NA ----> NA

Intron 1 GTGAGATGAG ... TTATTTCCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	13.91	260	53	31
A2	16.16	179	40	29
A3	12.69	227	41	25
A4	24.62	150	53	45
A5	15.89	127	26	22
A6	10.31	809	129	57
A7	13.06	1155	187	160
A8	13.55	970	160	144
A9	9.87	1027	156	69
A10	11.82	1130	177	126

>TRINITY_DN109353_c0_g1_i6 from sample A5 / Example spliced isoform

TGTTCTCTGTAGTTATTTCTTTTTGTCTGTATTTTGTTGTCTGTAGTTATTTCTTTTTGTCTGTATTTTCGTGTGAATGTTATGTGATTATTGAGAGGGCGGGAGGTGAATCATTCTTGAATCATTCTTCTTGGTGAATTTGAATCTCCTCAGTCCGTTTCCTCTCAGTCCCGTGTTCGCTTTTGGAGCGCTCCTTTGTT
TTGTGTGTTGTCTGTTCTCTCTGGTTATTTCTTTTTCTCTGTATTTTGTTCTCTGTAGTATTTATTTTTGTCTGTATTTTGTTCTTTGTAGTTATTTCTTTTTATCTGTATTTTGTCCTCTGTAGTTCTTTCTTTTTGTGTGTTGTCTGTATCGTGTTCTCTCTAGTTCTTTCTTTTTGCCTGTATTTTGTTCTCTGTAG
CTCTTTCTTTTTGCCTGTATTTTGTTCTCTGTAGTTATTTCTTTTTGTCTGTATTTTCGTGTGAATGTTATGTGATAACTGAGAGGGGGGAGGTGCAATTACATTTATGCGCGATGGTGACGGAAGGAGGTGAGGAACATAAGCTGATGAATGGTTTTTACATCGACTTCACTTATGCGCGATGGCAATGAAGATGGATT
TCCTCGCAGAATGGAAGTTTTCCGGCTGGACGAACACTGGACACTGGCTGGAGGGTTGTTTCACCATCAGGAGCGAACAAGGGAAG

>TRINITY_DN109353_c0_g1_i11 from sample A5 / Example unspliced isoform:

ATTTTTCTCGGTGAATTTGAATCTCCTCCCTGCCCTCTCTGGTCCGTTTCCTCTCAGTCCGTTGGAATTGTGTTCTCTGTAGTTATTTCTTTTTGTCCGTATTTTGTTCTCTGCAGTTATTTCTTTTTGTCTGTATTTCGTTCTTTGCAGTTATTTCTTTTTGTCTGTATTTTGTTGTCTGTAGTTATTTCTTTTTGTCT
GTATTTTGTTGTCTGTAGTTATTTCTTTTCGTGTGAATGTTATGTGATTATTGAGAGGGCGGGAGGTGAATCATTCTTGAATCATTCTTCTTGGTGAATTTGAATCTCCTCAGTCCGTTTCCTCTCAGTCCCGTGTTCGCTTTTGGAGCGCTCCTTTGTTTTGTGTGTTGTCTGTATTGTGTTCTCTCTGGTTATTTCTT
TTTCTCTGTATTTTGTTCTCTGTAGTATTTATTTTTGTCTGTATTTTGTTCTTTGTAGTTATTTCTTTTTATCTGTATTTTGTCCTCTGTAGTTCTTTCTTTTTGTGTGTTGTCTGTATCGTGTTCTCTCTAGTTCTTTCTTTTTGCCTGTATTTTGTTCTCTGTAGCTCTTTCTTTTTGCCTGTATTTTGTTCTCTGTA
GTTATTTCTTTTTATCTGTATTTTGTGTCTGTATTTTCGTGTGAATGTTATGTGATAACTGAGAGGGGGGAGGTGCAATTACATTTATGCGCGATGGTGACGGAAGGAGGTGAGGAACATAAGCTGATGAATGGTTTTTACATCGACTTCACTTATGCGCGATGgtgagatgaggagatttttttctttttcaaattata
tatttatttaattggtgtgatggatagctgctctgtgattgattgcgatttcaatgcattgagattgattccaattccaattcatttagatttagtatttgtagtttattcatcataaaatcatatgttattttcttatttccagGCAATGAAGATGGATTTCCTCGCAGAATGGAAGTTTTCCGGCTGGACGAACACTG
GACACTGGCTGGAGGGTTGTTTCACCATCAGGAGCGAACAAGGGAAG