sp|F4IS91|RSA1_ARATH ----> Protein SHORT ROOT IN SALT MEDIUM 1
Intron 1 GTATTTTGTT ... GATGCAACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 32.76 | 78 | 19 | 57 |
| A2 | 22.64 | 41 | 12 | 12 |
| A3 | 36.63 | 32 | 21 | 16 |
| A4 | 27.52 | 54 | 15 | 26 |
| A5 | 25.27 | 34 | 11 | 12 |
| A6 | 30.43 | 8 | 3 | 4 |
| A7 | 21.31 | 24 | 6 | 7 |
| A8 | 23.64 | 21 | 5 | 8 |
| A9 | 20.99 | 32 | 3 | 14 |
| A10 | 9.68 | 28 | 2 | 4 |
>TRINITY_DN104325_c0_g1_i1 from sample A5 / Example spliced isoformGGGGGGAGAGGGCTTGAAGATCTAGTGTATGGGCAGGGGGAGCATCATGCAGTCTATGGTGTCAGCTTGCCACCTGGCCGAGATTATAGCTCCGGTAAAGGCCCTGTTCCTGTTGGTGGCGCTTCTTGGGATGCAGGCTATGGTGGCAGTGTTGGAAGTCGGATAGATCGTTTTGAGGATCAGCGAGATACTTTGCTTCG
GCATGAGTATGATAGGAGAGAGGAGGATTTGCGAAAAGAGCGCGAAAGGGAGAGGGAGCGAGAGCGTGAATTGGAGAGACGAGAGCGTGAATTGGAGCGACGAGAGCGTGAGCGGGAACGTGATCGTCAACGGGAACGTGAACTTCGGAGACGAGATCGTACTCCTGTTAGACCTCTTCCTAGGGTTCGTAGAGAACCTT
CATTTTCCAGGAAAATTGAGAGGGTTCCTAGGAGAGTTTCTCCTCGCCGTGAGCCCATTCGCAGGCGCGTATCCCCGGTTAGAGAGTACGTCTGCAAGATTGAGCCTCACACTCTTGTTGAAGTTGAAAGGGATTTCCCATCTGTTAGCAAACGCTACTCAAGGCTCTATGTAGCTCCAGAGTTTTCTAAGCTTGTTGTG
AACTGGTTAAAGGAAGACCTTGATATTACACTAACAACCCCTGTCAGCTTTGTGCATGATGCTGTAGTAGAGGATGAGAGCGTTCCGAAGGAGTCTTCATCAAAGTTGTCTGACAAAGTAGCAGGAGGCATGATACTGGAGGAGGAAGGCACGATTTGGAATTCGAAGGTCATTCTAATGAGTGGAATGAGTGAAAATGT
TATAGCAGAGTTGGTTTCTGATAAAGGTTCAGCGGATAGAGGCCTACACATGCATAATGCTCTTAGGTTTTCTGTTCTTCGTAAAGAGCACACATTTTTATTAGCTGGAGGGGCATGGGACAGGGTTTTAGATGGTGGTGACCCAGCTACAGATCAATCTGCTCTAATCCGTACAGCTATAAGATGCTTCAAGGAAGTCA
CACAACTTGATCTATCAAGCTGCAAGCGCTGGAGTCGTTTTGTTGAGGTGCACTATGACAGAATAGGTAAAGGCAGTCCAAGCCACAGAGAAATCACTGTTATTTTTATTCCGGACTTATCTACATGCCTGCCTTCTTTGGAGAGCTGGAAGGTCCAGTATTTAGAGCATAAAAAAGCTGAGAGAGAGCGTGAAGCTGCT
ATGAAGGAGAAGAAAGGAAAGGCCAGCGATAAGAAGGATGTTATTAAAGGGAACTCGGGCTCCAAAGAAGAAAAGGAGATCAACCCGGCAGATAAAGCTAAGAAAGAAAAGGAAGACAAGAAAGATAAAGATAAAAACTTGAAGGATGAGAAAAAGGAGAATACTGATAACAAGGAAATAGAAAAGAAAGATGAAAACAA
AGAGAAGGAAGGAAAAAAAGCAGAGAAAAAGAAGGATGAAAAGAAGGTGACCGAGGAAAAGAAAGCAGAAAAAAAGAAAGATGAGAAGAAGGTGACCGAGGAAAAAAAACCAGAGAAGAAGAAAGATGAGAAGGACATTGAGGAAAAGAAATCAGTGAAGAAGAAGGATCAGAAGGACGTGGAGGAAAAGAAGGTAGAGA
AGAAGAAAGATGAGAAGATCACTGAAGACAAGAAAGCAGAGAAGAAGAAAGATGAGAAGATCACTGAAGACAATAAAGCAGAGAAGAAGAAAGATGAGAAGATCACTGAAGACAATAAAGCAGAGAAGAAGAAAGATGA
>TRINITY_DN104325_c0_g1_i7 from sample A5 / Example unspliced isoform:GGGGGGAGAGGGCTTGAAGATCTAGTGTATGGGCAGGGGGAGCATCATGCAGTCTATGGTGTCAGCTTGCCACCTGGCCGAGATTATAGCTCCGGTAAAGGCCCTGTTCCTGTTGGTGGCGCTTCTTGGGATGCAGGCTATGGTGGCAGTGTTGGAAGTCGGATAGATCGTTTTGAGGATCAGCGAGATACTTTGCTTCG
GCATGAGTATGATAGGAGAGAGGAGGATTTGCGAAAAGAGCGCGAAAGGGAGAGGGAGCGAGAGCGTGAATTGGAGAGACGAGAGCGTGAATTGGAGCGACGAGAGCGTGAGCGGGAACGTGATCGTCAACGGGAACGTGAACTTCGGAGACGAGATCGTACTCCTGTTAGACCTCTTCCTAGGGTTCGTAGAGAACCTT
CATTTTCCAGGAAAATTGAGAGGGTTCCTAGGAGAGTTTCTCCTCGCCGTGAGCCCATTCGCAGGCGCGTATCCCCGGTTAGAGAGTACGTCTGCAAGATTGAGCCTCACACTCTTGTTGAAGTTGAAAGGGATTTCCCATCTGTTAGCAAACGCTACTCAAGGCTCTATGTAGCTCCAGAGTTTTCTAAGCTTGTTGTG
AACTGGTTAAAGGAAGACCTTGATATTACACTAACAACCCCTGTCAGgtattttgtttttacccttttgtattttaagatgctagaattttgtagtaaattttgttattagttgcaataatttagatatattaatgtatctgggatatgctgctgccatgttggtttaatgttgataggatatcggccaaaattctcatg
gagctgtgagaaccctagtggcctatagagttgtgttttgtttttatatgctttactttgtctgagttaatattgaaactgttaggtcttttaaagcctcactaaatggtttttaaaacttgcacatcgtaaaattgtgaaaactgattgaatgactgttataaactcttgatctgaaatgggatgcaacagCTTTGTGC
ATGATGCTGTAGTAGAGGATGAGAGCGTTCCGAAGGAGTCTTCATCAAAGTTGTCTGACAAAGTAGCAGGAGGCATGATACTGGAGGAGGAAGGCACGATTTGGAATTCGAAGGTAATCTGTCGAGATGAGGCGACTTTTCGGTGTTGCATCAACAAACGTCTTCGGAGCTTCTATGATCATTTTGGACCATAGAAAGTA
TATTTTTAGAATTTTAGGTGGAGTTTATTGCGTGATCCTCCTTCAGAGGTTTGAGGGCCCCCCTTCAGTTTATCATTATCGAATTACTGTTCGTGATGACAGCGGCTGCGCCATTTACTCTTTTAGAAGCACCACATAGTATTCATATACACCATGTTTATATAATGATAAAAATGCACCGATACCTTGCTGTTTTGCTG
TTGGTGGTGGGCGCGGTTGTTGGCGAAAGCGTGCGAAGAAGAACGTTCCAAAGTTTATTCTGCTCTTTAAGTTTCGTTAGAAGGAGACACGCTTGTGTGATAAAAGTGTTATATAGGATTATCATCTTCCGAGTGATTTGATCTAATTGATTAGTCTTTTTTCTAATGAGTGTAAAGTACAAGCAAATCTAACCTTGCCG
TAAATAAATTTATGGTGTCATTTGTACTGGTTGATTTATTTTGTACTCTCTTACATGTAATGTTTTGCAGGTCT