sp|Q69XJ4|HMOX1_ORYSJ ----> Heme oxygenase 1, chloroplastic
Intron 1 GTCTCATGCC ... GTAGGAAGAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 5.71 | 1.9 | 0 | 0.3 |
| A2 | -1 | 0 | 0 | 0 |
| A3 | 6.59 | 4.7 | 0 | 0.9 |
| A4 | 0 | 2 | 0 | 0 |
| A5 | -1 | 0 | 0 | 0 |
| A6 | 31.66 | 9.6 | 5 | 3.9 |
| A7 | 4.08 | 8.6 | 0 | 0.9 |
| A8 | 18.55 | 11.6 | 2.3 | 3.1 |
| A9 | 12.31 | 20.7 | 5 | 0.9 |
| A10 | 3.43 | 10.6 | 0 | 0.9 |
>TRINITY_DN35427_c0_g1_i4 from sample A8 / Example spliced isoformAAAAGATGGTGCCTTACTGCTAAGACTTCAACATAATAAAATTCCAATAGTAGTAGTATTATCACGTCTTATATGTAAACCGATCTGCAACCTTATCTGTAAATTTGAACATAGCTGACTATATCACAGCTTCACCTCATCTAGTGGGAGGGAGAAAACATAAATAAGTTCCCAAGAGTGAATGCATACGTGATTTTACA
GAGACAAAGGTGTCCATCAATTAAGGGGTTCAAGTCGAGAAGGCAATGCAGGCATTTGGTTTCTTCAATGGCACCTATCAGTGCATATTTAAACCAACTGTTTGTTATCCCGTGCAGTCCAAGGAGCACAGAATCTGCATTAACTGCAAAGGCTTGAAGGAATCGAAAGGATTCGGCAGTGGCGCTGGGAAAAAGATGGG
TTCGAATCCAGCAAAGAAGGCAGCATCCGGAGGCGGGAAGCCCAGGAGGGCGGTAACTGTCAAGGAGGGCTCCGCTTACGTCAAGAAAATTTTGAATGAAGTAGAAAAGGGGAAGCTTAATATTGATCCAGAAGTTGCTACAAAGGGAAAAGTAGATTTTGTGCAGGTGGAATCATGGGGAGATGAAGCACTAGAAGATT
TAAAAATGAAAAGTTTCAGCCCATCTTTTACATCGTTAGATCAGGATGCTCCATTCTATGAACAACTTGTCCGTAGATTGCAGCTTTTTGAGGCAAAGGGAGACATTACAGTTGTTCAGGAAAAACCGTTGCCTCCATTTGAGAAGTGGCTGTTTGGTGAGCACAATTATCTTCAATTCCTGATGGATCAGGAAGCTGTC
TATACAGCTTTCGAAAATGCAATATCAATCATTAAAAAATCAAGATGCTCTAGCCAGGATGAAAGTACACATGGTGGAGCAGCAAGGGCTGTCAGCATATTTGACAATGACTTGGGGTTAAGTAGGTCTGAGGCTCTTAAGTCAGACATTGAATCATTGTCTTCAATAATGACCTCCAAATGTGTAAATCAAGGCATAGA
ATTGCCAAAGGTTACCACTCAAGCCATGGCATATGCAAAGTATGTTGAGCGTCTAGGAAAAATTGCTGCTGTTGGAGAAAAATGGAAGGAGGCATGTCTTTGTTTGCTATCTCATATTTTTGTCGTTCATGTTGCTCACCTCACCACAGGAATGCGAATTGGTGCCAAAGCTGTGGATTCTCTGCCATCCCTAATCGAGG
CAAGAGCTATTAGTTTCTATCGTGATTATCAACAGCAAGCTGATGATCCTCTTAAAGTGTTCATGATGGCTATAAACAAAGCTGGGGACTTGATAAATTCAGAGGATGATCGTGAACAGGTCATGTCAGAACTTCCTAAAGCCATTCAAAAAACGAGCTTGCTTCTAGCAGTTCTGGCAGTGGACTAATATGATATGCAC
AGCTATGACCTTGATAGTAATTTTTAGGAGATTATTGTGTTTATAATTTCTATCTTCTGTAAAACATAAAATAATATTATTGCCACAATATTTTAGAATGGATTGTGCTTTAAGAATATTCCTTCCACATGTTACTTTTCGTTGTATTGATGGGATTATGCCAGGCATCAAAAGAAATCGCTGCCTCCTTTGAAGTTCTT
GGAGGTTTGTGAGAAACCCCCTTATTATTATTGCCACAACATTTTATAATGAGATGTGCTTTAAGAATATCTGTCCACATGTTACTTTTCGCTGTATTGATGGGATTATGCCAGG
>TRINITY_DN35427_c0_g1_i3 from sample A8 / Example unspliced isoform:AAAAGATGGTGCCTTACTGCTAAGACTTCAACATAATAAAATTCCAATAGTAGTAGTATTATCACGTCTTATATGTAAACCGATCTGCAACCTTATCTGTAAATTTGAACATAGCTGACTATATCACAGCTTCACCTCATCTAGTGGGAGGGAGAAAACATAAATAAGTTCCCAAGAGTGAATGCATACGTGATTTTACA
GAGACAAAGGTGTCCATCAATTAAGGGGTTCAAGTCGAGAAGGCAATGCAGGCATTTGGTTTCTTCAATGGCACCTATCAGTGCATATTTAAACCAACTGTTTGTTATCCCGTGCAGTCCAAGGAGCACAGAATCTGCATTAACTGCAAAGGCTTGAAGGAATCGAAAGGATTCGGCAGTGGCGCTGGGAAAAAGATGGG
TTCGAATCCAGCAAAGAAGGCAGCATCCGGAGGCGGGAAGCCCAGGAGGGCGGTAACTGTCAAGGAGGGCTCCGCTTACGTCAAGAAAATTTTGAATGAAGTAGAAAAGGGGAAGCTTAATATTGATCCAGAAGTTGCTACAAAGGGAAAAGTAGATTTTGTGCAGGTGGAATCATGGGGAGATGAAGCACTAGAAGATT
TAAAAATGAAAAGTTTCAGCCCATCTTTTACATCGTTAGATCAGGATGCTCCATTCTATGAACAACTTGTCCGTAGATTGCAGCTTTTTGAGGCAAAGGGAGACATTACAGTTGTTCAGGAAAAACCGTTGCCTCCATTTGAGAAGTGGCTGTTTGGTGAGCACAATTATCTTCAATTCCTGATGGATCAGGCTCTTAAG
TCAGACATTGAATCATTGTCTTCAATAATGACCTCCAAATGTGTAAATCAAGGCATAGAATTGCCAAAGGTTACCACTCAAGCCATGGCATATGCAAAGTATGTTGAGCGTCTAGGAAAAATTGCTGCTGTTGGAGAAAAATGGAAGGAGGCATGTCTTTGTTTGCTATCTCATATTTTTGTCGTTCATGTTGCTCACCT
CACCACAGgtctcatgccgcccttgtctatttagtgaagatataaaatgtaggaagagGAATGCGAATTGGTGCCAAAGCTGTGGATTCTCTGCCATCCCTAATCGAGGCAAGAGCTATTAGTTTCTATCGTGATTATCAACAGCAAGCTGATGATCCTCTTAAAGTGTTCATGATGGCTATAAACAAAGCTGGGGACTT
GATAAATTCAGAGGATGATCGTGAACAGGTCATGTCAGAACTTCCTAAAGCCATTCAAAAAACGAGCTTGCTTCTAGCAGTTCTGGCAGTGGACTAATATGATATGCACAGCTATGACCTTGATAGTAATTTTTAGGAGATTATTGTGTTTATAATTTCTATCTTCTGTAAAACATAAAATAATATTATTGCCACAATAT
TTTAGAATGGATTGTGCTTTAAGAATATTCCTTCCACATGTTACTTTTCGTTGTATTGATGGGATTATGCCAGGCATCAAAAGAAATCGCTGCCTCCTTTGAAGTTCTTGGAGGTTTGTGAGAAACCCCCTTATTATTATTGCCACAACATTTTATAATGAGATGTGCTTTAAGAATATCTGTCCACATGTTACTTTTCG
CTGTATTGATGGGATTATGCCAGG
Intron 2 GCTCTTAAGT ... ATATGCAAAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 50 | 1 | 2 | 0 |
| A2 | 88.24 | 1 | 5 | 10 |
| A3 | 60 | 2 | 3 | 3 |
| A4 | 100 | 0 | 1 | 3 |
| A5 | -1 | 0 | 0 | 0 |
| A6 | 58.62 | 6 | 7 | 10 |
| A7 | 64.71 | 6 | 15 | 7 |
| A8 | 71.43 | 4 | 12 | 8 |
| A9 | 65.52 | 5 | 6 | 13 |
| A10 | 65.22 | 4 | 6 | 9 |
>TRINITY_DN38208_c0_g1_i4 from sample A7 / Example spliced isoformAAGATGGTGCCTTACTGCTAAGACTTCAACATAATAAAATTCCAATAGTAGTAGTATTATCACGTCTTATATGTAAACCGATCTGCAACCTTATCTGTAAATTTGAACATAGCTGACTATATCACAGCTTCACCTCATCTAGTGGGAGGGAGAAAACATAAATAAGTTCCCAAGAGTGAATGCATACGTGATTTTACAGA
GACAAAGGTGTCCATCAATTAAGGGGTTCAAGTCGAGAAGGCAATGCAGGCATTTGGTTTCTTCAATGGCACCTATCAGTGCATATTTAAACCAACTGTTTGTTATCCCGTGCAGTCCAAGGAGCACAGAATCTGCATTAACTGCAAAGGCTTGAAGGAATCGAAAGGATTCGGCAGTGGCGCTGGGAAAAAGATGGGTT
CGAATCCAGCAAAGAAGGCAGCATCCGGAGGCGGGAAGCCCAGGAGGGCGGTAACTGTCAAGGAGGGCTCCGCTTACGTCAAGAAAATTTTGAATGAAGTAGAAAAGGGGAAGCTTAATATTGATCCAGAAGTTGCTACAAAGGGAAAAGTAGATTTTGTGCAGGTGGAATCATGGGGAGATGAAGCACTAGAAGATTTA
AAAATGAAAAGTTTCAGCCCATCTTTTACATCGTTAGATCAGGATGCTCCATTCTATGAACAACTTGTCCGTAGATTGCAGCTTTTTGAGGCAAAGGGAGACATTACAGTTGTTCAGGAAAAACCGTTGCCTCCATTTGAGAAGTGGCTGTTTGGTGAGCACAATTATCTTCAATTCCTGATGGATCAGTATGTTGAGCG
TCTAGGAAAAATTGCTGCTGTTGGAGAAAAATGGAAGGAGGCATGTCTTTGTTTGCTATCTCATATTTTTGTCGTTCATGTTGCTCACCTCACCACAGGAATGCGAATTGGTGCCAAAGCTGTGGATTCTCTGCCATCCCTAATCGAGGCAAGAGCTATTAGTTTCTATCGTGATTATCAACAGCAAGCTGATGATCCTC
TTAAAGTGTTCATGATGGCTATAAACAAAGCTGGGGACTTGATAAATTCAGAGGATGATCGTGAACAGGTCATGTCAGAACTTCCTAAAGCCATTCAAAAAACGAGCTTGCTTCTAGCAGTTCTGGCAGTGGACTAATATGATATGCACAGCTATGACCTTGATAGTAATTTTTAGGAGATTATTGTGTTTATAATTTCT
ATCTTCTGTAAAACATAAAATAATATTATTGCCACAATATTTTAGAATGGATTGTGCTTTAAGAATATTCCTTCCACATGTTACTTTTCGTTGTATTGATGGGATTATGCCAGGCATCAAAAGAAATCGCTGCCTCCTTTGAAGTTCTTGGAGGTTTGTGAGAAACCCCCTTATTATTATTGCCACAACATTTTATAATG
AGATGTGCTTTAAGAATATCTGTCCACATGTTACTTTTCGCTGTATTGATGGGATTATGCCAGG
>TRINITY_DN38208_c0_g1_i8 from sample A7 / Example unspliced isoform:GTCTGTTATTATTCTTTTTTGTGGATTTATTTCTAGATTCCATAGATCTATGCATATTATTTACTTGCTCTGTATTTCCAATATTGATGGTTTGTGCTTTACATTTTCAGGGGAAGCTTAATATTGATCCAGAAGTTGCTACAAAGGGAAAAGTAGATTTTGTGCAGGTGGAATCATGGGGAGATGAAGCACTAGAAGAT
TTAAAAATGAAAAGTTTCAGCCCATCTTTTACATCGTTAGATCAGGATGCTCCATTCTATGAACAACTTGTCCGTAGATTGCAGCTTTTTGAGGCAAAGGGAGACATTACAGTTGTTCAGGAAAAACCGTTGCCTCCATTTGAGAAGTGGCTGTTTGGTGAGCACAATTATCTTCAATTCCTGATGGATCAGgctcttaa
gtcagacattgaatcattgtcttcaataatgacctccaaatgtgtaaatcaaggcatagaattgccaaaggttaccactcaagccatggcatatgcaaagTATGTTGAGCGTCTAGGAAAAATTGCTGCTGTTGGAGAAAAATGGAAGGAGGCATGTCTTTGTTTGCTATCTCATATTTTTGTCGTTCATGTTGCTCACC
TCACCACAGGAATGCGAATTGGTGCCAAAGCTGTGGATTCTCTGCCATCCCTAATCGAGGCAAGAGCTATTAGTTTCTATCGTGATTATCAACAGCAAGCTGATGATCCTCTTAAAGTGTTCATGATGGCTATAAACAAAGCTGGGGACTTGATAAATTCAGAGGATGATCGTGAACAGGTCATGTCAGAACTTCCTAAA
GCCATTCAAAAAACGAGCTTGCTTCTAGCAGTTCTGGCAGTGGACTAATATGATATGCACAGCTATGACCTTGATAGTAATTTTTAGGAGATTATTGTGTTTATAATTTCTATCTTCTGTAAAACATAAAATAATATTATTGCCACAATATTTTAGAATGGATTGTGCTTTAAGAATATTCCTTCCACATGTTACTTTTC
GTTGTATTGATGGGATTATGCCAGGCATCAAAAGAAATCGCTGCCTCCTTTGAAGTTCTTGGAGGTTTGTGAGAAACCCCCTTATTATTATTGCCACAACATTTTATAATGAGATGTGCTTTAAGAATATCTGTCCACATGTTACTTTTCGCTGTATTGATGGGATTATGCCAGG