NA ----> NA

Intron 1 GTGAATTTCA ... AGCTTATGAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	43.68	49	43	33
A2	45.45	54	45	45
A3	55.42	37	53	39
A4	40.88	47	30	35
A5	45.71	57	57	39
A6	55.56	12	21	9
A7	43.59	11	7	10
A8	47.06	27	17	31
A9	50	12	14	10
A10	77.78	2	10	4

>TRINITY_DN45508_c3_g3_i4 from sample A8 / Example spliced isoform

GAACGGTGCTGGAAGTCTTGTTGAGTAAAATAAAGAGGAGTATGATTTGAAGCGGTTTCCGTGAAAGAAGAGTGGGAGTTTGAACAGAGGAGGAACGGTAAAAGAACAGCAGATGAGAGCTTATGAGGCAAAGACGTATATGTACAAGAATTTCAACTACCGCAAGAATTTATGTTTTGTGTTTTTTGGATTTGGGAGAG
AAAAAAACTACTACCGAAAACAGCAGATGAGAGAACAGAGGAGGAACGGTAAAAGAACAGCAGATGAGAGCTTATGAGGCAAAGACGTATATGTACAAGAATTTCAACTACCGCAAGAATTTTTGTTGTGTTTTTTGGATTTGGGAGA

>TRINITY_DN45508_c3_g3_i3 from sample A8 / Example unspliced isoform:

CTGGATACTTGCCTCAAAGCTTTAAGTCAGTGCATGAATCTATGGTTGGTGCAGGAATAAATCTTGGTAGTCCATGAGAAGCGTGAGGAGCAGAGATGGAGCTTGAACAGAGGAGGAACGGTGCTGGAAGTCTTGTTGAGTAAAATAAAGAGGAGTATGATTTGAAGCGGTTTCCGTGAAAGAAGAGTGGGAGTTTGAAC
AGAGGAGGAACGGTAAAAGAACAGCAGATGAGAGCTTATGAGGCAAAGACGTATATGTACAAGAATTTCAACTACCGCAAGAATTTATGTTTTGTGTTTTTTGGATTTGGGAGAGGAAAAAAACAGCAGATGAGAGCTTATGAGgtgaatttcagctcccgcggaattttaagattgcaggtgaatttcagcttcgtggg
gagtttcagtaatcccgaaattttaagatggagaggcgcgaggagcagagatggagcttgaacagaggaggaacggtgctggaagtcttgttgagtaaaataaagaggagtatgatttgaagcggtttccgtgaaagaagagtgggagtttgaacagaggaggaacggtaaaagaacagcagatgagagcttatgagGCA
AAGACGTATATGTACAAGAATTTCAACTACCGCAAGAATTTTTGTTGTGTTTTTTGGATTTGGGAGA