NA ----> NA
Intron 1 GTACTGAGCT ... AAATGCACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 63.89 | 13 | 22 | 24 |
| A2 | 92.59 | 1 | 13 | 12 |
| A3 | 66.67 | 6 | 14 | 10 |
| A4 | 78.95 | 2 | 8 | 7 |
| A5 | 66.67 | 2 | 4 | 4 |
| A6 | 74.47 | 6 | 13 | 22 |
| A7 | 66.07 | 19 | 40 | 34 |
| A8 | 68.63 | 16 | 34 | 36 |
| A9 | 78.31 | 9 | 32 | 33 |
| A10 | 68 | 12 | 19 | 32 |
>TRINITY_DN114697_c0_g1_i6 from sample A1 / Example spliced isoformTTCGGTTTTCGTTGTGGTTGTCAGTGTCCGCGTGGTCTGATGAAGGAGAAGGAATGGGCCGAGGTTTGGGTTTGAGTTTTAGTGTGAGAGCGTGGTCGTCGTCGTTGTGTGCGTCCCTTCCGACTCATACATATATTCTTCCTTCCTTCCACTTTCTCAAAAACACATTTGCATCCAAATCCTATTCTTCTTCTTCTTTG
TCAAATCTCAAATACAGAAGAAGAACCAAAGGCCTAACTCGTGACAGAGAGGGTAGCAGGAGGGGAATGAACAGAATGGTGGGCGCAAGCAGTGTGAAGGAAAGCATCGAGCTAACAGAGTTGGAGAAGAAAATATTCGATAGACTAAGGGAGGTGCTGCGCGAGTTCAATCTTCAAACACAACTACGCGTTGCAGGAGG
TTGGGTTCGTGACAAGCTTTTGGGAAAGGACTGTTATGATATCGATATTGCTTTGGACAACATGTTAGGTCGAGAATTTTGTGAGAAGGTCAATGGATATTTGTCAAAAGCTGGAGAGAAAACTCAGGGAGTTGGTGTCATTCAATGCAACCCAGATCAATCAAAACACCTGGAGACTGCAAGAATGCGTATTTTTGATG
TCTGGATTGACTTTGTCAATCTTCGATCTGAAACATATGCAGAGCACAGTCGTATTCCTTCCATGGAATTTGGAACAGCTGAACAAGATGCATATAGAAGGGATTTGACAATCAACAGCTTGTTCTACAATATAAACACAGGTTCTGTGGAGGACTTGACTGGAAGAGGTATATCGGATTTAAAAGCTGGAGTTATAGCT
ACACCTTTACCACCCAAGGCCACATTTCTGGATGATCCCTTACGTGTTCTGCGAGCAGTTCGATTTGGGGCACGGTTTGATTTTAACCTGGATAATGAATTAAAGAAGGCAGCTACTGAGGAAGAGGTGAAAAATGCATTGGCTAGCAAAATCAGTCGTGAACGGATTGGTCATGAGATTGATCTGATGCTTTCTGGCAA
TCAACCCGTCAAGGCAATTAGCCAGCTTAAAGATTTGCAGTTATTCTGGACTGTATTCAGTCTTCCTCAAAGTGTGGGCAATGAGTTGCCTGAGGATTGTGAAAGTCTCTGTTGCAAATGCATGGATGCTATTTGGGAAGTTCTTGGTAAAGTTGGATCTTCAATATTCAATGAAGAACACAGAAGATTGTGTTCATATA
GTGCTTTATTCTTGCCCTTAAGGAAAGAAAATTATGCAGATCGCAAAGGAAAATTGATTCCTGTAGCAAATGCAATCATCAGAGATTCTCTAAAGCTGAAGGCTGATGATGCGGAAAAGATGAGATGGAAGATTGGGATGTCTCCTTAAAGTCAAAGCAACGGATCCAGGCAGGTTTGCTCCTGATCAAGATTAAGGCAT
TATGGCGGGTGGCTTTGTTACTTTCAACTGTGATAAGATACCCTATTTCTGAGTGCTCTGAAGTTCAGGAGTGCAAAGCATTAGTGGAGAAAAGGGCTTTGCTGTACACATCTGTTGAGAAGTCTGTTTTACAATTAG
>TRINITY_DN114697_c0_g1_i3 from sample A1 / Example unspliced isoform:TTCGGTTTTCGTTGTGGTTGTCAGTGTCCGCGTGGTCTGATGAAGGAGAAGGAATGGGCCGAGGTTTGGGTTTGAGTTTTAGTGTGAGAGCGTGGTCGTCGTCGTTGTGTGCGTCCCTTCCGACTCATACATATATTCTTCCTTCCTTCCACTTTCTCAAAAACACATTTGCATCCAAATCCTATTCTTCTTCTTCTTTG
TCAAATCTCAAATACAGAAGAAGAACCAAAGGCCTAACTCGTGACAGAGAGGGTAGCAGGAGGGGAATGAACAGAATGGTGGGCGCAAGCAGTGTGAAGGAAAGCATCGAGCTAACAGAGTTGGAGAAGAAAATATTCGATAGACTAAGGGAGGTGCTGCGCGAGTTCAATCTTCAAACACAACTACGCGTTGCAGGAGG
TTGGGTTCGTGACAAGCTTTTGGGAAAGGACTGTTATGATATCGATATTGCTTTGGACAACATGTTAGGTCGAGAATTTTGTGAGAAGGTCAATGGATATTTGTCAAAAGCTGGAGAGAAAACTCAGGGAGTTGGTGTCATTCAATGCAACCCAGATCAATCAAAACACCTGGAGACTGCAAGAATGCGTATTTTTGATG
TCTGGATTGACTTTGTCAATCTTCGATCTGAAACATATGCAGAGCACAGTCGTATTCCTTCCATGGAATTTGGAACAGCTGAACAAGATGCATATAGAAGGGATTTGACAATCAACAGCTTGTTCTACAATATAAACACAGGTTCTGTGGAGGACTTGACTGGAAGAGGTATATCGGATTTAAAAGCTGGAGTTATAGCT
ACACCTTTACCACCCAAGGCCACATTTCTGGATGATCCCTTACGTGTTCTGCGAGCAGTTCGATTTGGGGCACGGTTTGATTTTAACCTGGATAATGAATTAAAGAAGGCAGCTACTGAGGAAGAGGTGAAAAATGCATTGGCTAGCAAAATCAGTCGTGAACGGATTGGTCATGAGATTGATCTGATGCTTTCTGGCAA
TCAACCCGTCAAGGCAATTAGCCAGCTTAAAGATTTGCAGTTATTCTGGACTGTATTCAGTCTTCCTCAAAGTGTGGGCAATGAGTTGCCTGAGGATTGTGAAAGTCTCTGTTGCAAATGCATGGATGCTATTTGGGAAGTTCTTGGTAAAGTTGGATCTTCAATATTCAATGAAGAACACAGAAGATTGTGTTCATATA
GTGCTTTATTCTTGCCCTTAAGGAAAGAAAATTATGCAGATCGCAAAGGAAAATTGATTCCTGTAGCAAATGCAATCATCAGAGATTCTCTAAAGCTGAAGGCTGATGATGCGGAAAAGgtactgagcttacataatgctgctgaggaattctttctcctgattgatttactaatctcaggcgaaggtacgattgcccac
aaaaaatgcacagATGAGATGGAAGATTGGGATGTCTCCTTAAAGTCAAAGCAACGGATCCAGGCAGGTTTGCTCCTGATCAAGATTAAGGCATTATGGCGGGTGGCTTTGTTACTTTCAACTGTGATAAGATACCCTATTTCTGAGTGCTCTGAAGTTCAGGAGTGCAAAGCATTAGTGGAGAAAAGGGCTTTGCTGTA
CACATCTGTTGAGAAGTCTGTTTTACAATTAGGTCTGTCTAATCTCTTATTCCATTTTAATGTTTTTGTTGGCTTTGTTCTCTGCTTCATATGAAGATTTTCCTATTTTATCACTATGAATAGAAGAGATCTCTGCTTTCCATCATGTGTGATAACAGTTTATTACTACATTGCTGTATCAATATGTTTTGAGGTCCCAC
AGTCTTCTATATGGGCATTTGAGGATGTTAGATTTCTGATCAATCCAATCTGTTCCACTCCATGAGAACTTGAAACCTCAACGCTTCATTTTAAGCATATAGTGGATATTTAACTGACACGAGCAGCTCTAAGAACAAGGAAGATTAAAATGATCCTACAAC
Intron 2 GTTTGCTCCT ... TTACAATTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 70.21 | 7 | 17 | 16 |
| A2 | 75 | 5 | 9 | 21 |
| A3 | 60 | 4 | 4 | 8 |
| A4 | 80 | 2 | 6 | 10 |
| A5 | 53.85 | 3 | 2 | 5 |
| A6 | 74.65 | 9 | 21 | 32 |
| A7 | 74.31 | 14 | 35 | 46 |
| A8 | 72.92 | 13 | 24 | 46 |
| A9 | 79.05 | 11 | 31 | 52 |
| A10 | 69.11 | 19 | 30 | 55 |
>TRINITY_DN116983_c2_g3_i8 from sample A3 / Example spliced isoformGTGGTTGTCAGTGTCCGCGTGGTGTGATTGAAGCTTGCTATGGATTCGGTTTTCGTTGTGGTTGTCAGTGTCCGCGTGGTCTGATGAAGGAGAAGGAATGGGCCGAGGTTTGGGTTTGAGTTTTAGTGTGAGAGCGTGGTCGTCGTCGTTGTGTGCGTCCCTTCCGACTCATACATATATTCTTCCTTCCTTCCACTTTC
TCAAAAACACATTTGCATCCAAATCCTATTCTTCTTCTTCTTTGTCAAATCTCAAATACAGAAGAAGAACCAAAGGCCTAACTCGTGACAGAGAGGGTAGCAGGAGGGGAATGAACAGAATGGTGGGCGCAAGCAGTGTGAAGGAAAGCATCGAGCTAACAGAGTTGGAGAAGAAAATATTCGATAGACTAAGGGAGGTG
CTGCGCGAGTTCAATCTTCAAACACAACTACGCGTTGCAGGAGGTTGGGTTCGTGACAAGCTTTTGGGAAAGGACTGTTATGATATCGATATTGCTTTGGACAACATGTTAGGTCGAGAATTTTGTGAGAAGGTCAATGGATATTTGTCAAAAGCTGGAGAGAAAACTCAGGGAGTTGGTGTCATTCAATGCAACCCAGA
TCAATCAAAACACCTGGAGACTGCAAGAATGCGTATTTTTGATGTCTGGATTGACTTTGTCAATCTTCGATCTGAAACATATGCAGAGCACAGTCGTATTCCTTCCATGGAATTTGGAACAGCTGAACAAGATGCATATAGAAGGGATTTGACAATCAACAGCTTGTTCTACAATATAAACACAGGTTCTGTGGAGGACT
TGACTGGAAGAGGTATATCGGATTTAAAAGCTGGAGTTATAGCTACACCTTTACCACCCAAGGCCACATTTCTGGATGATCCCTTACGTGTTCTGCGAGCAGTTCGATTTGGGGCACGGTTTGATTTTAACCTGGATAATGAATTAAAGAAGGCAGCTACTGAGGAAGAGGTGAAAAATGCATTGGCTAGCAAAATCAGT
CGTGAACGGATTGGTCATGAGATTGATCTGATGCTTTCTGGCAATCAACCCGTCAAGGCAATTAGCCAGCTTAAAGATTTGCAGTTATTCTGGACTGTATTCAGTCTTCCTCAAAGTGTGGGCAATGAGTTGCCTGAGGATTGTGAAAGTCTCTGTTGCAAATGCATGGATGCTATTTGGGAAGTTCTTGGTAAAGTTGG
ATCTTCAATATTCAATGAAGAACACAGAAGATTGTGTTCATATAGTGCTTTATTCTTGCCCTTAAGGAAAGAAAATTATGCAGATCGCAAAGGAAAATTGATTCCTGTAGCAAATGCAATCATCAGAGATTCTCTAAAGCTGAAGGCTGATGATGCGGAAAAGGTACTGAGCTTACATAATGCTGCTGAGGAATTCTTTC
TCCTGATTGATTTACTAATCTCAGGCGAAGGTACGATTGCCCACAAAAAATGCACAGATGAGATGGAAGATTGGGATGTCTCCTTACAGTCAAAGCAACGGATCCAGGCAGAGCTAGAAAATGTGTGGGAAATGAAGCGTTTACTGGATGGGAAAGTCATTATGAGTGTTTTAGGACTTAAAATTGGAGGGCCGCTGGTG
AAGCAATGGCAAGAAGAAATACTTAAATGGCAACTGGCTAATCCATCCGGTACAGCAGAAGAATGCCTTGATTGGCTTCAACAGGCTAATGCAAAGCGAATGAAAACTCATTGAAGTCATGCCTAGATTGAGGGTAGGCGATAATGAAAATAGTGAGAATTAAAGGGAGATTTTGAAACTTATCCCAAGTAAGAGTCAAG
AAAGGAGGAAATCGTTTAAAGGGTAATTTACTAATTTGGGACCAAGCAACCAACTAAGCACTGAGAATTTTATGCATCAAAGCTCAGGTTTCTTG
>TRINITY_DN116983_c2_g3_i6 from sample A3 / Example unspliced isoform:GTGGTTGTCAGTGTCCGCGTGGTGTGATTGAAGCTTGCTATGGATTCGGTTTTCGTTGTGGTTGTCAGTGTCCGCGTGGTCTGATGAAGGAGAAGGAATGGGCCGAGGTTTGGGTTTGAGTTTTAGTGTGAGAGCGTGGTCGTCGTCGTTGTGTGCGTCCCTTCCGACTCATACATATATTCTTCCTTCCTTCCACTTTC
TCAAAAACACATTTGCATCCAAATCCTATTCTTCTTCTTCTTTGTCAAATCTCAAATACAGAAGAAGAACCAAAGGCCTAACTCGTGACAGAGAGGGTAGCAGGAGGGGAATGAACAGAATGGTGGGCGCAAGCAGTGTGAAGGAAAGCATCGAGCTAACAGAGTTGGAGAAGAAAATATTCGATAGACTAAGGGAGGTG
CTGCGCGAGTTCAATCTTCAAACACAACTACGCGTTGCAGGAGGTTGGGTTCGTGACAAGCTTTTGGGAAAGGACTGTTATGATATCGATATTGCTTTGGACAACATGTTAGGTCGAGAATTTTGTGAGAAGGTCAATGGATATTTGTCAAAAGCTGGAGAGAAAACTCAGGGAGTTGGTGTCATTCAATGCAACCCAGA
TCAATCAAAACACCTGGAGACTGCAAGAATGCGTATTTTTGATGTCTGGATTGACTTTGTCAATCTTCGATCTGAAACATATGCAGAGCACAGTCGTATTCCTTCCATGGAATTTGGAACAGCTGAACAAGATGCATATAGAAGGGATTTGACAATCAACAGCTTGTTCTACAATATAAACACAGGTTCTGTGGAGGACT
TGACTGGAAGAGGTATATCGGATTTAAAAGCTGGAGTTATAGCTACACCTTTACCACCCAAGGCCACATTTCTGGATGATCCCTTACGTGTTCTGCGAGCAGTTCGATTTGGGGCACGGTTTGATTTTAACCTGGATAATGAATTAAAGAAGGCAGCTACTGAGGAAGAGGTGAAAAATGCATTGGCTAGCAAAATCAGT
CGTGAACGGATTGGTCATGAGATTGATCTGATGCTTTCTGGCAATCAACCCGTCAAGGCAATTAGCCAGCTTAAAGATTTGCAGTTATTCTGGACTGTATTCAGTCTTCCTCAAAGTGTGGGCAATGAGTTGCCTGAGGATTGTGAAAGTCTCTGTTGCAAATGCATGGATGCTATTTGGGAAGTTCTTGGTAAAGTTGG
ATCTTCAATATTCAATGAAGAACACAGAAGATTGTGTTCATATAGTGCTTTATTCTTGCCCTTAAGGAAAGAAAATTATGCAGATCGCAAAGGAAAATTGATTCCTGTAGCAAATGCAATCATCAGAGATTCTCTAAAGCTGAAGGCTGATGATGCGGAAAAGGTACTGAGCTTACATAATGCTGCTGAGGAATTCTTTC
TCCTGATTGATTTACTAATCTCAGGCGAAGGTACGATTGCCCACAAAAAATGCACAGATGAGATGGAAGATTGGGATGTCTCCTTAAAGTCAAAGCAACGGATCCAGGCAGgtttgctcctgatcaagattaaggcattatggcgggtggctttgttactttcaactgtgataagataccctatttctgagtgctctgaa
gttcaggagtgcaaagcattagtggagaaaagggctttgctgtacacatctgttgagaagtctgttttacaattagAGCTAGAAAATGTGTGGGAAATGAAGCGTTTACTGGATGGGAAAGTCATTATGAGTGTTTTAGGACTTAAAATTGGAGGGCCGCTGGTGAAGCAATGGCAAGAAGAAATACTTAAATGGCAACT
GGCTAATCCATCCGGTACAGCAGAAGAATGCCTTGATTGGCTTCAACAGGCTAATGCAAAGCGAATGAAAACTCATTGAAGTCATGCCTAGATTGAGGGTAGGCGATAATGAAAATAGTGAGAATTAAAGGGAGATTTTGAAACTTATCCCAAGTAAGAGTCAAGAAAGGAGGAAATCGTTTAAAGGAACGACATACAAG
CAATTCACTGTTGCAGTATAGAAAATTTTCTGGATGCTTGAAATCTCGTTATCAAGTGGATGTCAAAGCATGGTATGGAAAGTTTTTGAGCATTGTGAAAACCCAAGAAAGTAATAAAATACTCGTCAAGATTGTCAAAGACAAAATGATGAACTCCCCATTAAGAGATTTGGCTCGTCAAAGACAAAATGATGAACTCA
CCATAAATAGATTCGTGTCTCTTCATTTCCCCGTCTGTTGGGATGCTTGTGAAATATTCTATATGATGGAAGGATTACCTAGCTGCATTTCTTTCATTCGGGCTTGCCATGGGGAACAAAGTTCAGTTTTTTCCAAATTTGTTTTTCTCCTGTAGTATTCAGAAGGAATGTTGACATTCTTGAAGTCGTGCAAATTTGCC
TCTTATATTTAATTTCATTCTTCATAGTAATTTCTCATTGTTTTTTAGTCTTTTATAGGATTATTGAGGCAGAAGCTATTGGTGCATAACAAATATTGCGCCACAAATATTGCAAAAAAAAAAAGAGAACATGTAAGGCTTGGGTGATTATCAAAGTTTGCTTTGCGAATTTTGAGATTTATAAATTGATTAAGCCAAAG
GCGGGATTGAAATTTAAACCCCG
Intron 3 GTAAGAGTCA ... TTCTTCTCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 39.29 | 17 | 14 | 8 |
| A2 | 42.86 | 12 | 14 | 4 |
| A3 | 60 | 3 | 7 | 2 |
| A4 | 41.18 | 5 | 4 | 3 |
| A5 | 42.86 | 4 | 5 | 1 |
| A6 | 44.93 | 38 | 24 | 38 |
| A7 | 46.58 | 39 | 32 | 36 |
| A8 | 53.21 | 51 | 69 | 47 |
| A9 | 47.37 | 40 | 46 | 26 |
| A10 | 46.15 | 28 | 32 | 16 |
>TRINITY_DN43352_c0_g1_i3 from sample A10 / Example spliced isoformTAATGAAGAGCGCCATAGTCGTAAATTTTATTGTGTGATTGAAGCTTGCTATGGATTCGGTTTTCGTTGTGGTTGTCAGTGTCCGCGTGGTCTGATGAAGGAGAAGGAATGGGCCGAGGTTTGGGTTTGAGTTTTAGTGTGAGAGCGTGGTCGTCGTCGTTGTGTGCGTCCCTTCCGACTCATACATATATTCTTCCTTC
CTTCCACTTTCTCAAAAACACATTTGCATCCAAATCCTATTCTTCTTCTTCTTTGTCAAATCTCAAATACAGAAGAAGAACCAAAGGCCTAACTCGTGACAGAGAGGGTAGCAGGAGGGGAATGAACAGAATGGTGGGCGCAAGCAGTGTGAAGGAAAGCATCGAGCTAACAGAGTTGGAGAAGAAAATATTCGATAGAC
TAAGGGAGGTGCTGCGCGAGTTCAATCTTCAAACACAACTACGCGTTGCAGGAGGTTGGGTTCGTGACAAGCTTTTGGGAAAGGACTGTTATGATATCGATATTGCTTTGGACAACATGTTAGGTCGAGAATTTTGTGAGAAGGTCAATGGATATTTGTCAAAAGCTGGAGAGAAAACTCAGGGAGTTGGTGTCATTCAA
TGCAACCCAGATCAATCAAAACACCTGGAGACTGCAAGAATGCGTATTTTTGATGTCTGGATTGACTTTGTCAATCTTCGATCTGAAACATATGCAGAGCACAGTCGTATTCCTTCCATGGAATTTGGAACAGCTGAACAAGATGCATATAGAAGGGATTTGACAATCAACAGCTTGTTCTACAATATAAACACAGGTTC
TGTGGAGGACTTGACTGGAAGAGGTATATCGGATTTAAAAGCTGGAGTTATAGCTACACCTTTACCACCCAAGGCCACATTTCTGGATGATCCCTTACGTGTTCTGCGAGCAGTTCGATTTGGGGCACGGTTTGATTTTAACCTGGATAATGAATTAAAGAAGGCAGCTACTGAGGAAGAGGTGAAAAATGCATTGGCTA
GCAAAATCAGTCGTGAACGGATTGGTCATGAGATTGATCTGATGCTTTCTGGCAATCAACCCGTCAAGGCAATTAGCCAGCTTAAAGATTTGCAGTTATTCTGGACTGTATTCAGTCTTCCTCAAAGTGTGGGCAATGAGTTGCCTGAGGATTGTGAAAGTCTCTGTTGCAAATGCATGGATGCTATTTGGGAAGTTCTT
GGTAAAGTTGGATCTTCAATATTCAATGAAGAACACAGAAGATTGTGTTCATATAGTGCTTTATTCTTGCCCTTAAGGAAAGAAAATTATGCAGATCGCAAAGGAAAATTGATTCCTGTAGCAAATGCAATCATCAGAGATTCTCTAAAGCTGAAGGCTGATGATGCGGAAAAGGTACTGAGCTTACATAATGCTGCTGA
GGAATTCTTTCTCCTGATTGATTTACTAATCTCAGGCGAAGGTACGATTGCCCACAAAAAATGCACAGATGAGATGGAAGATTGGGATGTCTCCTTAAAGTCAAAGCAACGGATCCAGGCAGGTTTGCTCCTGATCAAGATTAAGGCATTATGGCGGGTGGCTTTGTTACTTTCAACTGTGATAAGATACCCTATTTCTG
AGTGCTCTGAAGTTCAGGAGTGCAAAGCATTAGTGGAGAAAAGGGCTTTGCTGTACACATCTGTTGAGAAGTCTGTTTTACAATTAGAGCTAGAAAATGTGTGGGAAATGAAGCGTTTACTGGATGGGAAAGTCATTATGAGTGTTTTAGGACTTAAAATTGGAGGGCCGCTGGTGAAGCAATGGCAAGAAGAAATACTT
AAATGGCAACTGGCTAATCCATCCGGTACAGCAGAAGAATGCCTTGATTGGCTTCAACAGGCTAATGCAAAGCGAATGAAAACTCATTGAAGTCATGCCTAGATTGAGGGTAGGCGATAATGAAAATAGTGAGAATTAAAGGGAGATTTTGAAACTTATCCCAAAACGACATACAAGCAATTCACTGTTGCAGTATAGAA
AATTTTCTGGATGCTTGAAATCTCGTTATCAAGTGGATGTCAAAGCATGGTATGGAAAGTTTTTGAGCATTGTGAAAACCCAAGAAAGTAATAAAATACTCGTCAAGATTATCAAAGACAAAATGATGAACTCCCCATTAAGAGATTTGGCTCGTCAAAGACAAAATGATGAACTCACCATAAATAGATTCGGGTCTCTT
CATTTCCCCGTCTGTTGGGATGCTTGTGAAATATTCTATATGATGGAAGGATTACCTAGCTGCATTTCTTTCATTCGGGCTTGCCATGGGGAACAAAGTTCAGTTTTTTCCAAATTTGTTTTTCTCCTGTAGTATTCAGAAGGAATGTTGACATTCTTGAAGTCGTGCAAATTTGCCTCTTATATTTAATTTCATTCTTC
ATAGTAATTTCTCATTGTTTTTTAGTCTTTTATAGGATTATTGAGGCAGAAGCTATTGGTGCATAACAAATATTGCGCCACAAATATTGCAAAAAAAAAAGAGAACATGTAAGGCTTGGGTGATTATCAAAGTTTGCTTTGCGAATTTTGAGATTTATAAATTGATTAAGCCAAAGGCGGGATTGAAATTTAAAC
>TRINITY_DN43352_c0_g1_i1 from sample A10 / Example unspliced isoform:TAATGAAGAGCGCCATAGTCGTAAATTTTATTGTGTGATTGAAGCTTGCTATGGATTCGGTTTTCGTTGTGGTTGTCAGTGTCCGCGTGGTCTGATGAAGGAGAAGGAATGGGCCGAGGTTTGGGTTTGAGTTTTAGTGTGAGAGCGTGGTCGTCGTCGTTGTGTGCGTCCCTTCCGACTCATACATATATTCTTCCTTC
CTTCCACTTTCTCAAAAACACATTTGCATCCAAATCCTATTCTTCTTCTTCTTTGTCAAATCTCAAATACAGAAGAAGAACCAAAGGCCTAACTCGTGACAGAGAGGGTAGCAGGAGGGGAATGAACAGAATGGTGGGCGCAAGCAGTGTGAAGGAAAGCATCGAGCTAACAGAGTTGGAGAAGAAAATATTCGATAGAC
TAAGGGAGGTGCTGCGCGAGTTCAATCTTCAAACACAACTACGCGTTGCAGGAGGTTGGGTTCGTGACAAGCTTTTGGGAAAGGACTGTTATGATATCGATATTGCTTTGGACAACATGTTAGGTCGAGAATTTTGTGAGAAGGTCAATGGATATTTGTCAAAAGCTGGAGAGAAAACTCAGGGAGTTGGTGTCATTCAA
TGCAACCCAGATCAATCAAAACACCTGGAGACTGCAAGAATGCGTATTTTTGATGTCTGGATTGACTTTGTCAATCTTCGATCTGAAACATATGCAGAGCACAGTCGTATTCCTTCCATGGAATTTGGAACAGCTGAACAAGATGCATATAGAAGGGATTTGACAATCAACAGCTTGTTCTACAATATAAACACAGGTTC
TGTGGAGGACTTGACTGGAAGAGGTATATCGGATTTAAAAGCTGGAGTTATAGCTACACCTTTACCACCCAAGGCCACATTTCTGGATGATCCCTTACGTGTTCTGCGAGCAGTTCGATTTGGGGCACGGTTTGATTTTAACCTGGATAATGAATTAAAGAAGGCAGCTACTGAGGAAGAGGTGAAAAATGCATTGGCTA
GCAAAATCAGTCGTGAACGGATTGGTCATGAGATTGATCTGATGCTTTCTGGCAATCAACCCGTCAAGGCAATTAGCCAGCTTAAAGATTTGCAGTTATTCTGGACTGTATTCAGTCTTCCTCAAAGTGTGGGCAATGAGTTGCCTGAGGATTGTGAAAGTCTCTGTTGCAAATGCATGGATGCTATTTGGGAAGTTCTT
GGTAAAGTTGGATCTTCAATATTCAATGAAGAACACAGAAGATTGTGTTCATATAGTGCTTTATTCTTGCCCTTAAGGAAAGAAAATTATGCAGATCGCAAAGGAAAATTGATTCCTGTAGCAAATGCAATCATCAGAGATTCTCTAAAGCTGAAGGCTGATGATGCGGAAAAGGTACTGAGCTTACATAATGCTGCTGA
GGAATTCTTTCTCCTGATTGATTTACTAATCTCAGGCGAAGGTACGATTGCCCACAAAAAATGCACAGATGAGATGGAAGATTGGGATGTCTCCTTAAAGTCAAAGCAACGGATCCAGGCAGGTTTGCTCCTGATCAAGATTAAGGCATTATGGCGGGTGGCTTTGTTACTTTCAACTGTGATAAGATACCCTATTTCTG
AGTGCTCTGAAGTTCAGGAGTGCAAAGCATTAGTGGAGAAAAGGGCTTTGCTGTACACATCTGTTGAGAAGTCTGTTTTACAATTAGAGCTAGAAAATGTGTGGGAAATGAAGCGTTTACTGGATGGGAAAGTCATTATGAGTGTTTTAGGACTTAAAATTGGAGGGCCGCTGGTGAAGCAATGGCAAGAAGAAATACTT
AAATGGCAACTGGCTAATCCATCCGGTACAGCAGAAGAATGCCTTGATTGGCTTCAACAGGCTAATGCAAAGCGAATGAAAACTCATTGAAGTCATGCCTAGATTGAGGGTAGGCGATAATGAAAATAGTGAGAATTAAAGGGAGATTTTGAAACTTATCCCAAgtaagagtcaagaaaggaggaaatcgtttaaagggt
aatttactaatttgggaccaagcaaccaactaaacactgagaattttatgcatcaaagctcaggtttcttgcatgtattgatgtttccttctaaatcaaactaatttatcctcattctttggttcttctcagAACGACATACAAGCAATTCACTGTTGCAGTATAGAAAATTTTCTGGATGCTTGAAATCTCGTTATCAA
GTGGATGTCAAAGCATGGTATGGAAAGTTTTTGAGCATTGTGAAAACCCAAGAAAGTAATAAAATACTCGTCAAGATTATCAAAGACAAAATGATGAACTCCCCATTAAGAGATTTGGCTCGTCAAAGACAAAATGATGAACTCACCATAAATAGATTCGGGTCTCTTCATTTCCCCGTCTGTTGGGATGCTTGTGAAAT
ATTCTATATGATGGAAGGATTACCTAGCTGCATTTCTTTCATTCGGGCTTGCCATGGGGAACAAAGTTCAGTTTTTTCCAAATTTGTTTTTCTCCTGTAGTATTCAGAAGGAATGTTGACATTCTTGAAGTCGTGCAAATTTGCCTCTTATATTTAATTTCATTCTTCATAGTAATTTCTCATTGTTTTTTAGTCTTTTA
TAGGATTATTGAGGCAGAAGCTATTGGTGCATAACAAATATTGCGCCACAAATATTGCAAAAAAAAAAGAGAACATGTAAGGCTTGGGTGATTATCAAAGTTTGCTTTGCGAATTTTGAGATTTATAAATTGATTAAGCCAAAGGCGGGATTGAAATTTAAAC
Intron 4 GTAATTTACT ... TTCTTCTCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 43.75 | 9 | 6 | 8 |
| A2 | 40.74 | 8 | 7 | 4 |
| A3 | 36.36 | 7 | 6 | 2 |
| A4 | 42.86 | 2 | 0 | 3 |
| A5 | 25 | 3 | 1 | 1 |
| A6 | 39.13 | 42 | 16 | 38 |
| A7 | 34.91 | 55 | 23 | 36 |
| A8 | 39.84 | 74 | 51 | 47 |
| A9 | 31.55 | 64 | 33 | 26 |
| A10 | 41.3 | 27 | 22 | 16 |
>TRINITY_DN114697_c0_g1_i1 from sample A1 / Example spliced isoformTTCGGTTTTCGTTGTGGTTGTCAGTGTCCGCGTGGTCTGATGAAGGAGAAGGAATGGGCCGAGGTTTGGGTTTGAGTTTTAGTGTGAGAGCGTGGTCGTCGTCGTTGTGTGCGTCCCTTCCGACTCATACATATATTCTTCCTTCCTTCCACTTTCTCAAAAACACATTTGCATCCAAATCCTATTCTTCTTCTTCTTTG
TCAAATCTCAAATACAGAAGAAGAACCAAAGGCCTAACTCGTGACAGAGAGGGTAGCAGGAGGGGAATGAACAGAATGGTGGGCGCAAGCAGTGTGAAGGAAAGCATCGAGCTAACAGAGTTGGAGAAGAAAATATTCGATAGACTAAGGGAGGTGCTGCGCGAGTTCAATCTTCAAACACAACTACGCGTTGCAGGAGG
TTGGGTTCGTGACAAGCTTTTGGGAAAGGACTGTTATGATATCGATATTGCTTTGGACAACATGTTAGGTCGAGAATTTTGTGAGAAGGTCAATGGATATTTGTCAAAAGCTGGAGAGAAAACTCAGGGAGTTGGTGTCATTCAATGCAACCCAGATCAATCAAAACACCTGGAGACTGCAAGAATGCGTATTTTTGATG
TCTGGATTGACTTTGTCAATCTTCGATCTGAAACATATGCAGAGCACAGTCGTATTCCTTCCATGGAATTTGGAACAGCTGAACAAGATGCATATAGAAGGGATTTGACAATCAACAGCTTGTTCTACAATATAAACACAGGTTCTGTGGAGGACTTGACTGGAAGAGGTATATCGGATTTAAAAGCTGGAGTTATAGCT
ACACCTTTACCACCCAAGGCCACATTTCTGGATGATCCCTTACGTGTTCTGCGAGCAGTTCGATTTGGGGCACGGTTTGATTTTAACCTGGATAATGAATTAAAGAAGGCAGCTACTGAGGAAGAGGTGAAAAATGCATTGGCTAGCAAAATCAGTCGTGAACGGATTGGTCATGAGATTGATCTGATGCTTTCTGGCAA
TCAACCCGTCAAGGCAATTAGCCAGCTTAAAGATTTGCAGTTATTCTGGACTGTATTCAGTCTTCCTCAAAGTGTGGGCAATGAGTTGCCTGAGGATTGTGAAAGTCTCTGTTGCAAATGCATGGATGCTATTTGGGAAGTTCTTGGTAAAGTTGGATCTTCAATATTCAATGAAGAACACAGAAGATTGTGTTCATATA
GTGCTTTATTCTTGCCCTTAAGGAAAGAAAATTATGCAGATCGCAAAGGAAAATTGATTCCTGTAGCAAATGCAATCATCAGAGATTCTCTAAAGCTGAAGGCTGATGATGCGGAAAAGGTACTGAGCTTACATAATGCTGCTGAGGAATTCTTTCTCCTGATTGATTTACTAATCTCAGGCGAAGGTACGATTGCCCAC
AAAAAATGCACAGATGAGATGGAAGATTGGGATGTCTCCTTAAAGTCAAAGCAACGGATCCAGGCAGGTTTGCTCCTGATCAAGATTAAGGCATTATGGCGGGTGGCTTTGTTACTTTCAACTGTGATAAGATACCCTATTTCTGAGTGCTCTGAAGTTCAGGAGTGCAAAGCATTAGTGGAGAAAAGGGCTTTGCTGTA
CACATCTGTTGAGAAGTCTGTTTTACAATTAGAGCTAGAAAATGTGTGGGAAATGAAGCGTTTACTGGATGGGAAAGTCATTATGAGTGTTTTAGGACTTAAAATTGGAGGGCCGCTGGTGAAGCAATGGCAAGAAGAAATACTTAAATGGCAACTGGCTAATCCATCCGGTACAGCAGAAGAATGCCTTGATTGGCTTC
AACAGGCTAATGCAAAGCGAATGAAAACTCATTGAAGTCATGCCTAGATTGAGGGTAGGCGATAATGAAAATAGTGAGAATTAAAGGGAGATTTTGAAACTTATCCCAAGTAAGAGTCAAGAAAGGAGGAAATCGTTTAAAGGAACGACATACAAGCAATTCACTGTTGCAGTATAGAAAATTTTCTGGATGCTTGAAAT
CTCGTTATCAAGTGGATGTCAAAGCATGGTATGGAAAGTTTTTGAGCATTGTGAAAACCCAAGAAAGTAATAAAATACTCGTCAAGATTATCAAAGACAAAATGATGAACTCCCCATTAAGAGATTTGGCTCGTCAAAGACAAAATGATGAACTCACCATAAATAGATTCGGGTCTCTTCATTTCCCCGTCTGTTGGGAT
GCTTGTGAAATATTCTATATGATGGAAGGATTACCTAGCTGCATTTCTTTCATTCGGGCTTGCCATGGGGAACAAAGTTCAGTTTTTTCCAAATTTGTTTTTCTCCTGTAGTATTCAGAAGGAATGTTGACATTCTTGAAGTCGTGCAAATTTGCCTCTTATATTTAATTTCATTCTTCATAGTAATTTCTCATTGTTTT
TTAGTCTTTTATAGGATTATTGAGGCAGAAGCTATTGGTGCATAACAAATATTGCGCCACAAATATTGCAAAAAAAAAAGAGAACATGTAAGGCTTGGGTGATTATCAAAGTTTGCTTTGCGAATTTTGAGATTTATAAATTGATTAAGCCAAAGGCGGGATTGAAATTTAA
>TRINITY_DN114697_c0_g1_i4 from sample A1 / Example unspliced isoform:TTCGGTTTTCGTTGTGGTTGTCAGTGTCCGCGTGGTCTGATGAAGGAGAAGGAATGGGCCGAGGTTTGGGTTTGAGTTTTAGTGTGAGAGCGTGGTCGTCGTCGTTGTGTGCGTCCCTTCCGACTCATACATATATTCTTCCTTCCTTCCACTTTCTCAAAAACACATTTGCATCCAAATCCTATTCTTCTTCTTCTTTG
TCAAATCTCAAATACAGAAGAAGAACCAAAGGCCTAACTCGTGACAGAGAGGGTAGCAGGAGGGGAATGAACAGAATGGTGGGCGCAAGCAGTGTGAAGGAAAGCATCGAGCTAACAGAGTTGGAGAAGAAAATATTCGATAGACTAAGGGAGGTGCTGCGCGAGTTCAATCTTCAAACACAACTACGCGTTGCAGGAGG
TTGGGTTCGTGACAAGCTTTTGGGAAAGGACTGTTATGATATCGATATTGCTTTGGACAACATGTTAGGTCGAGAATTTTGTGAGAAGGTCAATGGATATTTGTCAAAAGCTGGAGAGAAAACTCAGGGAGTTGGTGTCATTCAATGCAACCCAGATCAATCAAAACACCTGGAGACTGCAAGAATGCGTATTTTTGATG
TCTGGATTGACTTTGTCAATCTTCGATCTGAAACATATGCAGAGCACAGTCGTATTCCTTCCATGGAATTTGGAACAGCTGAACAAGATGCATATAGAAGGGATTTGACAATCAACAGCTTGTTCTACAATATAAACACAGGTTCTGTGGAGGACTTGACTGGAAGAGGTATATCGGATTTAAAAGCTGGAGTTATAGCT
ACACCTTTACCACCCAAGGCCACATTTCTGGATGATCCCTTACGTGTTCTGCGAGCAGTTCGATTTGGGGCACGGTTTGATTTTAACCTGGATAATGAATTAAAGAAGGCAGCTACTGAGGAAGAGGTGAAAAATGCATTGGCTAGCAAAATCAGTCGTGAACGGATTGGTCATGAGATTGATCTGATGCTTTCTGGCAA
TCAACCCGTCAAGGCAATTAGCCAGCTTAAAGATTTGCAGTTATTCTGGACTGTATTCAGTCTTCCTCAAAGTGTGGGCAATGAGTTGCCTGAGGATTGTGAAAGTCTCTGTTGCAAATGCATGGATGCTATTTGGGAAGTTCTTGGTAAAGTTGGATCTTCAATATTCAATGAAGAACACAGAAGATTGTGTTCATATA
GTGCTTTATTCTTGCCCTTAAGGAAAGAAAATTATGCAGATCGCAAAGGAAAATTGATTCCTGTAGCAAATGCAATCATCAGAGATTCTCTAAAGCTGAAGGCTGATGATGCGGAAAAGGTACTGAGCTTACATAATGCTGCTGAGGAATTCTTTCTCCTGATTGATTTACTAATCTCAGGCGAAGGTACGATTGCCCAC
AAAAAATGCACAGATGAGATGGAAGATTGGGATGTCTCCTTAAAGTCAAAGCAACGGATCCAGGCAGGTTTGCTCCTGATCAAGATTAAGGCATTATGGCGGGTGGCTTTGTTACTTTCAACTGTGATAAGATACCCTATTTCTGAGTGCTCTGAAGTTCAGGAGTGCAAAGCATTAGTGGAGAAAAGGGCTTTGCTGTA
CACATCTGTTGAGAAGTCTGTTTTACAATTAGAGCTAGAAAATGTGTGGGAAATGAAGCGTTTACTGGATGGGAAAGTCATTATGAGTGTTTTAGGACTTAAAATTGGAGGGCCGCTGGTGAAGCAATGGCAAGAAGAAATACTTAAATGGCAACTGGCTAATCCATCCGGTACAGCAGAAGAATGCCTTGATTGGCTTC
AACAGGCTAATGCAAAGCGAATGAAAACTCATTGAAGTCATGCCTAGATTGAGGGTAGGCGATAATGAAAATAGTGAGAATTAAAGGGAGATTTTGAAACTTATCCCAAGTAAGAGTCAAGAAAGGAGGAAATCGTTTAAAGGgtaatttactaatttgggaccaagcaaccaactaaacactgagaattttatgcatca
aagctcaggtttcttgcatgtattgatgtttccttctaaatcaaactaatttatcctcattctttggttcttctcagAACGACATACAAGCAATTCACTGTTGCAGTATAGAAAATTTTCTGGATGCTTGAAATCTCGTTATCAAGTGGATGTCAAAGCATGGTATGGAAAGTTTTTGAGCATTGTGAAAACCCAAGAAA
GTAATAAAATACTCGTCAAGATTATCAAAGACAAAATGATGAACTCCCCATTAAGAGATTTGGCTCGTCAAAGACAAAATGATGAACTCACCATAAATAGATTCGGGTCTCTTCATTTCCCCGTCTGTTGGGATGCTTGTGAAATATTCTATATGATGGAAGGATTACCTAGCTGCATTTCTTTCATTCGGGCTTGCCAT
GGGGAACAAAGTTCAGTTTTTTCCAAATTTGTTTTTCTCCTGTAGTATTCAGAAGGAATGTTGACATTCTTGAAGTCGTGCAAATTTGCCTCTTATATTTAATTTCATTCTTCATAGTAATTTCTCATTGTTTTTTAGTCTTTTATAGGATTATTGAGGCAGAAGCTATTGGTGCATAACAAATATTGCGCCACAAATAT
TGCAAAAAAAAAAGAGAACATGTAAGGCTTGGGTGATTATCAAAGTTTGCTTTGCGAATTTTGAGATTTATAAATTGATTAAGCCAAAGGCGGGATTGAAATTTAA
Intron 5 GTAGGCGATA ... TTCTTCTCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 55.17 | 13 | 24 | 8 |
| A2 | 54.17 | 11 | 22 | 4 |
| A3 | 40.74 | 8 | 9 | 2 |
| A4 | 57.89 | 4 | 8 | 3 |
| A5 | 44.44 | 10 | 15 | 1 |
| A6 | 46.45 | 49 | 47 | 38 |
| A7 | 49.49 | 50 | 62 | 36 |
| A8 | 47.62 | 88 | 113 | 47 |
| A9 | 50 | 52 | 78 | 26 |
| A10 | 51.94 | 31 | 51 | 16 |
>TRINITY_DN46784_c2_g1_i4 from sample A7 / Example spliced isoformATGAAGAGCGCCATAGTCGTAAATTTTATTGTGTGATTGAAGCTTGCTATGGATTCGGTTTTCGTTGTGGTTGTCAGTGTCCGCGTGGTCTGATGAAGGAGAAGGAATGGGCCGAGGTTTGGGTTTGAGTTTTAGTGTGAGAGCGTGGTCGTCGTCGTTGTGTGCGTCCCTTCCGACTCATACATATATTCTTCCTTCCT
TCCACTTTCTCAAAAACACATTTGCATCCAAATCCTATTCTTCTTCTTCTTTGTCAAATCTCAAATACAGAAGAAGAACCAAAGGCCTAACTCGTGACAGAGAGGGTAGCAGGAGGGGAATGAACAGAATGGTGGGCGCAAGCAGTGTGAAGGAAAGCATCGAGCTAACAGAGTTGGAGAAGAAAATATTCGATAGACTA
AGGGAGGTGCTGCGCGAGTTCAATCTTCAAACACAACTACGCGTTGCAGGAGGTTGGGTTCGTGACAAGCTTTTGGGAAAGGACTGTTATGATATCGATATTGCTTTGGACAACATGTTAGGTCGAGAATTTTGTGAGAAGGTCAATGGATATTTGTCAAAAGCTGGAGAGAAAACTCAGGGAGTTGGTGTCATTCAATG
CAACCCAGATCAATCAAAACACCTGGAGACTGCAAGAATGCGTATTTTTGATGTCTGGATTGACTTTGTCAATCTTCGATCTGAAACATATGCAGAGCACAGTCGTATTCCTTCCATGGAATTTGGAACAGCTGAACAAGATGCATATAGAAGGGATTTGACAATCAACAGCTTGTTCTACAATATAAACACAGGTTCTG
TGGAGGACTTGACTGGAAGAGGTATATCGGATTTAAAAGCTGGAGTTATAGCTACACCTTTACCACCCAAGGCCACATTTCTGGATGATCCCTTACGTGTTCTGCGAGCAGTTCGATTTGGGGCACGGTTTGATTTTAACCTGGATAATGAATTAAAGAAGGCAGCTACTGAGGAAGAGGTGAAAAATGCATTGGCTAGC
AAAATCAGTCGTGAACGGATTGGTCATGAGATTGATCTGATGCTTTCTGGCAATCAACCCGTCAAGGCAATTAGCCAGCTTAAAGATTTGCAGTTATTCTGGACTGTATTCAGTCTTCCTCAAAGTGTGGGCAATGAGTTGCCTGAGGATTGTGAAAGTCTCTGTTGCAAATGCATGGATGCTATTTGGGAAGTTCTTGG
TAAAGTTGGATCTTCAATATTCAATGAAGAACACAGAAGATTGTGTTCATATAGTGCTTTATTCTTGCCCTTAAGGAAAGAAAATTATGCAGATCGCAAAGGAAAATTGATTCCTGTAGCAAATGCAATCATCAGAGATTCTCTAAAGCTGAAGGCTGATGATGCGGAAAAGGTACTGAGCTTACATAATGCTGCTGAGG
AATTCTTTCTCCTGATTGATTTACTAATCTCAGGCGAAGGTACGATTGCCCACAAAAAATGCACAGATGAGATGGAAGATTGGGATGTCTCCTTAAAGTCAAAGCAACGGATCCAGGCAGGTTTGCTCCTGATCAAGATTAAGGCATTATGGCGGGTGGCTTTGTTACTTTCAACTGTGATAAGATACCCTATTTCTGAG
TGCTCTGAAGTTCAGGAGTGCAAAGCATTAGTGGAGAAAAGGGCTTTGCTGTACACATCTGTTGAGAAGTCTGTTTTACAATTAGAGCTAGAAAATGTGTGGGAAATGAAGCGTTTACTGGATGGGAAAGTCATTATGAGTGTTTTAGGACTTAAAATTGGAGGGCCGCTGGTGAAGCAATGGCAAGAAGAAATACTTAA
ATGGCAACTGGCTAATCCATCCGGTACAGCAGAAGAATGCCTTGATTGGCTTCAACAGGCTAATGCAAAGCGAATGAAAACTCATTGAAGTCATGCCTAGATTGAGGAACGACATACAAGCAATTCACTGTTGCAGTATAGAAAATTTTCTGGATGCTTGAAATCTCGTTATCAAGTGGATGTCAAAGCATGGTATGGAA
AGTTTTTGAGCATTGTGAAAACCCAAGAAAGTAATAAAATACTCGTCAAGATTATCAAAGACAAAATGATGAACTCCCCATTAAGAGATTTGGCTCGTCAAAGACAAAATGATGAACTCACCATAAATAGATTCGGGTCTCTTCATTTCCCCGTCTGTTGGGATGCTTGTGAAATATTCTATATGATGGAAGGATTACCT
AGCTGCATTTCTTTCATTCGGGCTTGCCATGGGGAACAAAGTTCAGTTTTTTCCAAATTTGTTTTTCTCCTGTAGTATTCAGAAGGAATGTTGACATTCTTGAAGTCGTGCAAATTTGCCTCTTATATTTAATTTCATTCTTCATAGTAATTTCTCATTGTTTTTTAGTCTTTTATAGGATTATTGAGGCAGAAGCTATT
GGTGCATAACAAATATTGCGCCACAAATATTGCAAAAAAAAAAGAGAACATGTAAGGCTTGGGTGATTATCAAAGTTTGCTTTGCGAATTTTGAGATTTATAAATTGATTAAGCCAAAGGCGGGATTGAAATTTAAACCCCAG
>TRINITY_DN46784_c2_g1_i1 from sample A7 / Example unspliced isoform:ATGAAGAGCGCCATAGTCGTAAATTTTATTGTGTGATTGAAGCTTGCTATGGATTCGGTTTTCGTTGTGGTTGTCAGTGTCCGCGTGGTCTGATGAAGGAGAAGGAATGGGCCGAGGTTTGGGTTTGAGTTTTAGTGTGAGAGCGTGGTCGTCGTCGTTGTGTGCGTCCCTTCCGACTCATACATATATTCTTCCTTCCT
TCCACTTTCTCAAAAACACATTTGCATCCAAATCCTATTCTTCTTCTTCTTTGTCAAATCTCAAATACAGAAGAAGAACCAAAGGCCTAACTCGTGACAGAGAGGGTAGCAGGAGGGGAATGAACAGAATGGTGGGCGCAAGCAGTGTGAAGGAAAGCATCGAGCTAACAGAGTTGGAGAAGAAAATATTCGATAGACTA
AGGGAGGTGCTGCGCGAGTTCAATCTTCAAACACAACTACGCGTTGCAGGAGGTTGGGTTCGTGACAAGCTTTTGGGAAAGGACTGTTATGATATCGATATTGCTTTGGACAACATGTTAGGTCGAGAATTTTGTGAGAAGGTCAATGGATATTTGTCAAAAGCTGGAGAGAAAACTCAGGGAGTTGGTGTCATTCAATG
CAACCCAGATCAATCAAAACACCTGGAGACTGCAAGAATGCGTATTTTTGATGTCTGGATTGACTTTGTCAATCTTCGATCTGAAACATATGCAGAGCACAGTCGTATTCCTTCCATGGAATTTGGAACAGCTGAACAAGATGCATATAGAAGGGATTTGACAATCAACAGCTTGTTCTACAATATAAACACAGGTTCTG
TGGAGGACTTGACTGGAAGAGGTATATCGGATTTAAAAGCTGGAGTTATAGCTACACCTTTACCACCCAAGGCCACATTTCTGGATGATCCCTTACGTGTTCTGCGAGCAGTTCGATTTGGGGCACGGTTTGATTTTAACCTGGATAATGAATTAAAGAAGGCAGCTACTGAGGAAGAGGTGAAAAATGCATTGGCTAGC
AAAATCAGTCGTGAACGGATTGGTCATGAGATTGATCTGATGCTTTCTGGCAATCAACCCGTCAAGGCAATTAGCCAGCTTAAAGATTTGCAGTTATTCTGGACTGTATTCAGTCTTCCTCAAAGTGTGGGCAATGAGTTGCCTGAGGATTGTGAAAGTCTCTGTTGCAAATGCATGGATGCTATTTGGGAAGTTCTTGG
TAAAGTTGGATCTTCAATATTCAATGAAGAACACAGAAGATTGTGTTCATATAGTGCTTTATTCTTGCCCTTAAGGAAAGAAAATTATGCAGATCGCAAAGGAAAATTGATTCCTGTAGCAAATGCAATCATCAGAGATTCTCTAAAGCTGAAGGCTGATGATGCGGAAAAGGTACTGAGCTTACATAATGCTGCTGAGG
AATTCTTTCTCCTGATTGATTTACTAATCTCAGGCGAAGGTACGATTGCCCACAAAAAATGCACAGATGAGATGGAAGATTGGGATGTCTCCTTAAAGTCAAAGCAACGGATCCAGGCAGGTTTGCTCCTGATCAAGATTAAGGCATTATGGCGGGTGGCTTTGTTACTTTCAACTGTGATAAGATACCCTATTTCTGAG
TGCTCTGAAGTTCAGGAGTGCAAAGCATTAGTGGAGAAAAGGGCTTTGCTGTACACATCTGTTGAGAAGTCTGTTTTACAATTAGAGCTAGAAAATGTGTGGGAAATGAAGCGTTTACTGGATGGGAAAGTCATTATGAGTGTTTTAGGACTTAAAATTGGAGGGCCGCTGGTGAAGCAATGGCAAGAAGAAATACTTAA
ATGGCAACTGGCTAATCCATCCGGTACAGCAGAAGAATGCCTTGATTGGCTTCAACAGGCTAATGCAAAGCGAATGAAAACTCATTGAAGTCATGCCTAGATTGAGGgtaggcgataatgaaaatagtgagaattaaagggagattttgaaacttatcccaagtaagagtcaagaaaggaggaaatcgtttaaagggtaa
tttactaatttgggaccaagcaaccaactaaacactgagaattttatgcatcaaagctcaggtttcttgcatgtattgatgtttccttctaaatcaaactaatttatcctcattctttggttcttctcagAACGACATACAAGCAATTCACTGTTGCAGTATAGAAAATTTTCTGGATGCTTGAAATCTCGTTATCAAGT
GGATGTCAAAGCATGGTATGGAAAGTTTTTGAGCATTGTGAAAACCCAAGAAAGTAATAAAATACTCGTCAAGATTATCAAAGACAAAATGATGAACTCCCCATTAAGAGATTTGGCTCGTCAAAGACAAAATGATGAACTCACCATAAATAGATTCGGGTCTCTTCATTTCCCCGTCTGTTGGGATGCTTGTGAAATAT
TCTATATGATGGAAGGATTACCTAGCTGCATTTCTTTCATTCGGGCTTGCCATGGGGAACAAAGTTCAGTTTTTTCCAAATTTGTTTTTCTCCTGTAGTATTCAGAAGGAATGTTGACATTCTTGAAGTCGTGCAAATTTGCCTCTTATATTTAATTTCATTCTTCATAGTAATTTCTCATTGTTTTTTAGTCTTTTATA
GGATTATTGAGGCAGAAGCTATTGGTGCATAACAAATATTGCGCCACAAATATTGCAAAAAAAAAAGAGAACATGTAAGGCTTGGGTGATTATCAAAGTTTGCTTTGCGAATTTTGAGATTTATAAATTGATTAAGCCAAAGGCGGGATTGAAATTTAAACCCCAG