sp|Q8RXP6|WAV2_ARATH ----> Alpha/beta hydrolase domain-containing protein WAV2
Intron 1 GTACTATTTT ... TCCAATGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 18.09 | 103 | 10.3 | 24.3 |
| A2 | 17.68 | 96.9 | 10.7 | 23.3 |
| A3 | 15.27 | 97 | 12.3 | 19 |
| A4 | 18.38 | 81 | 8 | 20 |
| A5 | 18.18 | 48 | 4.7 | 12 |
| A6 | 18.6 | 204.4 | 14.7 | 52.7 |
| A7 | 19.19 | 311.9 | 35.3 | 84 |
| A8 | 16.46 | 299 | 30 | 65.3 |
| A9 | 16.33 | 335.9 | 34.7 | 72.7 |
| A10 | 16.06 | 249 | 29.3 | 52.7 |
>TRINITY_DN125865_c2_g1_i4 from sample A1 / Example spliced isoformTATTTCGCCATTGCGTTTATGGAAAATCACTGAAACGATTCTCATGATGCAGGGGCGGTTTGGTTAGAGAGGATCGTATATTTACCTTTTCAGTCTCTGGAAAGAATTTAAGACGGAGAAATAAAGAATAAAGACCCACACACATAAACGCATCGGTGTTCACGTCCATGACCAGGAACGACAAATAAAGCCTTCACATC
GCCTCTGTGGTTTCGAAATCAAACAGACAGCAAAGAAAAAGGAGGATTGACGTTGGCTGGGACGTCCAAGGTTTTTGCGCATCTTTCTGCAGGAAATTGATGGACCAGCTCGTGAATTTCGTCATCCGTCCTCCCAGAGCTGAATATAGTCCCACACATGACTTATTAGAGCAGGAGTTTGTTCTTAAAGGACGCACATT
TCGGCGCAAAGATTTGGAGGTCATTAATGAACATGGGAATGTCTTGAAGTGCAGCCATTACATGCCACACCCAATACCTGAATCCAGAGCATTACCATGTGTAATTTACTGCCATGGAAACAGTGGATGCAGAGCAGATGCCAGTGAAGCCGTCATGATTTTGCTTCCTGCGTATATTACAGTGTTCACCCTTGATTTTT
CTGGCTCTGGACTATCGGATGGAGAATATGTCACTTTGGGGTGGAGGGAGAAGGATGATTTAAAGGCAGTCGTCAATTTTTTGCGAACAGATGAACAAGTTTCATTGATTGGTTTGTGGGGTCGATCAATGGGGGCTGTAACAAGCTTGATGTATGGTGCTGAAGATCCGTCAATTGCAGGGATGGTTCTTGATAGTCCT
TTTGCAAATTTGGTTGATCTGATGATGGAGCTGGTTGATGTGTACAAGATCCGCCTTCCAAAATTTACTGTTAAAGTTGCTGTTCAATATATGCGAAAGGTGATTCAGAAGAAGGCTCACTTTGATATCATGGATCTTGATGTTGTTAAGATGGCAACAAAGTCTTTTATTCCTGCATTATTTGGACATGGCACGGAGGA
CCTTTTTATCCAACCTCATCATTCAGATCTCATATACAACTCGTATGCTGGTGACAAAAACATCATCAAGTTTGAGGGTGACCACAACTCTCCACGACCTCCATTCTATTATGATTCAATAAGCATTTTCTTCCATAATGTTTTGCATCCTCCAGATGATTTGATTGAGCAGCATGCTTCTGAAAGTTTGTATGAATACT
TTGATGGATTAGAAAATCTGGATGAGAATGTGTTGCATGAAATTATTGGAGGTCCAAGATCTAGACAAAATGATACCACTGAAGATGCCATTGATCCTTTTCTCTCTAGGTGGCAAATGAGCAGAACTGAGGTGCCTTTTGAATTTGCAGACAATTCTGAAAAAACTCTAGGTGTCATCGATGCAGGGGAGCTAAGTGGA
TGGGAGAGAAAAGAAGAGAAAAACAATGATGAGGGTTCATCCAATAAATGCGATAATACGAGTGAGAGCATCTTTGACAGAAATTGCCTTGATACTGTAGCAGCACTTCCCACAAGCAACCAAGTTACAGATTCTTCTTTGAATAGATTTGCTCAATTTCCACTTTCAGTAGATGATGAAGAAAGGATGGTCATGGAAGC
AATCACTGCCTCCCTTCGGGATCTGGAAACTGGAAAAGTTTCTCAAAATCAAATCTGCCAAAGTTCAGATACTACATCCAGTCATAAAGATTCAGAAACAACTTTTCGAGACATTTCTAGTGGCCCTGAAAAAACATTTTCACAGGCCACAACTTCTGAAATAATGATATCACCATTTATGGATAGTTCTCAAAAACAAT
ATGCTTCACCTGAAAGGGTCAAAGCACAAACAGAGACTTTCTCTCACTCATCTTCCGCAAAGAACAAATCAACTAGCATATCAGAGGCAAGCCACCAACAGGGTAGTTTTTTCCATAATGGCCAATAACAACAGCTGCAACTAATCAGTTTGTCTATGATTGCAATATACTTGTAATGGTGAACCGTTAAACCTAGCAAA
CAATGCAGCAATGCAGCAGTATTTGTATGTACATTATCAATTTGTTCAGTGTATTTTGTATTTACTATCTATGATCAATTGTAAATTATGGCCTATTGGGGTCTAGCAATTTCATGTTGCTCATTGTTGACATTATTTTAATTTCAGAGCTTCCAATCCAGGGTATTGGCTTGATTCTTTTAGAAAGACACAAAACAGGT
ATGTGGAACCAGTGCGGAATTATATATTTGAACCCTGCACTTACCACATCCTGTGACAATTGTTTCACTGTGTATTAAGATGCTATTTCATGATACTGTGTTGATAATCTGTTGCAATTATCTATAATTGGAATGGTTCAACATGGAAACATTTGCACGCTGTGCTGGACAAATCTGCGGGAAAGTTGTTCCAGTAAACA
GCAATATGTAAAGACATGTCCTTGGAGAAATGTTGTTGAAGGAAAATGTGCCCATAATTTGCTTGTGGGTCCTATTCTGATGGCAATCCAAGTATGTCGACATCATTTGGACACTTCCTACCATTTTCCTCATGATGCGATGCTTTTACAAAATTATTTTTCTGGTCTGTTAGGTGATGAGTAAGATAACTGTATTATGC
TGCTCATTTATTAAAGAGTTTAATTTCATT
>TRINITY_DN125865_c2_g1_i1 from sample A1 / Example unspliced isoform:AGGTCCAAGATCTAGACAAAATGgtactattttgtctgaacaacccaatggtgttgagtgttgacatccacatcaacatgatggtgtttgcttttggtttctctctatagttagtattcttataaatctttctgcttttatgttgcttgtttataagcattttactttaaatttttatccaatgcagATACCACTGAAGA
TGCCATTGATCCTTTTCTCTCTAGGTGGCAAATGAGCAGAACTGAGGTGGGTTACTTGCATATTCCCTTGGAGCATTTTTTTTGCTTCTTATTTGAAGCATATACAAATAAGTTTTGGTTAAAGATAATATGGTGACCACTGGATATGCAGGTGAATATCCAACATCAAATAACATCTATATGAGACAAGTTGTATTATT
CTTAATGCACTCTTAAATTTTTTCTAAATCATGGATATTGTTCTTCAGTAACAATGAACTTGCTTCCTTGATTTCCATTATTGAGTCCAGCCAAAGTTACAAGAAGCTAGGGTGTGTGTAGACTATCCCTAAAATTGTGGAATCAAGTATGTGGCAAAATAGACTAAAAAAATAATAGAAAAAATTGAAAAAAGAGAAAA
GATAAGTTTAATAGACATTGGAAAACATATCATGATTGTTGCTAAATAGATTAAAATTCATACTATGCAACTTCGAAGTCCATAACTAGTGCAACCGTTGCCTTTGCGTATCTTTTGAATCCACATTAGACAGTTAGTATATAGACACAAACAATGTTGCTGTTACAGCCCCGTAGAAATAATGCAGACCAAGTACATAG
AATAATTGCACAGAAAGTACAAATCTATATATCATGAAATATGAGTAATGATTGATGATCCAAATACAGTGCAACTGAATGTTATAAATACAAGTGAAGAGTTGAGTCACATGACTCTTGGTAAAAGGTGAGCCG
Intron 2 GTGCTAGCTT ... CTTGTGGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 35.15 | 143.4 | 18 | 83.2 |
| A2 | 34.17 | 93.5 | 24 | 51.4 |
| A3 | 30.91 | 114.4 | 30 | 53.8 |
| A4 | 30.82 | 76.9 | 21.1 | 36.2 |
| A5 | 29.8 | 59.4 | 12 | 26.5 |
| A6 | 33.06 | 308 | 47 | 161.7 |
| A7 | 32.86 | 482.5 | 65.6 | 251.5 |
| A8 | 30.46 | 399.6 | 88 | 183.5 |
| A9 | 31.4 | 414.6 | 72 | 201.2 |
| A10 | 33.44 | 295.2 | 44 | 158.1 |
>TRINITY_DN125865_c2_g1_i2 from sample A1 / Example spliced isoformCAAAGCTACAGTTCATAGATCAAAAAATGCTTGAGATTAAAACAATTTTTATATGTTGCCAGAAAAGCTTGAGTTGTCAATTTTGCACCTGAATTTATAGCAGGTATAGCAATATCTCTAATTATTCTAATTGTTGTAAACATCTTCAGGTGCCTTTTGAATTTGCAGACAATTCTGAAAAAACTCTAGGTGTCATCGAT
GCAGGGGAGCTAAGTGGATGGGAGAGAAAAGAAGAGAAAAACAATGATGAGGGTTCATCCAATAAATGCGATAATACGAGTGAGAGCATCTTTGACAGAAATTGCCTTGATACTGTAGCAGCACTTCCCACAAGCAACCAAGTTACAGATTCTTCTTTGAATAGATTTGCTCAATTTCCACTTTCAGTAGATGATGAAGA
AAGGATGGTCATGGAAGCAATCACTGCCTCCCTTCGGGATCTGGAAACTGGAAAAGTTTCTCAAAATCAAATCTGCCAAAGTTCAGATACTACATCCAGTCATAAAGATTCAGAAACAACTTTTCGAGACATTTCTAGTGGCCCTGAAAAAACATTTTCACAGGCCACAACTTCTGAAATAATGATATCACCATTTATGG
ATAGTTCTCAAAAACAATATGCTTCACCTGAAAGGGTCAAAGCACAAACAGAGACTTTCTCTCACTCATCTTCCGCAAAGAACAAATCAACTAGCATATCAGAGGCAAGCCACCAACAGGGTAGTTTTTTCCATAATGGCCAATAACAACAGCTGCAACTAATCAGTTTGTCTATGATTGCAATATACTTGTAATGGTGA
ACCGTTAAACCTAGCAAACAATGCAGCAATGCAGCAGTATTTGTATGTACATTATCAATTTGTTCAGTGTATTTTGTATTTACTATCTATGATCAATTGTAAATTATGGCCTATTGGGGTCTAGCAATTTCATGTTGCTCATTGTTGACATTATTTTAATTTCAGAGCTTCCAATCCAGGGTATTGGCTTGATTCTTTTA
GAAAGACACAAAACAGGTATGTGGAACCAGTGCGGAATTATATATTTGAACCCTGCACTTACCACATCCTGTGACAATTGTTTCACTGTGTATTAAGATGCTATTTCATGATACTGTGTTGATAATCTGTTGCAATTATCTATAATTGGAATGGTTCAACATGGAAACATTTGCACGCTGTGCTGGACAAATCTGCGGGA
AAGTTGTTCCAGTAAACAGCAATATGTAAAGACATGTCCTTGGAGAAATGTTGTTGAAGGAAAATGTGCCCATAATTTGCTTGTGGGTCCTATTCTGATGGCAATCCAAGTATGTCGACATCATTTGGACACTTCCTACCATTTTCCTCATGATGCGATGCTTTTACAAAATTATTTTTCTGGTCTGTTAGGTGATGAGT
AAGATAACTGTATTATGCTGCTCATTTATTAAAGAGTTTAATTTCATT
>TRINITY_DN125865_c2_g1_i7 from sample A1 / Example unspliced isoform:GATACCACTGAAGATGCCATTGATCCTTTTCTCTCTAGGTGGCAAATGAGCAGAACTGAGGTGCCTTTTGAATTTGCAGACAATTCTGAAAAAACTCTAGGTGTCATCGATGCAGGGGAGCTAAGTGGATGGGAGgtgctagcttcaaactcttatgatcctgatgttgaaatatgtagcagcgagtcttgatattatga
ttatgcttccaccatgactaaattcatacattcataaattgcttattatgatatagatactagagagtttcttaattatagactgcttaaagttcttgatagattgatggagctacagaaggcactgggtggcctgttttatttctattaagcatgctactgtaatagtaatttttcattcacttacatttgtcttgtgg
cagAGAAAAGAAGAGAAAAACAATGATGAGGGTTCATCCAATAAATGCGATAATACGAGTGAGAGCATCTTTGACAGAAATTGCCTTGATACTGTAGCAGCACTTCCCACAAGCAACCAAGTTACAGATTCTTCTTTGAATAGATTTGCTCAATTTCCACTTTCAGTAGATGATGAAGAAAGGATGGTCATGGAAGCAAT
CACTGCCTCCCTTCGGGATCTGGAAACTGGAAAAGTTTCTCAAAATCAAATCTGCCAAAGTTCAGATACTACATCCAGTCATAAAGATTCAGAAACAACTTTTCGAGACATTTCTAGTGGCCCTGAAAAAACATTTTCACAGGCCACAACTTCTGAAATAATGATATCACCATTTATGGATAGTTCTCAAAAACAATATG
CTTCACCTGAAAGGGTCAAAGCACAAACAGAGACTTTCTCTCACTCATCTTCCGCAAAGAACAAATCAACTAGCATATCAGAGGCAAGCCACCAACAGGGTAGTTTTTTCCATAATGGCCAATAACAACAGCTGCAACTAATCAGTTTGTCTATGATTGCAATATACTTGTAATGGTGAACCGTTAAACCTAGCAAACAA
TGCAGCAATGCAGCAGTATTTGTATGTACATTATCAATTTGTTCAGTGTATTTTGTATTTACTATCTATGATCAATTGTAAATTATGGCCTATTGGGGTCTAGCAATTTCATGTTGCTCATTGTTGACATTATTTTAATTTCAGAGCTTCCAATCCAGGGTATTGGCTTGATTCTTTTAGAAAGACACAAAACAGGTATG
TGGAACCAGTGCGGAATTATATATTTGAACCCTGCACTTACCACATCCTGTGACAATTGTTTCACTGTGTATTAAGATGCTATTTCATGATACTGTGTTGATAATCTGTTGCAATTATCTATAATTGGAATGGTTCAACATGGAAACATTTGCACGCTGTGCTGGACAAATCTGCGGGAAAGTTGTTCCAGTAAACAGCA
ATATGTAAAGACATGTCCTTGGAGAAATGTTGTTGAAGGAAAATGTGCCCATAATTTGCTTGTGGGTCCTATTCTGATGGCAATCCAAGTATGTCGACATCATTTGGACACTTCCTACCATTTTCCTCATGATGCGATGCTTTTACAAAATTATTTTTCTGGTCTGTTAGGTGATGAGTAAGATAACTGTATTATGCTGC
TCATTTATTAAAGAGTTTAATTTCATT
Intron 3 GTGACCACAA ... CATCCTCCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 63.39 | 55.8 | 119 | 65 |
| A2 | 65.35 | 26.7 | 52 | 47 |
| A3 | 61.57 | 43.2 | 82 | 52 |
| A4 | 73.03 | 34.8 | 108 | 76 |
| A5 | 62.53 | 21.5 | 39 | 30 |
| A6 | 65.86 | 58.9 | 125 | 95 |
| A7 | 62.38 | 121.7 | 216 | 177 |
| A8 | 65.58 | 108.8 | 219 | 184.9 |
| A9 | 64.1 | 114.2 | 206 | 194 |
| A10 | 67.45 | 85 | 174 | 172 |
>TRINITY_DN125865_c2_g1_i3 from sample A1 / Example spliced isoformTATTTCGCCATTGCGTTTATGGAAAATCACTGAAACGATTCTCATGATGCAGGGGCGGTTTGGTTAGAGAGGATCGTATATTTACCTTTTCAGTCTCTGGAAAGAATTTAAGACGGAGAAATAAAGAATAAAGACCCACACACATAAACGCATCGGTGTTCACGTCCATGACCAGGAACGACAAATAAAGCCTTCACATC
GCCTCTGTGGTTTCGAAATCAAACAGACAGCAAAGAAAAAGGAGGATTGACGTTGGCTGGGACGTCCAAGGTTTTTGCGCATCTTTCTGCAGGAAATTGATGGACCAGCTCGTGAATTTCGTCATCCGTCCTCCCAGAGCTGAATATAGTCCCACACATGACTTATTAGAGCAGGAGTTTGTTCTTAAAGGACGCACATT
TCGGCGCAAAGATTTGGAGGTCATTAATGAACATGGGAATGTCTTGAAGTGCAGCCATTACATGCCACACCCAATACCTGAATCCAGAGCATTACCATGTGTAATTTACTGCCATGGAAACAGTGGATGCAGAGCAGATGCCAGTGAAGCCGTCATGATTTTGCTTCCTGCGTATATTACAGTGTTCACCCTTGATTTTT
CTGGCTCTGGACTATCGGATGGAGAATATGTCACTTTGGGGTGGAGGGAGAAGGATGATTTAAAGGCAGTCGTCAATTTTTTGCGAACAGATGAACAAGTTTCATTGATTGGTTTGTGGGGTCGATCAATGGGGGCTGTAACAAGCTTGATGTATGGTGCTGAAGATCCGTCAATTGCAGGGATGGTTCTTGATAGTCCT
TTTGCAAATTTGGTTGATCTGATGATGGAGCTGGTTGATGTGTACAAGATCCGCCTTCCAAAATTTACTGTTAAAGTTGCTGTTCAATATATGCGAAAGGTGATTCAGAAGAAGGCTCACTTTGATATCATGGATCTTGATGTTGTTAAGATGGCAACAAAGTCTTTTATTCCTGCATTATTTGGACATGGCACGGAGGA
CCTTTTTATCCAACCTCATCATTCAGATCTCATATACAACTCGTATGCTGGTGACAAAAACATCATCAAGTTTGAGGATGATTTGATTGAGCAGCATGCTTCTGAAAGTTTGTATGAATACTTTGATGGATTAGAAAATCTGGATGAGAATGTGTTGCATGAAATTATTGGAGGTCCAAGATCTAGACAAAATGATACCA
CTGAAGATGCCATTGATCCTTTTCTCTCTAGGTGGCAAATGAGCAGAACTGAGGTGCCTTTTGAATTTGCAGACAATTCTGAAAAAACTCTAGGTGTCATCGATGCAGGGGAGCTAAGTGGATGGGAGAGAAAAGAAGAGAAAAACAATGATGAGGGTTCATCCAATAAATGCGATAATACGAGTGAGAGCATCTTTGAC
AGAAATTGCCTTGATACTGTAGCAGCACTTCCCACAAGCAACCAAGTTACAGATTCTTCTTTGAATAGATTTGCTCAATTTCCACTTTCAGTAGATGATGAAGAAAGGATGGTCATGGAAGCAATCACTGCCTCCCTTCGGGATCTGGAAACTGGAAAAGTTTCTCAAAATCAAATCTGCCAAAGTTCAGATACTACATC
CAGTCATAAAGATTCAGAAACAACTTTTCGAGACATTTCTAGTGGCCCTGAAAAAACATTTTCACAGGCCACAACTTCTGAAATAATGATATCACCATTTATGGATAGTTCTCAAAAACAATATGCTTCACCTGAAAGGGTCAAAGCACAAACAGAGACTTTCTCTCACTCATCTTCCGCAAAGAACAAATCAACTAGCA
TATCAGAGGCAAGCCACCAACAGGGTAGTTTTTTCCATAATGGCCAATAACAACAGCTGCAACTAATCAGTTTGTCTATGATTGCAATATACTTGTAATGGTGAACCGTTAAACCTAGCAAACAATGCAGCAATGCAGCAGTATTTGTATGTACATTATCAATTTGTTCAGTGTATTTTGTATTTACTATCTATGATCAA
TTGTAAATTATGGCCTATTGGGGTCTAGCAATTTCATGTTGCTCATTGTTGACATTATTTTAATTTCAGAGCTTCCAATCCAGGGTATTGGCTTGATTCTTTTAGAAAGACACAAAACAGGTATGTGGAACCAGTGCGGAATTATATATTTGAACCCTGCACTTACCACATCCTGTGACAATTGTTTCACTGTGTATTAA
GATGCTATTTCATGATACTGTGTTGATAATCTGTTGCAATTATCTATAATTGGAATGGTTCAACATGGAAACATTTGCACGCTGTGCTGGACAAATCTGCGGGAAAGTTGTTCCAGTAAACAGCAATATGTAAAGACATGTCCTTGGAGAAATGTTGTTGAAGGAAAATGTGCCCATAATTTGCTTGTGGGTCCTATTCT
GATGGCAATCCAAGTATGTCGACATCATTTGGACACTTCCTACCATTTTCCTCATGATGCGATGCTTTTACAAAATTATTTTTCTGGTCTGTTAGGTGATGAGTAAGATAACTGTATTATGCTGCTCATTTATTAAAGAGTTTAATTTCATT
>TRINITY_DN125865_c2_g1_i5 from sample A1 / Example unspliced isoform:CAAGTATTGCTTAAATCCATGGAAGCTACAATATAGGAATCAACCATAGAAATGAATTAATTTGACCGATCCTTGTTGCTTGTAATGACTGAGTCTGGAAACTGTGCAGGTCATTAATGAACATGGGAATGTCTTGAAGTGCAGCCATTACATGCCACACCCAATACCTGAATCCAGAGCATTACCATGTGTAATTTACT
GCCATGGAAACAGTGGATGCAGAGCAGATGCCAGTGAAGCCGTCATGATTTTGCTTCCTGCGTATATTACAGTGTTCACCCTTGATTTTTCTGGCTCTGGACTATCGGATGGAGAATATGTCACTTTGGGGTGGAGGGAGAAGGATGATTTAAAGGCAGTCGTCAATTTTTTGCGAACAGATGAACAAGTTTCATTGATT
GGTTTGTGGGGTCGATCAATGGGGGCTGTAACAAGCTTGATGTATGGTGCTGAAGATCCGTCAATTGCAGGGATGGTTCTTGATAGTCCTTTTGCAAATTTGGTTGATCTGATGATGGAGCTGGTTGATGTGTACAAGATCCGCCTTCCAAAATTTACTGTTAAAGTTGCTGTTCAATATATGCGAAAGGTGATTCAGAA
GAAGGCTCACTTTGATATCATGGATCTTGATGTTGTTAAGATGGCAACAAAGTCTTTTATTCCTGCATTATTTGGACATGGCACGGAGGACCTTTTTATCCAACCTCATCATTCAGATCTCATATACAACTCGTATGCTGGTGACAAAAACATCATCAAGTTTGAGGgtgaccacaactctccacgacctccattctatt
atgattcaataagcattttcttccataatgttttgcatcctccagATGATTTGATTGAGCAGCATGCTTCTGAAAGTTTGTATGAATACTTTGATGGATTAGAAAATCTGGATGAGAATGTGTTGCATGAAATTATTGGAGGTCCAAGATCTAGACAAAATGATACCACTGAAGATGCCATTGATCCTTTTCTCTCTAGG
TGGCAAATGAGCAGAACTGAGGTGCCTTTTGAATTTGCAGACAATTCTGAAAAAACTCTAGGTGTCATCGATGCAGGGGAGCTAAGTGGATGGGAGAGAAAAGAAGAGAAAAACAATGATGAGGGTTCATCCAATAAATGCGATAATACGAGTGAGAGCATCTTTGACAGAAATTGCCTTGATACTGTAGCAGCACTTCC
CACAAGCAACCAAGTTACAGATTCTTCTTTGAATAGATTTGCTCAATTTCCACTTTCAGTAGATGATGAAGAAAGGATGGTCATGGAAGCAATCACTGCCTCCCTTCGGGATCTGGAAACTGGAAAAGTTTCTCAAAATCAAATCTGCCAAAGTTCAGATACTACATCCAGTCATAAAGATTCAGAAACAACTTTTCGAG
ACATTTCTAGTGGCCCTGAAAAAACATTTTCACAGGCCACAACTTCTGAAATAATGATATCACCATTTATGGATAGTTCTCAAAAACAATATGCTTCACCTGAAAGGGTCAAAGCACAAACAGAGACTTTCTCTCACTCATCTTCCGCAAAGAACAAATCAACTAGCATATCAGAGGCAAGCCACCAACAGGGTAGTTTT
TTCCATAATGGCCAATAACAACAGCTGCAACTAATCAGTTTGTCTATGATTGCAATATACTTGTAATGGTGAACCGTTAAACCTAGCAAACAATGCAGCAATGCAGCAGTATTTGTATGTACATTATCAATTTGTTCAGTGTATTTTGTATTTACTATCTATGATCAATTGTAAATTATGGCCTATTGGGGTCTAGCAAT
TTCATGTTGCTCATTGTTGACATTATTTTAATTTCAGAGCTTCCAATCCAGGGTATTGGCTTGATTCTTTTAGAAAGACACAAAACAGGTATGTGGAACCAGTGCGGAATTATATATTTGAACCCTGCACTTACCACATCCTGTGACAATTGTTTCACTGTGTATTAAGATGCTATTTCATGATACTGTGTTGATAATCT
GTTGCAATTATCTATAATTGGAATGGTTCAACATGGAAACATTTGCACGCTGTGCTGGACAAATCTGCGGGAAAGTTGTTCCAGTAAACAGCAATATGTAAAGACATGTCCTTGGAGAAATGTTGTTGAAGGAAAATGTGCCCATAATTTGCTTGTGGGTCCTATTCTGATGGCAATCCAAGTATGTCGACATCATTTGG
ACACTTCCTACCATTTTCCTCATGATGCGATGCTTTTACAAAATTATTTTTCTGGTCTGTTAGGTGATGAGTAAGATAACTGTATTATGCTGCTCATTTATTAAAGAGTTTAATTTCATT
Intron 4 GTATGTACAT ... TTAATTTCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 65.67 | 23 | 49 | 39 |
| A2 | 69.41 | 13 | 31 | 28 |
| A3 | 51.2 | 37 | 48.6 | 29 |
| A4 | 52.81 | 21 | 31 | 16 |
| A5 | 73.58 | 5.2 | 20 | 9 |
| A6 | 57.31 | 131 | 200 | 151.8 |
| A7 | 57.86 | 146 | 243 | 158 |
| A8 | 56.88 | 278.6 | 444 | 290.9 |
| A9 | 57.22 | 178.6 | 261.3 | 216.6 |
| A10 | 57.17 | 108 | 150.3 | 138 |
>TRINITY_DN118591_c0_g1_i9 from sample A3 / Example spliced isoformATTGCGTTTATGGAAAAGCACTGAAACGATTCTCATGATGCAGGGGCGGTTTGGTTAGAGAGGATCGTATATTTACCTTTTCAGTCTCTGGAAAGAATTTAAGACGGAGAAATAAAGAATAAAGACCCACACACATAAACGCATCGGTGTTCACGTCCATGACCAGGAACGACAAATAAAGCCTTCACATCGCCTCTGTG
GTTTCGAAATCAAACAGACAGCAAAGAAAAAGGAGGATTGACGTTGGCTGGGACGTCCAAGGTTTTTGCGCATCTTTCTGCAGGAAATTGATGGACCAGCTCGTGAATTTCGTCATCCGTCCTCCCAGAGCTGAATATAGTCCCACACATGACTTATTAGAGCAGGAGTTTGTTCTTAAAGGACGCACATTTCGGCGCAA
AGATTTGGAGGTCATTAATGAACATGGGCATGTCTTGAAGTGCAGCCATTACATGCCACACCCAATACCTGAATCCAGAGCATTACCATGTGTAATTTACTGCCATGGAAACAGAGCTTGATGTATGGTGCTGAAGATCCGTCAATTGCAGGGATGGTTCTTGATAGTCCTTTTGCAAATTTGGTTGATCTGATGATGGA
GCTGGTTGATGTGTACAAGATCCGCCTTCCAAAATTTACTTGGATGCAGAGCAGATGCCAGTGAAGCCGTCATGATTTTGCTTCCTGCGTATATTACAGTGTTCACCCTTGATTTTTCTGGCTCTGGACTATCAGATGGAGAATATGTCACTTTGGGGTGGAGGGAGAAGGATGATTTAAAGGCAGTCGTCAATTTTTTG
CGAACAGATGAACAAGTTTCATTGATTGGTTTGTGGGGTCGATCAATGGGGGCTGTAACAAGCTTGATGTATGGTGCTGAAGATCCGTCAATTGCAGGGATGGTTCTTGATAGTCCTTTTGCAAATTTGGTTGATCTGATGATGGAGCTGGTTGATGTGTACAAGATCCGCCTTCCAAAATTTACTGTTAAAGTTGCTGT
TCAATATATGCGAAAGGTGATTCAGAAGAAGGCTCACTTTGATATCATGGATCTTGATGTTGTTAAGATGGCAACAAAGTCTTTTATTCCTGCATTATTTGGACATGGCACGGAGGACCTTTTTATCCAACCTCATCATTCAGATCTCATATACAACTCGTATGCTGGTGACAAAAACATCATCAAGTTTGAGGATGATT
TGATTGAGCAGCATGCTTCTGAAAGTTTGTATGAATACTTCGATGGATTAGAAAATCTGGATGAGAATGTGTTGCATGAAATTATTGGAGGTCCAAGATCTAGACAAAATGATACCACTGAAGATGCCATTGATCCTTTTCTCTCTAGGTGGCAAATGAGCAGAACTGAGGTGCCTTTTGAATTTGCAGACAATTCTGAA
AAAACTCTAGGTGTCATCGATGCAGGGGAGCTAAGTGGATGGGAGAGAAAAGAAGAGAAAAACAATGATGAGGGTTCATCCAATAAATGCGATAATACGAGTGAGAGCATCTTTGACAGAAATTGCCTTGATACTGTAGCAGCACTTCCCACAAGCAACCAAGTTACAGATTCTTCTTTGAATAGATTTGCTCAATTTCC
ACTTTCAGTAGATGATGAAGAAAGGATGGTCATGGAAGCAATCACTGCCTCCCTTCGGGATCTGGAAACTGAAAAAGTTTCTCAAAATCAAATCTGCCAAAGTTCAGATACTACATCCAGTCATAAAGATTCAGAAACAACTTTTCGAGACATTTCTAGTGGCCCTGAAAAAACATTTTCACAGGCCACAACTTCTGAAA
TAATGATATCACCATTTATGGATAGTTCTCAAAAACAATATGCTTCACCTGAAAGGGTCAAAGCACAAACAGAGACTTTCTCTCACTCATCTTCCGCAAAGAACAAATCAACTAGCATATCAGAGGCAAGCCACCAACAGGGTAGTTTTTTCCATAATGGCCAATAACAACAGCTGCAACTAATCAGTTTGTCTATGATT
GCAATATACTTGTAATGGTGAACCGTTAAACCTAGCAAACAATGCAGCAATGCAGCAGTATTTAGCTTCCAATCCAGGGTATTGGCTTGATTCTTTTAGAAAGACACAAAACAGGTATGTGGAACCAGTGCGGAATTATATATTTGAACCCTGCACTTACCACATCCTGTGACAATTGTTTCACTGTGTATGAAGATGCT
ATTTCATGATACTGTGTTGATAATCTGTTGCAATTATCTATAATTGGAATGGTTCAACATGGAAACATTTGCACGCTGTGCTGGACAAATCTGCAGGAAAGTTGTTCCAGTAAACAGCAATATGTAAAGACATGTCCTTGGAGAAATGTTGTTGAAGGAAAATGTGCCCATAATTTGCTTGTGGGTCCTATTCTGATGGC
AATCCAAGTATGTCGACATCATTTGGACACTTCCTACCATTTTCCTCATGATGCGATGCTTTTACAAAATTATTTTTCTGGTCTGTTAGGTGATGAGTAAGATAACTGTATTATGCTGCTCATTTATTAAAGAGTTTAATTTCATTCCTGATGGGTGCTAATAAATCAGACCGAACAAAATTTGCTAGATATGTTAATAA
ATCAAAGTGCACAAAAATATGCTAGATATGTCATTTGGACGCACAATGTAGATTTCACATGCATTTTTCCAATATTAGTATCAGGAACAAAAGCTCTTGTTGGTGGGCTACCCATGATTTTTTGTTTATAATGACATCCGGATCATGTTGCTCATTGTTGACTTATGCTTAAACCAATCCTATCATAGTATTGTATCCCG
TGTGCACAGATTTGCCTCAGCATATCTTTAAAGAGTAAGGACTCAACCATTCATCCTGCTCCTAAGCC
>TRINITY_DN118591_c0_g1_i1 from sample A3 / Example unspliced isoform:ACTATCGGATGGAGACTATGTCACTTTGGGGTGGAGGGAGAAGGATGATTTAAAGGCAGTCGTCAATTTTTTGCGAACAGATGAACAAGTTTCATTGATTGGTTTGTGGGGTCGATCAATGGGGGCTGTAACAAGCTTGATGTATGGTGCTGAAGATCCGTCAATTGCAGGGATGGTTCTTGATAGTCCTTTTGCAAATT
TGGTTGATCTGATGATGGAGCTGGTTGATGTGTACAAGATCCGCCTTCCAAAATTTACTTGGATGCAGAGCAGATGCCAGTGAAGCCGTCATGATTTTGCTTCCTGCGTATATTACAGTGTTCACCCTTGATTTTTCTGGCTCTGGACTATCAGATGGAGAATATGTCACTTTGGGGTGGAGGGAGAAGGATGATTTAAA
GGCAGTCGTCAATTTTTTGCGAACAGATGAACAAGTTTCATTGATTGGTTTGTGGGGTCGATCAATGGGGGCTGTAACAAGCTTGATGTATGGTGCTGAAGATCCGTCAATTGCAGGGATGGTTCTTGATAGTCCTTTTGCAAATTTGGTTGATCTGATGATGGAGCTGGTTGATGTGTACAAGATCCGCCTTCCAAAAT
TTACTGTTAAAGTTGCTGTTCAATATATGCGAAAGGTGATTCAGAAGAAGGCTCACTTTGATATCATGGATCTTGATGTTGTTAAGATGGCAACAAAGTCTTTTATTCCTGCATTATTTGGACATGGCACGGAGGACCTTTTTATCCAACCTCATCATTCAGATCTCATATACAACTCGTATGCTGGTGACAAAAACATC
ATCAAGTTTGAGGGTGACCACAACTCTCCACGACCTCCATTCTATTATGATTCAATAAGCATTTTCTTCCATAATGTTTTGCATCCTCCAGATGATTTGATTGAGCAGCATGCTTCTGAAAGTTTGTATGAATACTTCGATGGATTAGAAAATCTGGATGAGAATGTGTTGCATGAAATTATTGGAGGTCCAAGATCTAG
ACAAAATGATACCACTGAAGATGCCATTGATCCTTTTCTCTCTAGGTGGCAAATGAGCAGAACTGAGGTGCCTTTTGAATTTGCAGACAATTCTGAAAAAACTCTAGGTGTCATCGATGCAGGGGAGCTAAGTGGATGGGAGAGAAAAGAAGAGAAAAACAATGATGAGGGTTCATCCAATAAATGCGATAATACGAGTG
AGAGCATCTTTGACAGAAATTGCCTTGATACTGTAGCAGCACTTCCCACAAGCAACCAAGTTACAGATTCTTCTTTGAATAGATTTGCTCAATTTCCACTTTCAGTAGATGATGAAGAAAGGATGGTCATGGAAGCAATCACTGCCTCCCTTCGGGATCTGGAAACTGAAAAAGTTTCTCAAAATCAAATCTGCCAAAGT
TCAGATACTACATCCAGTCATAAAGATTCAGAAACAACTTTTCGAGACATTTCTAGTGGCCCTGAAAAAACATTTTCACAGGCCACAACTTCTGAAATAATGATATCACCATTTATGGATAGTTCTCAAAAACAATATGCTTCACCTGAAAGGGTCAAAGCACAAACAGAGACTTTCTCTCACTCATCTTCCGCAAAGAA
CAAATCAACTAGCATATCAGAGGCAAGCCACCAACAGGGTAGTTTTTTCCATAATGGCCAATAACAACAGCTGCAACTAATCAGTTTGTCTATGATTGCAATATACTTGTAATGGTGAACCGTTAAACCTAGCAAACAATGCAGCAATGCAGCAGTATTTgtatgtacattatcaatttgttcagtgtattttgtattta
ctatctatgatcaattgtaaattatggcctattggggtctagcaatttcatgttgctcattgttgacattattttaatttcagAGCTTCCAATCCAGGGTATTGGCTTGATTCTTTTAGAAAGACACAAAACAGGTATGTGGAACCAGTGCGGAATTATATATTTGAACCCTGCACTTACCACATCCTGTGACAATTGTT
TCACTGTGTATGAAGATGCTATTTCATGATACTGTGTTGATAATCTGTTGCAATTATCTATAATTGGAATGGTTCAACATGGAAACATTTGCACGCTGTGCTGGACAAATCTGCAGGAAAGTTGTTCCAGTAAACAGCAATATGTAAAGACATGTCCTTGGAGAAATGTTGTTGAAGGAAAATGTGCCCATAATTTGCTT
GTGGGTCCTATTCTGATGGCAATCCAAGTATGTCGACATCATTTGGACACTTCCTACCATTTTCCTCATGATGCGATGCTTTTACAAAATTATTTTTCTGGTCTGTTAGGTGATGAGTAAGATAACTGTATTATGCTGCTCATTTATTAAAGAGTTTAATTTCATTCCTGATGGGTGCTAATAAATCAGACCGAACAAAA
TTTGCTAGATATGTTAATAAATCAAAGTGCACAAAAATATGCTAGATATGTCATTTGGACGCACAATGTAGATTTCACATGCATTTTTCCAATATTAGTATCAGGAACAAAAGCTCTTGTTGGTGGGCTACCCATGATTTTTTGTTTATAATGACATCCGGATCATGTTGCTCATTGTTGACTTATGCTTAAACCAATCC
TATCATAGTATTGTATCCCGTGTGCACAGATTTGCCTCAGCATATCTTTAAAGAGTAAGGACTCAACCATTCATCCTGCTCCTAAGCC