sp|Q9FMV0|FBL91_ARATH ----> F-box/LRR-repeat protein At5g63520
Intron 1 GTAAGCTTCA ... ACTCTTGCAG
Found issues: Low number of reads
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 16.67 | 5 | 1 | 0 |
| A2 | 50 | 6 | 6 | 1 |
| A3 | 33.33 | 4 | 2 | 0 |
| A4 | 28.57 | 5 | 2 | 0 |
| A5 | 50 | 2 | 2 | 0 |
| A6 | 25 | 6 | 2 | 0 |
| A7 | 18.18 | 9 | 2 | 0 |
| A8 | 33.33 | 4 | 2 | 0 |
| A9 | 37.5 | 5 | 3 | 0 |
| A10 | 0 | 4 | 0 | 0 |
>TRINITY_DN102866_c0_g2_i4 from sample A2 / Example spliced isoformCCACATTCCAAAAGCTTGAATAAGTTAGCGAGGGCTCGGATTAGGCTTTTCTGTGAAAGAGAGAGACATTACAATGCAAAGACGAGGTGGAGGTGGAGGGGGACGTGGAGGGGGTTCGATGCCGAATTGTTTGGGCGACGATGTGATAAATGACATAATGAAGAGGCTTCCGGCTAGATCCATGGCCTGTGCGGCGTGCG
TCTGCCGCAGCTGGCGTAATCATGCCGCCAAAATTCTTTCTACTCCGAAATTAATATCGGCGCTATCTCAGAATCCACAATTGGAGGCTGCCATGGATGAGATTATGGAGAAGATACTTGAAAAACCAATTCGGCCAGACTTTGCAATTGCCTTTGCTGGCCAGAAGTTCAGCTTGTCAAGGATCTCCAGCCTTCTGAAA
AAGAATTTAGGTTCAAGAATCCCCACTATTGCATGTTTTGCTCCGGGTATAATTGGTCCAGATGCAATCACCAAGGAACAAAAGGAGGTGAAGTGGCGACAGCCAGTTTTTGAGACAAGCAAAACTGCTCGTCGCAGGATTATTGCTGAGCAACATGGCCTTGTTGTCACCATTGGACATTTCCCTGGTTTGCATATAGA
GGCAGTTCCTTTACACAATTCCTTTGTGGAAGAGGAGGTCAATTCCTTTGTGGCTAGTTTGGTGAATTATGCATCATCATTGTCAAATGATAGACATCCGTTGGCGATGATATTGTTAGCAGATCCACAAGCGAACATTAGGCATACATTGGAAAGTCTTGACGAGGGCCTATGCGGGAACACTGTCATAGTAGGAGGGC
TGGCTGCAGAACATGAGGGAGCTTGTCTTTCTTTGAATAGTCGAGAAAATTCAAAAATTGTTGATGAATATCAATCATCTAATACATGTGGAGTGGCTTCAACTTCAATAAGAAATCATAAGGGCAGCAAGTTGCAAGGGCAAGGTTCTTCTAGTTACGATGCTGTTACACTTGTATTTGCAAAAGGGAAGAATGGGTTT
CATGGTTCTGGAAGTATCGACTTCAGCCCTGCTGTCTCAGCAGGAATAGCACCTGCAGGTCCTATCTACAAGGCAATTTCTGTAAAGCTTTCCAAAGATACTGTGAATAAGGAAACTTCTACATGGCTTACTTGTAGGAAGGAAGGAGACTTGGTAGAGCTTGATGGTCAGTCTGTACTTGATGACCTGGGTAATGAGGT
TTGTGAATGAATTATTTCCTTCTGCCATTTCCTTTTAAATTCTCTCAAGAAGCATGTAATTCACTATTACGTACATGTTTGATTCCAGCAAAGAAGTTAAAATGTCAATTAGAGGGACACATAATGGGAATAAACATA
>TRINITY_DN102866_c0_g2_i2 from sample A2 / Example unspliced isoform:CCACATTCCAAAAGCTTGAATAAGTTAGCGAGGGCTCGGATTAGGCTTTTCTGTGAAAGAGAGAGACATTACAATGCAAAGACGAGGTGGAGGTGGAGGGGGACGTGGAGGGGGTTCGATGCCGAATTGTTTGGGCGACGATGTGATAAATGACATAATGAAGAGGCTTCCGGCTAGATCCATGGCCTGTGCGGCGTGCG
TCTGCCGCAGCTGGCGTAATCATGCCGCCAAAATTCTTTCTACTCCGAAATTAATATCGGCGCTATCTCAGAATCCACAATTGGAGGCTGCCATGGATGAGATTATGGAGAAGATACTTGAAAAACCAATTCGGCCAGACTTTGCAATTGCCTTTGCTGGCCAGAAGTTCAGCTTGTCAAGGATCTCCAGCCTTCTGAAA
AAGAATTTAGGTTCAAGAATCCCCACTATTGCATGTTTTGCTCCGGGTATAATTGGTCCAGATGCAATCACCAAGGAACAAAAGGAGGTGAAGTGGCGACAGCCAGTTTTTGAGACAAGCAAAACTGCTCGTCGCAGGATTATTGCTGAGCAACATGGCCTTGTTGTCACCATTGGACATTTCCCTGGTTTGCATATAGA
GGCAGTTCCTTTACACAATTCCTTTGTGGAAGAGGAGGTCAATTCCTTTGTGGCTAGTTTGGTGAATTATGCATCATCATTGTCAAATGATAGACATCCGTTGGCGATGATATTGTTAGCAgtaagcttcatttgcctcccatcaaacaatgacagtagttttaagtttgggtcagaggttaactttgaattaacatgat
gggaaagaaatgatgatagtcaaatttagaagtaattgtattaagtcattcaagcttttttcttgcatactggaagtttttagatgaatctatgttatccatgagttcaacatcgttatactaattgtactcttgcagGATCCACAAGCGAACATTAGGCG
Intron 2 GTGATGTGTA ... TGCTTTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 64.71 | 3 | 8 | 3 |
| A2 | 37.5 | 5 | 6 | 0 |
| A3 | 100 | 0 | 1 | 11 |
| A4 | -1 | 0 | 0 | 0 |
| A5 | 100 | 0 | 5 | 5 |
| A6 | 69.14 | 18 | 48.7 | 32 |
| A7 | 68.49 | 16.3 | 54 | 17 |
| A8 | 65.62 | 20 | 55.3 | 21 |
| A9 | 72 | 7 | 25 | 11 |
| A10 | 72.97 | 5 | 12 | 15 |
>TRINITY_DN36273_c0_g1_i2 from sample A6 / Example spliced isoformGGAGGGGGACGTGGAGGGGGTTCGATGCCGAATTGTTTGGGCGACGATGTGATAAATGACATAATGAAGAGGCTTCCGGCTAGATCCATGGCCTGTGCGGCGTGCGTCTGCCGCAGCTGGCGTAATCATGCCGCCAAAATTCTTTCTACTCCGAAATTAATATCGGCGCTATCTCAGAATCCACAATTGGAGGCTGCCAT
GGATGAGATTATGGAGAAGATACTTGAAAAACCAATTCGGCCAGACTTTGCAATTGCCTTTGCTGGCCAGAAGTTCAGCTTGTCAAGGATCTCCAGCCTTCTGAAAAAGAATTTAGGTTCAAGAATCCCCACTATTGCATGTTTTGCTCCGGGTATAATTGGTCCAGATGCAATCACCAAGGAACAAAAGGAGGTGAAGT
GGCGACAGCCAGTTTTTGAGACAAGCAAAACTGCTCGTCGCAGGATTATTGCTGAGCAACATGGCCTTGTTGTCACCATTGGACATTTCCCTGGTTTGCATATAGAGGCAGTTCCTTTACACAATTCCTTTGTGGAAGAGGAGGTCAATTCCTTTGTGGCTAGTTTGGTGAATTATGCATCATCATTGTCAAATGATAGA
CATCCGTTGGCGATGATATTGTTAGCAGATCCACAAGCGAACATTAGGCATACATTGGAAAGTCTTGACGAGGGCCTATGCGGGAACACTGTCATAGTAGGAGGGCTGGCTGCAGAACATGAGGGAGCTTGTCTTTCTTTGAATAGTCGAGAAAATTCAAAAATTGTTGATGAATATCAATCATCTAATACATGTGGAGT
GGCTTCAACTTCAATAAGAAATCATAAGGGCAGCAAGTTGCAAGGGCAAGGTTCTTCTAGTTACGATGCTGTTACACTTGTATTTGCAAAAGGGAAGAATGGGTTTCATGGTTCTGGAAGTATCGACTTCAGCCCTGCTGTCTCAGCAGGAATAGCACCTGCAGGTCCTATCTACAAGGCAATTTCTGTAAAGCTTTCCA
AAGATACTGTGAATAAGGAAACTTCTACATGGCTTACTTGTAGGAAGGAAGGAGACTTGGTAGAGCTTGATGGTCAGTCTGTACTTGATGACCTGGGTAATGAGGTTGGAGGTGATATTTTAAGTGGAGGACTGTACATTGGAGTCTCAAAAGCGAGAAAGCGCTTTATGTCGTTAGGCAGAGGCAAAGCAGCAATTCCA
TTCACTATCCATGAAGTTTACGATGCAGATGAAGAGTACCTTTTTGTTGAAGGGGAGGGAATTAAAACTGGAGATGCGTTTCGTTTCTATAGAACTGATCCAGAAACAGGGAAGTCATCTAGCAATTTGGCATTAGAACAAGTATGCAAGCAGTTGAGATCTCCATTCCGGGAAAGAGTTCTTCCTGCAACAACAATTGA
AGTCATGCCCTGTACATTAAAACAGCGCTATCGTAAAGTTCTGGGTGGACTCCTGTTTGCTTGCAATTGTCGAGGACAATCATTTTTTGGTGAACCTAATGTCGACAGTTCAGCTTTTACTAGAAAATTTTCAGATGTACCAATAGCAGGCATGTTCTGTTTAGGAGAGATTGGGCCTCCATCTGTTCGCTCATGGGAGG
CTACAGAAGGAGGTGATACTACCAGCCGATTAAATGTTTACAGCTCCGTTTATATGGCATTTACTCATATTTCAGACTCTGCAAAGTGATGTCCCAATTACAATACATTCTCAGTGGCATTTGCAGACATTTGTTCGAGTACAACTCCTACATAGCTGTCATCCGGAACAAATTTTAATGTGCTAGGCAAAATGTTGGTG
CCTTGCATTTATGCAACAGAAAATATATATAGCAGTCTATTTTATAACCGACAAAATATGACATTGAGACAGACTCTATTCAATTTAGCTCGTTCAGTTATGATCGCATCTGCCCTCTGTACTCGGCCAAAGTAATACTTTACGTTCGTTGGCTCATTTATTTTTATGCACTCAATTGCTTGAGTGAAGGAGTGCCATTC
TCTTACTTCAAACCTTGAAGAACCATTGTGAAATATTTTGTGAAAAATGCAGTAAAATATGATATACAAAAATATAAATGTTTACTTGCAATGATGCTAGTTTCCACGTGAATCAAACACAAATTGATATACATATGTCGCCATGATGGTTTCATTGGA
>TRINITY_DN36273_c0_g1_i1 from sample A6 / Example unspliced isoform:GGAGGGGGACGTGGAGGGGGTTCGATGCCGAATTGTTTGGGCGACGATGTGATAAATGACATAATGAAGAGGCTTCCGGCTAGATCCATGGCCTGTGCGGCGTGCGTCTGCCGCAGCTGGCGTAATCATGCCGCCAAAATTCTTTCTACTCCGAAATTAATATCGGCGCTATCTCAGAATCCACAATTGGAGGCTGCCAT
GGATGAGATTATGGAGAAGATACTTGAAAAACCAATTCGGCCAGACTTTGCAATTGCCTTTGCTGGCCAGAAGTTCAGCTTGTCAAGGATCTCCAGCCTTCTGAAAAAGAATTTAGGTTCAAGAATCCCCACTATTGCATGTTTTGCTCCGGGTATAATTGGTCCAGATGCAATCACCAAGGAACAAAAGGAGGTGAAGT
GGCGACAGCCAGTTTTTGAGACAAGCAAAACTGCTCGTCGCAGGATTATTGCTGAGCAACATGGCCTTGTTGTCACCATTGGACATTTCCCTGGTTTGCATATAGAGGCAGTTCCTTTACACAATTCCTTTGTGGAAGAGGAGGTCAATTCCTTTGTGGCTAGTTTGGTGAATTATGCATCATCATTGTCAAATGATAGA
CATCCGTTGGCGATGATATTGTTAGCAGATCCACAAGCGAACATTAGGCATACATTGGAAAGTCTTGACGAGGGCCTATGCGGGAACACTGTCATAGTAGGAGGGCTGGCTGCAGAACATGAGGGAGCTTGTCTTTCTTTGAATAGTCGAGAAAATTCAAAAATTGTTGATGAATATCAATCATCTAATACATGTGGAGT
GGCTTCAACTTCAATAAGAAATCATAAGGGCAGCAAGTTGCAAGGGCAAGGTTCTTCTAGTTACGATGCTGTTACACTTGTATTTGCAAAAGGGAAGAATGGGTTTCATGGTTCTGGAAGTATCGACTTCAGCCCTGCTGTCTCAGCAGGAATAGCACCTGCAGGTCCTATCTACAAGGCAATTTCTGTAAAGCTTTCCA
AAGATACTGTGAATAAGGAAACTTCTACATGGCTTACTTGTAGGAAGGAAGGAGACTTGGTAGAGCTTGATGGTCAGTCTGTACTTGATGACCTGGGTAATGAGGTTGGAGGTGATATTTTAAGTGGAGGACTGTACATTGGAGTCTCAAAAGCGAGAAAGCGCTTTATGTCGTTAGGCAGAGGCAAAGCAGCAATTCCA
TTCACTATCCATGAAGTTTACGATGCAGATGAAGAGTACCTTTTTGTTGAAGGGGAGGGAATTAAAACTGGAGATGCGTTTCGTTTCTATAGAACTGATCCAGAAACAGGGAAGTCATCTAGCAATTTGGCATTAGAACAAGTATGCAAGCAGTTGAGATCTCCATTCCGGGAAAGAGTTCTTCCTGCAACAACAATTGA
AGTCATGCCCTGTACATTAAAACAGCGCTATCGTAAAGTTCTGGGTGGACTCCTGTTTGCTTGCAATTGTCGAGGACAATCATTTTTTGGTGAACCTAATGTCGACAGTTCAGCTTTTACTAGAAAATTTTCAGATGTACCAATAGCAGGCATGTTCTGTTTAGGAGAGATTGGGCCTCCATCTGTTCGCTCATGGGAGG
CTACAGAAGGAGGTGATACTACCAGCCGATTAAATGTTTACAGCTCCGTTTATATGGCATTTACTCATATTTCAGACTCTGCAAAGTGATGTCCCAATTACAATACATTCTCAGTGGCATTTGCAGACATTTGTTCGAGTACAACTCCTACATAGCTGTCATCCGGAACAAATTTTAATGTGCTAGGCAAAATGTTGGTG
CCTTGCATTTATGCAACAGAAAATATATATAGCAGTCTATTTTATAACCGACAAAATATGACATTGAGgtgatgtgtagaaaattgatatttaggcattgacatacttttgcgtgtatttggcaatgcctgtcagtaatttcaagaattgttgcgggattcgtttaatatgcagataataccatatgaacgttgcttttg
tgctttgcagACAGACTCTATTCAATTTAGCTCGTTCAGTTATGATCGCATCTGCCCTCTGTACTCGGCCAAAGTAATACTTTACGTTCGTTGGCTCATTTATTTTTATGCACTCAATTGCTTGAGTGAAGGAGTGCCATTCTCTTACTTCAAACCTTGAAGAACCATTGTGAAATATTTTGTGAAAAATGCAGTAAAAT
ATGATATACAAAAATATAAATGTTTACTTGCAATGATGCTAGTTTCCACGTGAATCAAACACAAATTGATATACATATGTCGCCATGATGGTTTCATTGGA