NA ----> NA

Intron 1 GCCGTAGCCA ... CCCAACATAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	33.33	9	9	0
A2	81.82	1	7	2
A3	33.33	2	1	1
A4	-1	0	0	0
A5	66.67	2	4	4
A6	53.85	21	27	22
A7	39.53	26	20	14
A8	41.05	28	21	18
A9	45.45	24	25	15
A10	63.64	6	13	8

>TRINITY_DN41156_c3_g1_i6 from sample A6 / Example spliced isoform

GGTAAGACCCTCCCTGCAGCATAATTTGTTTCTACGATTTTTCGAGAGCACCGCTCTGCAACGGTGATCAAAGGGAGAGAGAGCCATGGGCTCCATGAGTCGGGCAGTCAAGCTTCCAAAGGTCAACCGAATCAACCTATAGCCCTATCTCCAACGCAGGGTTCGGAATGGCGGCAGTCCCCCCCGGGATCCCCTTCCTC
CCCTCTGGGCTTCTCCTCCTGCCAAGGCCATGGCCCATGGCCACCCATGGCCGTAGCTTAGCCGCTGGGCAGGCTGTGCCAGGCCACCATGGTCGTGAGCCATGAACGTTTTTCTCTTTTGTTTGTTTGTTTTAGGTTTATTTATATTTTAACAAAACTTCATATATATGTTTTTTTTTAAACCACAGGCGGCAGCGCCA
AGGCCACCATGGCTGTGCTCAGCCAGAATTTAAACGTTAACCCTAAAAAAATTTCTGT

>TRINITY_DN41156_c3_g1_i4 from sample A6 / Example unspliced isoform:

GGTAAGACCCTCCCTGCAGCATAATTTGTTTCTACGATTTTTCGAGAGCACCGCTCTGCAACGGTGATCAAAGGGAGAGAGAGCCATGGGCTCCATGAGTCGGGCAGTCAAGCTTCCAAAGGTCAACCGAATCAACCTATAGCCCTATCTCCAACGCAGgccgtagccaaaggctgtttggccaggctgcactcctaggc
cgcgccaaggcaggcccatcgccgccgagctgtaccctggttggcccatggccgccggctatgccctgcttgggcaagcaaaccccaacatagGGTTCGGAATGGCGGCAGTCCCCCCCGGGATCCCCTTCCTCCCCTCTGGGCTTCTCCTCCTGCCAAGGCCATGGCCCATGGCCACCCATGGCCGTAGCTTAGCCGCT
GGGCAGGCTGTGCCAGGCCACCATGGTGTAAAAAAAAATCCAAGGCTTTTAGCAAGAAGTTACTCTACACTTATTTTGATATTTTGCAGCTAAATTATTCATGTAAATGTTTTTGTAATTCTTGTGCTAATTTAGCAATTAGCTTTTCACACTGTAAATTCCCTTTTCACTATTGTTTTGTTCAAGTGTAGTGAGCCCTT
TGGTTCAGATTTGGAACCATGGCTCTGATACCATATGTAAGACCCCAACTTGGGTCTCCTTTAACTCTTAATAAAGTCAGATATTTCACTTCTTG