGCTAGTTCTACAGACCCTGGAGGATTTTTTTTCCAACCGAGTTTAATGGGAACCTTCAGCCGAAGAGACGGTCCTGTGATTTTCTATTAGAGTCCCTTTCTCTTGTTTCCTCACCGTACATGCTGTTGTTCCAGGCCAAAAAATATGCTCAGAAAATTGTTTCCCATGGAAACCTAAGCTCAACCTCGCCACT
CCATCCAGGAACGGTGTTCATTCTCTGGAGGCACACACGTTCCTGCAGCTCTTGGCTTCTTACAAAATTTCGAATAAATTCAAGGATGATGACCTTTGTGAGTTAGTCCTTCACATTGTCCACATACGACATGCAATTGACCTCTGGCGTGTGCTTCGTATTGGTCACAAGATACTGGGTTTGTAGTGAAAATCCCAGAG
AGTTTGCCATTAGATACAGCAGCACCACTGCTATGTGCAGGAATCACTATATATAGCCCCATGAAATACTTCCAAATGTCAGAGCTTGGAAAAGCCTTGGTGTGGTGGGGCTTGGAGGTTCGGGACACATGGCTGTCAAATTTGGTAAAGCTTTTGGACTGAATGTAACGGTGATTAGTACACCACCTAACAAGGAAAAG
GAAGACAGAGAGGTTTTGGGGGCAGACCACTTTCTCATTAGCAAAGACCAGAAACAAATGCAGGAAGAAGCCAAGTCTCTCAATTACATAATTGACATCGTTTCTGCTGACTATCCCTTGCATTCTCTCATCAATTTATTGAAAGTGAATGGGAAAATGTTTATGGTCGACGATTTGTCAATGGGAGTGCGATTGGATGA
TTGAAGGAAACTCAAGAGATCAAACAGAGACACTATATGGTTTTGCTAAAGGATTAAAGGATAATTTACTATAATAATAGATTACACATTTTGCAGTGATATATTTTGATCAAGGGTCATGCAGTCTGCTCGTCACTAATACATATTAAGTTCTAAGCATTCAATCTAATCACTATTTGCATTGTAGGTATAAAATAATT
AATAAAAGTTAGATTTATTTTAACACTTCTAGGCTTTGATTTGAGGTTTTACAGCGATCGAGCCTTCCGG
>TRINITY_DN41724_c1_g4_i2 from sample A9 / Example unspliced isoform:CAATGGTTGGTATAATCTGCTCATCTGGAACTGAGAGAGAGATAGGAAACCGAGAATATTAAGAGGCAAGCAAGGAGTAAGGCACACGTTACAGTCGCAGCATAGGGTTTGATTGAGCCCTAAGAAATTAAGATCCATTGTACATGTCGGTCACGGATTCTATCTCGGCAGCCATGGACGCGGTAGCCTCCAAGAAGGAG
CGGCTCCGCAAGGCATACCTAGAGTTGCAATCACATTCTTTGGCTTTGGTTAACTTCACCGTCCAGTGGAAGGAGCTCTAAGATCACTTCAATGACCTGGAGAAGCTCTTGCAGAAGCACTTAGAAGAGCTCGGAGAAAAGGAGAAAGAAAATGTTAAGGAGAAAAAACTTGTCGCGGAAAAGAGCACTGAAAACCCGAA
GGAGAGAAAATCTGCAGCAGAAAACAGCGTGAGAAACCCTAAGGAGGCCTCGCCGGCTTCAAAATAAGACGTGAAACCGTGCCCAGAGCTAAAATATTTGTGCGAAAAAATGGACAACGAGGGCCTGAAGACTTTCTTGATCGCTAACCGCAAAGACGTCCGTGATGAAGTCCTTGCGGCCCTGAAATTTTCCACGGACC
CGGCCAAGCTAGTTCTACAGACCCTGGAGGATTTTTTTTCCAACCGAGTTTAATGGGAACCTTCAGCCGAAGAGACGGTCCTGTGATTTTCTATTAGAGTCCCTTTCTCTTGTTTCCTCACCGTACATGCTGTTGTTCCAGGCCAAAAAATATGCTCAGAAAATTGTTTCCCATGGAAACCTAAGCTCAACCTCGCCACT
CCATCCAGGAACGGTGTTCATTCTCTGGAGGCACACACGTTCCTGCAGCTCTTGGCTTCTTACAAAATTTCGAATAAATTCAAGGATGATGACCTTTGTGAGTTAGTCCTTCACATTGTCCACATACGACATGCAATTGACCTCTGGCGTGTGCTTCGTATTGGTCACAAGATACTGGGTTTGTAGTGAAAATCCCAGAG
AGTTTGCCATTAGATACAGCAGCACCACTGCTATGTGCAGGAATCACTATATATAGCCCCATGAAATACTTCCAAATGTCAGAGCTTGGAAAAGCCTTGGTGTGGTGGGGCTTGGAGGTTCGGGACACATGGCTGTCAAATTTGGTAAAGCTTTTGGACTGAATGTAACGGTGATTAGTACACCACCTAACAAGGAAAAG
GAAGACAGAGAGGTTTTGGGGGCAGACCACTTTCTCATTAGCAAAGACCAGAAACAAATGCAGGAAGAAGCCAAGTCTCTCAATTACATAATTGACATCGTTTCTGCTGACTATCCCTTGCATTCTCTCATCAATTTATTGAAAGTGAATGGGAAAATGTTTATGgttggtgtgcctgaaaagcctattttcttccatct
tacgatcgtcatatttgctgtatttttttgcttctttgtgcatgctatgtgatatgaatctgtggatatggaaaaaactctttgggggatgtttcatggggttggtttgttttgtttggtgtttacagGTCGACGATTTGTCAATGGGAGTGCGATTGGATGATTGAAGGAAACTCAAGAGATCAAACAGAGACACTATA
TGGTTTTGCTAAAGGATTAAAGGATAATTTACTATAATAATAGATTACACATTTTGCAGTGATATATTTTGATCAAGGGTCATGCAGTCTGCTCGTCACTAATACATATTAAGTTCTAAGCATTCAATCTAATCACTATTTGCATTGTAGGTATAAAATAATTAATAAAAGTTAGATTTATTTTAACACTTCTAGGCTTT
GATTTGAGGTTTTACAGCGATCGAGCCTTCCGG
Intron 2 GTTGGTGTGC ... GTGTTTACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 46.15 | 14 | 10 | 14 |
| A2 | 44.19 | 24 | 18 | 20 |
| A3 | 34.38 | 21 | 20 | 2 |
| A4 | 45.45 | 12 | 5 | 15 |
| A5 | 100 | 0 | 6 | 2 |
| A6 | 40.46 | 39 | 26 | 27 |
| A7 | 34.1 | 115 | 60 | 59 |
| A8 | 31.85 | 214 | 58 | 142 |
| A9 | 31.24 | 153 | 61 | 78 |
| A10 | 30.83 | 83 | 43 | 31 |
>TRINITY_DN112818_c0_g3_i2 from sample A2 / Example spliced isoformCGGCCAAGCTAGTTCTACAGACCCTGGAGGATTTTTTTTCCAACCGAGTTTAATGGGAACCTTCAGCCGAAGAGACGGTCCTGTGATTTTCTATTAGAGTCCCTTTCTCTTGTTTCCTCACCGTACATGCTGTTGTTCCAGGCCAAAAAATATGCTCAGAAAATTGTTTCCCATGGAAACCTAAGCTCAACCTCGCCACT
CCATCCAGGAACGGTGTTCATTCTCTGGAGGCACACACGTTCCTGCAGCTCTTGGCTTCTTACAAAATTTCGAATAAATTCAAGGATGATGACCTTTGTGAGTTAGTCCTTCACATTGTCCACATACGACATGCAATTGACCTCTGGCGTGTGCTTCGTATTGGTCACAAGATACTGGGTTTGTAGTGAAAATCCCAGAG
AGTTTGCCATTAGATACAGCAGCACCACTGCTATGTGCAGGAATCACTATATATAGCCCCATGAAATACTTCCAAATGTCAGAGCTTGGAAAAGCCTTGGTGTGGTGGGGCTTGGAGGTTCGGGACACATGGCTGTCAAATTTGGTAAAGCTTTTGGACTGAATGTAACGGTGATTAGTACACCACCTAACAAGGAAAAG
GAAGACAGAGAGGTTTTGGGGGCAGACCACTTTCTCATTAGCAAAGACCAGAAACAAATGCAGGAAGAAGCCAAGTCTCTCAATTACATAATTGACATCGTTTCTGCTGACTATCCCTTGCATTCTCTCATCAATTTATTGAAAGTGAATGGGAAAATGTTTATGGTCGACGATTTGTCAATGGGAGTGCGATTGGATGA
TTGAAGGAAACTCAAGAGATCAAACAGAGACACTATATGGTTTTGCTAAAGGATTAAAGGATAATTTACTATAATAATAGATTACACATTTTGCAGTGATATATTTTGATCAAGGGTCATGCAGTCTGCTCGTCACTAATACATATTAAGTTCTAAGCATTCAATCTAATCACTATTTGCATTGTAGGTATAAAATAATT
TGTAAATAATTCATATAAGTTAGATTTACAGCGATCGAGCCATCCCACAGACAATAACATTTACGAGTTTTACTTCATAGCTTGGCGAGGTTTTACAGCCATCGAGCGATCCCACGGACAATAACATTTACGAGTTTTACTTCATAGCTTGGCGAGGTTTTACAGCCATCGAGCGATCCCACGGACAATAACATTTACGA
GTTTTA
>TRINITY_DN112818_c0_g3_i1 from sample A2 / Example unspliced isoform:CGGCCAAGCTAGTTCTACAGACCCTGGAGGATTTTTTTTCCAACCGAGTTTAATGGGAACCTTCAGCCGAAGAGACGGTCCTGTGATTTTCTATTAGAGTCCCTTTCTCTTGTTTCCTCACCGTACATGCTGTTGTTCCAGGCCAAAAAATATGCTCAGAAAATTGTTTCCCATGGAAACCTAAGCTCAACCTCGCCACT
CCATCCAGGAACGGTGTTCATTCTCTGGAGGCACACACGTTCCTGCAGCTCTTGGCTTCTTACAAAATTTCGAATAAATTCAAGGATGATGACCTTTGTGAGTTAGTCCTTCACATTGTCCACATACGACATGCAATTGACCTCTGGCGTGTGCTTCGTATTGGTCACAAGATACTGGGTTTGTAGTGAAAATCCCAGAG
AGTTTGCCATTAGATACAGCAGCACCACTGCTATGTGCAGGAATCACTATATATAGCCCCATGAAATACTTCCAAATGTCAGAGCTTGGAAAAGCCTTGGTGTGGTGGGGCTTGGAGGTTCGGGACACATGGCTGTCAAATTTGGTAAAGCTTTTGGACTGAATGTAACGGTGATTAGTACACCACCTAACAAGGAAAAG
GAAGACAGAGAGGTTTTGGGGGCAGACCACTTTCTCATTAGCAAAGACCAGAAACAAATGCAGGAAGAAGCCAAGTCTCTCAATTACATAATTGACATCGTTTCTGCTGACTATCCCTTGCATTCTCTCATCAATTTATTGAAAGTGAATGGGAAAATGTTTATGgttggtgtgcctgaaaagcctattttcttccatct
tacgatcgtcatatttgctgtatttttttgcttctttgtgcatgctatgtgatatgaatctgtggatatggaaaaaactctttgggggatgtttcatggggttgattttgagaagagccttattgtgcaatttttttgttttgtttggtgtttacagGTCGACGATTTGTCAATGGGAGTGCGATTGGATGATTGAAGGA
AACTCAAGAGATCAAACAGAGACACTATATGGTTTTGCTAAAGGATTAAAGGATAATTTACTATAATAATAGATTACACATTTTGCAGTGATATATTTTGATCAAGGGTCATGCAGTCTGCTCGTCACTAATACATATTAAGTTCTAAGCATTCAATCTAATCACTATTTGCATTGTAGGTATAAAATAATTTGTAAATA
ATTCATATAAGTTAGATTTACAGCGATCGAGCCATCCCACAGACAATAACATTTACGAGTTTTACTTCATAGCTTGGCGAGGTTTTACAGCCATCGAGCGATCCCACGGACAATAACATTTACGAGTTTTACTTCATAGCTTGGCGAGGTTTTACAGCCATCGAGCGATCCCACGGACAATAACATTTACGAGTTTTA
Intron 3 GTTTGTAGTG ... GTGTTTACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 51.61 | 15 | 25 | 7 |
| A2 | 37.5 | 30 | 26 | 10 |
| A3 | 32 | 17 | 14 | 2 |
| A4 | 44.19 | 12 | 13 | 6 |
| A5 | 0 | 2 | 0 | 0 |
| A6 | 31.48 | 37 | 13 | 21 |
| A7 | 33.55 | 103 | 46 | 58 |
| A8 | 35.75 | 186 | 85 | 122 |
| A9 | 34.03 | 126 | 57 | 73 |
| A10 | 36.42 | 55 | 37 | 26 |
>TRINITY_DN41724_c1_g4_i4 from sample A9 / Example spliced isoformCAATGGTTGGTATAATCTGCTCATCTGGAACTGAGAGAGAGATAGGAAACCGAGAATATTAAGAGGCAAGCAAGGAGTAAGGCACACGTTACAGTCGCAGCATAGGGTTTGATTGAGCCCTAAGAAATTAAGATCCATTGTACATGTCGGTCACGGATTCTATCTCGGCAGCCATGGACGCGGTAGCCTCCAAGAAGGAG
CGGCTCCGCAAGGCATACCTAGAGTTGCAATCACATTCTTTGGCTTTGGTTAACTTCACCGTCCAGTGGAAGGAGCTCTAAGATCACTTCAATGACCTGGAGAAGCTCTTGCAGAAGCACTTAGAAGAGCTCGGAGAAAAGGAGAAAGAAAATGTTAAGGAGAAAAAACTTGTCGCGGAAAAGAGCACTGAAAACCCGAA
GGAGAGAAAATCTGCAGCAGAAAACAGCGTGAGAAACCCTAAGGAGGCCTCGCCGGCTTCAAAATAAGACGTGAAACCGTGCCCAGAGCTAAAATATTTGTGCGAAAAAATGGACAACGAGGGCCTGAAGACTTTCTTGATCGCTAACCGCAAAGACGTCCGTGATGAAGTCCTTGCGGCCCTGAAATTTTCCACGGACC
CGGCCAAGCTAGTTCTACAGACCCTGGAGGATTTTTTTTCCAACCGAGTTTAATGGGAACCTTCAGCCGAAGAGACGGTCCTGTGATTTTCTATTAGAGTCCCTTTCTCTTGTTTCCTCACCGTACATGCTGTTGTTCCAGGCCAAAAAATATGCTCAGAAAATTGTTTCCCATGGAAACCTAAGCTCAACCTCGCCACT
CCATCCAGGAACGGTGTTCATTCTCTGGAGGCACACACGTTCCTGCAGCTCTTGGCTTCTTACAAAATTTCGAATAAATTCAAGGATGATGACCTTTGTGAGTTAGTCCTTCACATTGTCCACATACGACATGCAATTGACCTCTGGCGTGTGCTTCGTATTGGTCACAAGATACTGGGTCGACGATTTGTCAATGGGAG
TGCGATTGGATGATTGAAGGAAACTCAAGAGATCAAACAGAGACACTATATGGTTTTGCTAAAGGATTAAAGGATAATTTACTATAATAATAGATTACACATTTTGCAGTGATATATTTTGATCAAGGGTCATGCAGTCTGCTCGTCACTAATACATATTAAGTTCTAAGCATTCAATCTAATCACTATTTGCATTGTAG
GTATAAAATAATTAATAAAAGTTAGATTTATTTTAACACTTCTAGGCTTTGATTTGAGGTTTTACAGCGATCGAGCCTTCCGG
>TRINITY_DN41724_c1_g4_i2 from sample A9 / Example unspliced isoform:CAATGGTTGGTATAATCTGCTCATCTGGAACTGAGAGAGAGATAGGAAACCGAGAATATTAAGAGGCAAGCAAGGAGTAAGGCACACGTTACAGTCGCAGCATAGGGTTTGATTGAGCCCTAAGAAATTAAGATCCATTGTACATGTCGGTCACGGATTCTATCTCGGCAGCCATGGACGCGGTAGCCTCCAAGAAGGAG
CGGCTCCGCAAGGCATACCTAGAGTTGCAATCACATTCTTTGGCTTTGGTTAACTTCACCGTCCAGTGGAAGGAGCTCTAAGATCACTTCAATGACCTGGAGAAGCTCTTGCAGAAGCACTTAGAAGAGCTCGGAGAAAAGGAGAAAGAAAATGTTAAGGAGAAAAAACTTGTCGCGGAAAAGAGCACTGAAAACCCGAA
GGAGAGAAAATCTGCAGCAGAAAACAGCGTGAGAAACCCTAAGGAGGCCTCGCCGGCTTCAAAATAAGACGTGAAACCGTGCCCAGAGCTAAAATATTTGTGCGAAAAAATGGACAACGAGGGCCTGAAGACTTTCTTGATCGCTAACCGCAAAGACGTCCGTGATGAAGTCCTTGCGGCCCTGAAATTTTCCACGGACC
CGGCCAAGCTAGTTCTACAGACCCTGGAGGATTTTTTTTCCAACCGAGTTTAATGGGAACCTTCAGCCGAAGAGACGGTCCTGTGATTTTCTATTAGAGTCCCTTTCTCTTGTTTCCTCACCGTACATGCTGTTGTTCCAGGCCAAAAAATATGCTCAGAAAATTGTTTCCCATGGAAACCTAAGCTCAACCTCGCCACT
CCATCCAGGAACGGTGTTCATTCTCTGGAGGCACACACGTTCCTGCAGCTCTTGGCTTCTTACAAAATTTCGAATAAATTCAAGGATGATGACCTTTGTGAGTTAGTCCTTCACATTGTCCACATACGACATGCAATTGACCTCTGGCGTGTGCTTCGTATTGGTCACAAGATACTGGgtttgtagtgaaaatcccagag
agtttgccattagatacagcagcaccactgctatgtgcaggaatcactatatatagccccatgaaatacttccaaatgtcagagcttggaaaagccttggtgtggtggggcttggaggttcgggacacatggctgtcaaatttggtaaagcttttggactgaatgtaacggtgattagtacaccacctaacaaggaaaag
gaagacagagaggttttgggggcagaccactttctcattagcaaagaccagaaacaaatgcaggaagaagccaagtctctcaattacataattgacatcgtttctgctgactatcccttgcattctctcatcaatttattgaaagtgaatgggaaaatgtttatggttggtgtgcctgaaaagcctattttcttccatct
tacgatcgtcatatttgctgtatttttttgcttctttgtgcatgctatgtgatatgaatctgtggatatggaaaaaactctttgggggatgtttcatggggttggtttgttttgtttggtgtttacagGTCGACGATTTGTCAATGGGAGTGCGATTGGATGATTGAAGGAAACTCAAGAGATCAAACAGAGACACTATA
TGGTTTTGCTAAAGGATTAAAGGATAATTTACTATAATAATAGATTACACATTTTGCAGTGATATATTTTGATCAAGGGTCATGCAGTCTGCTCGTCACTAATACATATTAAGTTCTAAGCATTCAATCTAATCACTATTTGCATTGTAGGTATAAAATAATTAATAAAAGTTAGATTTATTTTAACACTTCTAGGCTTT
GATTTGAGGTTTTACAGCGATCGAGCCTTCCGG