NA ----> NA
Intron 1 GTAAATAATT ... GCTTGGACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 18.44 | 115 | 4.7 | 26 |
| A2 | 14.84 | 109 | 6.7 | 19 |
| A3 | 14.2 | 139 | 6.3 | 23 |
| A4 | 23.4 | 60 | 6.7 | 18.3 |
| A5 | 23.26 | 33 | 2 | 10 |
| A6 | 22.93 | 121 | 8.7 | 36 |
| A7 | 13.51 | 288 | 18.7 | 45 |
| A8 | 14.29 | 204 | 15 | 34 |
| A9 | 14.53 | 253 | 10 | 43 |
| A10 | 15.43 | 274 | 15 | 50 |
>TRINITY_DN37587_c0_g1_i1 from sample A7 / Example spliced isoformGCCGGAACGGAAGATGCCCCACAACCGGCACCTCACAGTATATATTCGTGAAACCCCACAACGTGTGCCGGCAAAGTGTTCCCAATGTTATCTCTGCATACAGATTTTAACTTACCCGGAGATTTACCAGAAGCCGGGCTTTTTACCACGAGAAACGCGTTATTGATTACGCGAATATGGCGTTTGTTTTAAAGGCTAGC
ATCGTTCAAAGCTCGTCTGCGGCGGGCTAAGTCAAACACAAGTGACCCGTGAAGTATCTACTGTTAACCGCAGCAGTCGATGGAACCCTAACCTGAAACTATCACCGCCTCCATTGCTCCTGGAACCCTAACCCGCAGCAGCATCACCATCTTCTCCCAGACTTCACCGCACCCAAATTGTTATCGCGGTTTTTTCATTA
TCTCCACACTTCTAATATAAAATCCATTGCGCTCTTCATTCCACGGATTTGCAGAAGCATTCACCGCATTTAAGCATGGAGTCTCCTGGTCAGAGCAGCAAGAAGAGAAAGAGGAAGAGAACCTTAGTCCAGACAGAATACGTTCAACCGCAAAGCGGCTTTGGATGCCCCTTCGTAGGCTACTTTCCATCAGGCTACGA
TCCCCTCAAAAATGACGACGCCTCCTCCAGTTTAGAGGTAGGAGTCTACCAAAACACCAGGAAATTTAAGACCAAGCAACTACAACTAGTCGCAACGCCGAAGGAGGCAAGCGTAGACTTCGTTGGAACTAATTATTTGGGAGAAAATTCACAGTGGCAGCCCTGCAACTATCTCATGGGCGTCTTTGACAAGGAAACCA
GCACTCTGAAGTTCGTCCCCATTTCTGGCGCAAAGATTTTCAGAATGGAAGCAAGAGTGCGAGGAATGGAGTACGGCGCTACAAATGCCGAGGAAGAAATAGCCGAAGAACTTACTGCCGAGGATAGACAGAAGAAACACCAACTCCTTACAGCTACTTTTGGGACGCACAAGAGCCGTTTAGAGGCAAAACGTCGCGAC
AAGTCAAGATTAAAGGAAGAAGCCCTAGGAGATCAAAGCGGGATTGGAAAACTGTTCGAAGAAGCAGCAAAGAATACAACAGTATTGACAAATGCAGAGGCACTTGCTCGAGCTAATGCTAATATAGTCAGAAATATTCCGCCCTACGATGCATCAGCTACAAAACCAGAAAAGGTTTATCTGCTAGAGAATATTATACT
AAAAGAGGAATGGGATCAACAGCCTAATGTTAGTGAACTGATTGCAGCAGGAACAAACTCCCGAACAGCTGCAGAATTTCAGCGAAGTGATTATCCTCTTTTTGTTCGCAAGCGTATATATAAAGTGGGATCTGAGAGTGGTAAAGCACGGGATAGGCTTGCTCATATATTGTCATATATAACCCATCTTTTGAACTTTA
AGGCTATGCCACTGCATGCCATTAAAAGGTTATTGAAGGCAAGGACTACACTAGAGCATGATACAGATGACAAAGAAACAGCACGTCTAATGGAGTCATCAAAAATTCCTGGTGTTACTCTTGCTAAATTTTTGAAGCTATTTACAGATTCAAAAGAGAGCACGCGATCGAGGGAAAAAACAGACCTACTTATCAGTTAT
ATCCTTGTACTAACTCTTATGGCAGATGGTTTTGAAACTCACCCATCAGATATTGCAGCGGATTTGAAAATGATTGTTCCTGATGTAAAATCTCATTACCAAGAATTGGGCTGTAAAGCTCAGGGTTCACAAAATAATTTGAAAATTTCACTCCCTGTCCCACTCAAATTTCCAACCATGAAACAAACAATACAGAGGAG
AAGGTAGAAGTCATTTTGTGATCTTTTTCTAGGACATTATTCTATGGAGTTATTGTTCAGAATATATACCTTTGCTTCCACTATAATTGAAATTTTGTCTATATAGTTAAACATCAAATACTATGGTTGACTACTAAAAGAGTCGTAGTTTTAATATTTATTGAAGTCAAAATAATGTTTTTGGATGAAGTGACGCAAGT
AAATTTGGGGGATGTAGTGCATTGGTTTTGAGAGGTCTTTTCTTATCTTTATGTCTTATGCATGTCTTTTCCACGGATTGCCTCTAGTACTTTATTGGATTTCTCAATGTTTA
>TRINITY_DN37587_c0_g1_i2 from sample A7 / Example unspliced isoform:GCCGGAACGGAAGATGCCCCACAACCGGCACCTCACAGTATATATTCGTGAAACCCCACAACGTGTGCCGGCAAAGTGTTCCCAATGTTATCTCTGCATACAGATTTTAACTTACCCGGAGATTTACCAGAAGCCGGGCTTTTTACCACGAGAAACGCGTTATTGATTACGCGAATATGGCGTTTGTTTTAAAGGCTAGC
ATCGTTCAAAGCTCGTCTGCGGCGGGCTAAGTCAAACACAAGTGACCCGTGAAGTATCTACTGTTAACCGCAGCAGTCGATGGAACCCTAACCTGAAACTATCACCGCCTCCATTGCTCCTGGAACCCTAACCCGCAGCAGCATCACCATCTTCTCCCAGACTTCACCGCACCCAAATTGTTATCGCGGTTTTTTCATTA
TCTCCACACTTCTAATATAAAATCCATTGCGCTCTTCATTCCACGGATTTGCAGAAGCATTCACCGCATTTAAGCATGGAGTCTCCTGGTCAGAGCAGCAAGAAGAGAAAGAGGAAGAGAACCTTAGTCCAGACAGAATACGTTCAACCGCAAAGCGGCTTTGGATGCCCCTTCGTAGGCTACTTTCCATCAGGCTACGA
TCCCCTCAAAAATGACGACGCCTCCTCCAGTTTAGAGGTAGGAGTCTACCAAAACACCAGGAAATTTAAGACCAAGCAACTACAACTAGTCGCAACGCCGAAGGAGGCAAGCGTAGACTTCGTTGGAACTAATTATTTGGGAGAAAATTCACAGTGGCAGCCCTGCAACTATCTCATGGGCGTCTTTGACAAGGAAACCA
GCACTCTGAAGTTCGTCCCCATTTCTGGCGCAAAGgtaaataattacggataaaaaagaagaagaattcaaacaccctttcattccagagttagaatgctgggaatgattgtgttctgaaaagttttcgatctgcttggacagATTTTCAGAATGGAAGCAAGAGTGCGAGGAATGGAGTACGGCGCTACAAATGCCGAG
GAAGAAATAGCCGAAGAACTTACTGCCGAGGATAGACAGAAGAAACACCAACTCCTTACAGCTACTTTTGGGACGCACAAGAGCCGTTTAGAGGCAAAACGTCGCGACAAGTCAAGATTAAAGGAAGAAGCCCTAGGAGATCAAAGCGGGATTGGAAAACTGTTCGAAGAAGCAGCAAAGAATACAACAGTATTGACAAA
TGCAGAGGCACTTGCTCGAGCTAATGCTAATATAGTCAGAAATATTCCGCCCTACGATGCATCAGCTACAAAACCAGAAAAGGTTTATCTGCTAGAGAATATTATACTAAAAGAGGAATGGGATCAACAGCCTAATGTTAGTGAACTGATTGCAGCAGGAACAAACTCCCGAACAGCTGCAGAATTTCAGCGAAGTGATT
ATCCTCTTTTTGTTCGCAAGCGTATATATAAAGTGGGATCTGAGAGTGGTAAAGCACGGGATAGGCTTGCTCATATATTGTCATATATAACCCATCTTTTGAACTTTAAGGCTATGCCACTGCATGCCATTAAAAGGTTATTGAAGGCAAGGACTACACTAGAGCATGATACAGATGACAAAGAAACAGCACGTCTAATG
GAGTCATCAAAAATTCCTGGTGTTACTCTTGCTAAATTTTTGAAGCTATTTACAGATTCAAAAGAGAGCACGCGATCGAGGGAAAAAACAGACCTACTTATCAGTTATATCCTTGTACTAACTCTTATGGCAGATGGTTTTGAAACTCACCCATCAGATATTGCAGCGGATTTGAAAATGATTGTTCCTGATGTAAAATC
TCATTACCAAGAATTGGGCTGTAAAGCTCAGGGTTCACAAAATAATTTGAAAATTTCACTCCCTGTCCCACTCAAATTTCCAACCATGAAACAAACAATACAGAGGAGAAGGTAGAAGTCATTTTGTGATCTTTTTCTAGGACATTATTCTATGGAGTTATTGTTCAGAATATATACCTTTGCTTCCACTATAATTGAAA
TTTTGTCTATATAGTTAAACATCAAATACTATGGTTGACTACTAAAAGAGTCGTAGTTTTAATATTTATTGAAGTCAAAATAATGTTTTTGGATGAAGTGACGCAAGTAAATTTGGGGGATGTAGTGCATTGGTTTTGAGAGGTCTTTTCTTATCTTTATGTCTTATGCATGTCTTTTCCACGGATTGCCTCTAGTACTT
TATTGGATTTCTCAATGTTTA