sp|Q60EX6|BSL1_ORYSJ ----> Serine/threonine-protein phosphatase BSL1 homolog
Intron 1 GTAGTGCCTT ... TGTCTTCTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 21.37 | 92 | 4 | 25 |
| A2 | 16.84 | 79 | 12 | 16 |
| A3 | 18.8 | 108 | 12 | 25 |
| A4 | 17.81 | 60 | 4 | 13 |
| A5 | 11.54 | 69 | 4 | 9 |
| A6 | 11.36 | 39 | 0 | 5 |
| A7 | 12.64 | 76 | 0 | 11 |
| A8 | 0 | 16 | 0 | 0 |
| A9 | 20.9 | 53 | 0 | 14 |
| A10 | 11.11 | 80 | 0 | 10 |
>TRINITY_DN116332_c3_g1_i1 from sample A3 / Example spliced isoformCTCGTTTACTTGGACTTTTTACCTGGGATTACAATCCGGCGTGGCCTTGGTTGGATACATTCTACGATTTGACTTTTCACTCTAGTGCGTGTGAAGTCCGGAGATATAGAGCAGGGGTTGAATCTCAGCAGAAGCCAGCAGTGCACAGAAGCGGACAGGTCCAGCGATCGATTCTCATCGCCAAGGGTTTCTGTTTGAAT
TTCTCATCAACTGCCTAGAATCTTCCAAACTCAGTATGGCCGGACCGTAAACAAGGCATGCATGATGAAGACGAGTCTTTTTGTGTTTTTCAATACGATTGGCAGAGGGAGTAGTGATTTCAGGCCGGCTCTTACATATGGTACTATCTAAGCGGGGAGGAGGAGCAACTATGGGACCGAAACCCTTGCCCGTTCCCGCG
CCGGTTCTTCCGTCTCCTTACAGACCGATCGAAGCGAGCTGGGACTCGGACGAAGACGCGCCCGGGCCGCGGTGCGGCCATACGCTGACAGCCGTTGCAGGCATTGGAAATCCGGATTCGACCGATTACGTTGGACCGAGGCTTATTCTGTTCGGCGGCGCTACTGCAATTGAAGATGGTTCCTCTGCTCTCGGTGGCGG
GATAAGATTAGCAGGTGTTACAAATGAAGTGCATGTTTACGATGTGCTTTCAAGGAAATGGAAAAGATATTCTCCTGTAGGGGAGCCTCCATCTCCAAGGGCAGCACATACTGCAACTGCAGTGGGTACAATGGTTGTCATTCAGGGTGGCATTGGTCCTGCAGGGCATTCTACTGATGACTTATATGTGCTTGATTTAA
CTCATTCAAAATTCAAATGGCATAGGGTGGTCGTGCAAGGACCTGGTCCAGGACCACGCTATGGTCATGTAATGGACTTGATTGGTCAACGATACATAGTAACTGTTAGTGGAAATGATGGGAAGCGGACCTTATCTGATGCATGGGCACTGGATACATCACAAAAGCCATACCGGTGGCAGAGGCTTGAGCCAGAAGGA
GATATGCCATCTGCACGAATGTATGCAACTGCTAGTGCGCGCCCAGATGGCATGCTGCTGCTCTGTGGAGGAAGGGATAGTACTGGTCTGCCCCAGTCGGATGCATATGGCTTGCTGAAACATAGAGATGGACGTTGGGAGTGGACTCTTGCTCCTGGAGTGTCTCCATCACCTCGGTATCAGCACGCAGCGGTCTTTGT
AGATGCAAGGTTGCATGTTTCAGGAGGTTCTCTCAGGGGAGGAAGGATGGTAGAAGGGTTTCCTGCAATTTCAGTACTTGACACTGCTGCTGGATATTGGGTTGATCGAAATGGAGTTATTTCATCTCCTCGGACAAACAAATCTAATACAGAATTTGATTCATCTTTGGATCTTCTAAAGCGATGCCGGCATGCAGCAG
CTTCTGTTGGCAATCAAATATATATATATGGTGGATTAAGAGGAGAGATTTTGCTTGATGATCTTCTAGGGTCAGAAGATACAGCAACCAGAAGGGGCACCGAAGTTAATTATTACACACTTGGACAGCCTCATAATGCGACTACAGTGGATACTGTTCCAGATGCCAACTCTTCTAATGTGCCCATCATGGACAATAAA
GGGCTTGAGACATTGGAGAAGGCATCTGCTGCTGAAGCTGAAGCAGTGAGTGCACATTTTAAAGCTGCTAGGCAAGCTGCAGCAATGGATACTGAGGGTGAGGAGAGGCCAACAGAAGAGCAGGAATCTGTTCATGAAGCAAGTGAGAGAGTTGTTGGTTCAGAGTCTCACTTGACATCTGATGTAGATGATCCTGTTGA
ATCAGATGTTCGCCTTCATCACAGAGCAGTTGTAGTTGCTAAAGAACCAGTAGGTAGCTTGGGCAGTCTAGTGCGACAACTATCTTTGGATCAATTTGAGAATGAAGGCAGGCGAATGAGCCCCTGGAATCTTGACCAAGCACATGCTGCTAAAAGGCTGCTTACCAGACAGAAGTCTCCTGTTGCTTTGCAGAAAAAGG
TCATTTCTTCTTTGCTTAGGCCTCGTAACTGGAAGCCTCCTGTAAATAGGCAATTCTTCTTGGATTCCTATGAAGTGGGTGAGCTGTGCTATACTGCAGAACAAATCTTCATGCAGGAGCCAACAGTCTTACAATTGAAGGCTCCAGTCAAAATATTTGGTGATCTTCATGGACAATTTGGTGATTTAATGCGCTTGTTT
GATGAGTATGGATTTCCGTCAACTGCAGGAGATATTACGTATATTGACTACCTCTTTTTGGGAGATTATGTTGATCGTGGACAGCACAGTTTGGAAACTATTACCTTGCTTCTTGCCCTTAAGATTGAGTATCCTGACCATGTGCATTTGATTCGGGGAAATCATGAAGCTGCTGACATCAATGCACTCTTTGGCTTCCG
ACTTGAATGCATTGAACGAATGGGAGATAGAGATGGCATATGGGCAT
>TRINITY_DN116332_c3_g1_i3 from sample A3 / Example unspliced isoform:GAATTCTTAATTGCATAAATATTCTGATATTGTATTGTTCAGAATCTCAGATAAGCATAGAATTTGGGGTGTGCTTCATGGGTTGGCTATTTGTACTATATTTTTGATGATGTTTGTTGGAACCTACAGATATTCTCCTGTAGGGGAGCCTCCATCTCCAAGGGCAGCACATACTGCAACTGCAGTGGGTACAATGGTTG
TCATTCAGgtagtgcctttaatggaaagatcatatcacacttaccggctaaacaaatctgacaaacttagaatgctttcacaattttgtcattctatcaaaattttcaacttagcattttcttgttatgcttgttgttaaggctaacaaggcaaatattgtcttctagGGTGGCATTGGTCCTGCAGGGCATTCTACTGA
TGACTTATATGTGCTTGATTTAACTCATTCAAAATTCAAATGGCATAGGGTGGTCGTGCAAGGACCTGGTCCAGGACCACGCTATGGTCATGTAATGGACTTGATTGGTCAACGATACATAGTAACTGTTAGTGGAAATGATGGGAAGCGGACCTTATCTGATGCATGGGCACTGGATACATCACAAAAGCCATACCGGT
GGCAGAGGCTTGAGCCAGAAGGAGATATGCCATCTGCACGAATGTATGCAACTGCTAGTGCGCGCCCAGATGGCATGCTGCTGCTCTGTGGAGGAAGGGATAGTACTGGTCTGCCCCAGTCGGATGCATATGGCTTGCTGAAACATAGAGATGGACGTTGGGAGTGGACTCTTGCTCCTGGAGTGTCTCCATCACCTCGG
TATCAGCACGCAGCGGTCTTTGTAGATGCAAGGTTGCATGTTTCAGGAGGTTCTCTCAGGGGAGGAAGGATGGTAGAAGGGTTTCCTGCAATTTCAGTACTTGACACTGCTGCTGGATATTGGGTTGATCGAAATGGAGTTATTTCATCTCCTCGGACAAACAAATCTAATACAGAATTTGATTCATCTTTGGATCTTCT
AAAGCGATGCCGGCATGCAGCAGCTTCTGTTGGCAATCAAATATATATATATGGTGGATTAAGAGGAGAGATTTTGCTTGATGATCTTCTAGGGTCAGAAGATACAGCAACCAGAAGGGGCACCGAAGTTAATTATTACACACTTGGACAGCCTCATAATGCGACTACAGTGGATACTGTTCCAGATGCCAACTCTTCTA
ATGTGCCCATCATGGACAATAAAGGGCTTGAGACATTGGAGAAGGCATCTGCTGCTGAAGCTGAAGCAGTGAGTGCACATTTTAAAGCTGCTAGGCAAGCTGCAGCAATGGATACTGAGGGTGAGGAGAGGCCAACAGAAGAGCAGGAATCTGTTCATGAAGCAAGTGAGAGAGTTGTTGGTTCAGAGTCTCACTTGACA
TCTGATGTAGATGATCCTGTTGAATCAGATGTTCGCCTTCATCACAGAGCAGTTGTAGTTGCTAAAGAACCAGTAGGTAGCTTGGGCAGTCTAGTGCGACAACTATCTTTGGATCAATTTGAGAATGAAGGCAGGCGAATGAGCCCCTGGAATCTTGACCAAGCACATGCTGCTAAAAGGCTGCTTACCAGACAGAAGTC
TCCTGTTGCTTTGCAGAAAAAGGTCATTTCTTCTTTGCTTAGGCCTCGTAACTGGAAGCCTCCTGTAAATAGGCAATTCTTCTTGGATTCCTATGAAGTGGGTGAGCTGTGCTATACTGCAGAACAAATCTTCATGCAGGAGCCAACAGTCTTACAATTGAAGGCTCCAGTCAAAATATTTGGTGATCTTCATGGACAAT
TTGGTGATTTAATGCGCTTGTTTGATGAGTATGGATTTCCGTCAACTGCAGGAGATATTACGTATATTGACTACCTCTTTTTGGGAGATTATGTTGATCGTGGACAGCACAGTTTGGAAACTATTACCTTGCTTCTTGCCCTTAAGATTGAGTATCCTGACCATGTGCATTTGATTCGGGGAAATCATGAAGCTGCTGAC
ATCAATGCACTCTTTGGCTTCCGACTTGAATGCATTGAACGAATGGGAGATAGAGATGGCATATGGGCAT
Intron 2 GTAGGCCGTA ... ATTTGTCCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 26.26 | 73 | 4 | 26 |
| A2 | 29.03 | 66 | 0 | 27 |
| A3 | 25.52 | 108 | 4 | 37 |
| A4 | 26.67 | 66 | 2 | 24 |
| A5 | 19.74 | 61 | 7 | 15 |
| A6 | 25 | 39 | 0 | 13 |
| A7 | 33.03 | 73 | 0 | 36 |
| A8 | 14.29 | 18 | 0 | 3 |
| A9 | 31.37 | 70 | 0 | 32 |
| A10 | 25 | 87 | 0 | 29 |
>TRINITY_DN116332_c3_g1_i1 from sample A3 / Example spliced isoformCTCGTTTACTTGGACTTTTTACCTGGGATTACAATCCGGCGTGGCCTTGGTTGGATACATTCTACGATTTGACTTTTCACTCTAGTGCGTGTGAAGTCCGGAGATATAGAGCAGGGGTTGAATCTCAGCAGAAGCCAGCAGTGCACAGAAGCGGACAGGTCCAGCGATCGATTCTCATCGCCAAGGGTTTCTGTTTGAAT
TTCTCATCAACTGCCTAGAATCTTCCAAACTCAGTATGGCCGGACCGTAAACAAGGCATGCATGATGAAGACGAGTCTTTTTGTGTTTTTCAATACGATTGGCAGAGGGAGTAGTGATTTCAGGCCGGCTCTTACATATGGTACTATCTAAGCGGGGAGGAGGAGCAACTATGGGACCGAAACCCTTGCCCGTTCCCGCG
CCGGTTCTTCCGTCTCCTTACAGACCGATCGAAGCGAGCTGGGACTCGGACGAAGACGCGCCCGGGCCGCGGTGCGGCCATACGCTGACAGCCGTTGCAGGCATTGGAAATCCGGATTCGACCGATTACGTTGGACCGAGGCTTATTCTGTTCGGCGGCGCTACTGCAATTGAAGATGGTTCCTCTGCTCTCGGTGGCGG
GATAAGATTAGCAGGTGTTACAAATGAAGTGCATGTTTACGATGTGCTTTCAAGGAAATGGAAAAGATATTCTCCTGTAGGGGAGCCTCCATCTCCAAGGGCAGCACATACTGCAACTGCAGTGGGTACAATGGTTGTCATTCAGGGTGGCATTGGTCCTGCAGGGCATTCTACTGATGACTTATATGTGCTTGATTTAA
CTCATTCAAAATTCAAATGGCATAGGGTGGTCGTGCAAGGACCTGGTCCAGGACCACGCTATGGTCATGTAATGGACTTGATTGGTCAACGATACATAGTAACTGTTAGTGGAAATGATGGGAAGCGGACCTTATCTGATGCATGGGCACTGGATACATCACAAAAGCCATACCGGTGGCAGAGGCTTGAGCCAGAAGGA
GATATGCCATCTGCACGAATGTATGCAACTGCTAGTGCGCGCCCAGATGGCATGCTGCTGCTCTGTGGAGGAAGGGATAGTACTGGTCTGCCCCAGTCGGATGCATATGGCTTGCTGAAACATAGAGATGGACGTTGGGAGTGGACTCTTGCTCCTGGAGTGTCTCCATCACCTCGGTATCAGCACGCAGCGGTCTTTGT
AGATGCAAGGTTGCATGTTTCAGGAGGTTCTCTCAGGGGAGGAAGGATGGTAGAAGGGTTTCCTGCAATTTCAGTACTTGACACTGCTGCTGGATATTGGGTTGATCGAAATGGAGTTATTTCATCTCCTCGGACAAACAAATCTAATACAGAATTTGATTCATCTTTGGATCTTCTAAAGCGATGCCGGCATGCAGCAG
CTTCTGTTGGCAATCAAATATATATATATGGTGGATTAAGAGGAGAGATTTTGCTTGATGATCTTCTAGGGTCAGAAGATACAGCAACCAGAAGGGGCACCGAAGTTAATTATTACACACTTGGACAGCCTCATAATGCGACTACAGTGGATACTGTTCCAGATGCCAACTCTTCTAATGTGCCCATCATGGACAATAAA
GGGCTTGAGACATTGGAGAAGGCATCTGCTGCTGAAGCTGAAGCAGTGAGTGCACATTTTAAAGCTGCTAGGCAAGCTGCAGCAATGGATACTGAGGGTGAGGAGAGGCCAACAGAAGAGCAGGAATCTGTTCATGAAGCAAGTGAGAGAGTTGTTGGTTCAGAGTCTCACTTGACATCTGATGTAGATGATCCTGTTGA
ATCAGATGTTCGCCTTCATCACAGAGCAGTTGTAGTTGCTAAAGAACCAGTAGGTAGCTTGGGCAGTCTAGTGCGACAACTATCTTTGGATCAATTTGAGAATGAAGGCAGGCGAATGAGCCCCTGGAATCTTGACCAAGCACATGCTGCTAAAAGGCTGCTTACCAGACAGAAGTCTCCTGTTGCTTTGCAGAAAAAGG
TCATTTCTTCTTTGCTTAGGCCTCGTAACTGGAAGCCTCCTGTAAATAGGCAATTCTTCTTGGATTCCTATGAAGTGGGTGAGCTGTGCTATACTGCAGAACAAATCTTCATGCAGGAGCCAACAGTCTTACAATTGAAGGCTCCAGTCAAAATATTTGGTGATCTTCATGGACAATTTGGTGATTTAATGCGCTTGTTT
GATGAGTATGGATTTCCGTCAACTGCAGGAGATATTACGTATATTGACTACCTCTTTTTGGGAGATTATGTTGATCGTGGACAGCACAGTTTGGAAACTATTACCTTGCTTCTTGCCCTTAAGATTGAGTATCCTGACCATGTGCATTTGATTCGGGGAAATCATGAAGCTGCTGACATCAATGCACTCTTTGGCTTCCG
ACTTGAATGCATTGAACGAATGGGAGATAGAGATGGCATATGGGCAT
>TRINITY_DN116332_c3_g1_i4 from sample A3 / Example unspliced isoform:GTAACTGTTAGTGGAAATGATGgtaggccgtaataacttgaaattgtttcatgtgattttgaatactttttaagtttcttgaagaactctgtagtttgagaatgccacataaagcacatctttcttgttacagcttcattgtcatatgactgttggttttagagctatgatgttaaaatcaacatttgtccagGGAAGCG
GACCTTATCTGATGCATGGGCACTGGATACATCACAAAAGCCATACCGGTGGCAGAGGCTTGAGCCAGAAGGAGATATGCCATCTGCACGAATGTATGCAACTGCTAGTGCGCGCCCAGATGGCATGCTGCTGCTCTGTGGAGGAAGGGATAGTACTGGTCTGCCCCAGTCGGATGCATATGGCTTGCTGAAACATAGAG
ATGGACGTTGGGAGTGGACTCTTGCTCCTGGAGTGTCTCCATCACCTCGGTATCAGCACGCAGCGGTCTTTGTAGATGCAAGGTTGCATGTTTCAGGAGGTTCTCTCAGGGGAGGAAGGATGGTAGAAGGGTTTCCTGCAATTTCAGTACTTGACACTGCTGCTGGATATTGGGTTGATCGAAATGGAGTTATTTCATCT
CCTCGGACAAACAAATCTAATACAGAATTTGATTCATCTTTGGATCTTCTAAAGCGATGCCGGCATGCAGCAGCTTCTGTTGGCAATCAAATATATATATATGGTGGATTAAGAGGAGAGATTTTGCTTGATGATCTTCTAGGGTCAGAAGATACAGCAACCAGAAGGGGCACCGAAGTTAATTATTACACACTTGGACA
GCCTCATAATGCGACTACAGTGGATACTGTTCCAGATGCCAACTCTTCTAATGTGCCCATCATGGACAATAAAGGGCTTGAGACATTGGAGAAGGCATCTGCTGCTGAAGCTGAAGCAGTGAGTGCACATTTTAAAGCTGCTAGGCAAGCTGCAGCAATGGATACTGAGGGTGAGGAGAGGCCAACAGAAGAGCAGGAAT
CTGTTCATGAAGCAAGTGAGAGAGTTGTTGGTTCAGAGTCTCACTTGACATCTGATGTAGATGATCCTGTTGAATCAGATGTTCGCCTTCATCACAGAGCAGTTGTAGTTGCTAAAGAACCAGTAGGTAGCTTGGGCAGTCTAGTGCGACAACTATCTTTGGATCAATTTGAGAATGAAGGCAGGCGAATGAGCCCCTGG
AATCTTGACCAAGCACATGCTGCTAAAAGGCTGCTTACCAGACAGAAGTCTCCTGTTGCTTTGCAGAAAAAGGTCATTTCTTCTTTGCTTAGGCCTCGTAACTGGAAGCCTCCTGTAAATAGGCAATTCTTCTTGGATTCCTATGAAGTGGGTGAGCTGTGCTATACTGCAGAACAAATCTTCATGCAGGAGCCAACAGT
CTTACAATTGAAGGCTCCAGTCAAAATATTTGGTGATCTTCATGGACAATTTGGTGATTTAATGCGCTTGTTTGATGAGTATGGATTTCCGTCAACTGCAGGAGATATTACGTATATTGACTACCTCTTTTTGGGAGATTATGTTGATCGTGGACAGCACAGTTTGGAAACTATTACCTTGCTTCTTGCCCTTAAGATTG
AGTATCCTGACCATGTGCATTTGATTCGGGGAAATCATGAAGCTGCTGACATCAATGCACTCTTTGGCTTCCGACTTGAATGCATTGAACGAATGGGAGATAGAGATGGCATATGGGCAT