sp|Q6RVV4|TIC32_PEA ----> Short-chain dehydrogenase TIC 32, chloroplastic
Intron 1 GTAATTTCAA ... TATTATTCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 22.39 | 52 | 4 | 15 |
| A2 | 5.36 | 53 | 1 | 3 |
| A3 | 26 | 37 | 6 | 13 |
| A4 | 13.79 | 50 | 0 | 8 |
| A5 | 12 | 22 | 2 | 3 |
| A6 | 16.87 | 138 | 0 | 28 |
| A7 | 12.94 | 175 | 0 | 26 |
| A8 | 17.33 | 229 | 0 | 48 |
| A9 | 15.66 | 210 | 0 | 39 |
| A10 | 13.47 | 167 | 0 | 26 |
>TRINITY_DN107411_c0_g1_i1 from sample A3 / Example spliced isoformAGGGACCAGTCCCTGTAATAACAGGACGACTCACGCCAACTAATATGGCATGAGAAGCTCTGCTATTATAACTTTACACAAGAAGAGGTCCAACCCATTAGCTTAAACTTAGCTTAAACTTGTCTAAGGCAGCTATCTATCTATCGACGTGTGATTTCCTTCTACCACAATTTCTTCTACTCAAAATTTGTTATAATTCT
GTCTTCCTCTCAGTAGCAATTGCTGCTAACTAAATAACCAAATAAGGAATCAATGACTTGGATATGGGATTGGTGGAGAAAACCAGATTCTTCTGGTTTCACTGCTTCGTCTACAGCCGAGGATGTCACTCAAGGAATTGATGCAACCAGCCTTACTGCCATTGTTACAGGGGGGTCAAGTGGAATAGGGACAGAGACTG
TGAGGGTGCTGGCCCTGCGAGGTGCACGAGTGATAATGCCTGCCAGAAACATGGAGAGTGGCCAGAGGGTTAAAGAAGTCATTCTCAAAGACAATCCCAATGCCAAAGTGGACGTCATGGAGCTCGATCTCAGTTCACTCAATTCTGTGCAAAGATTTGCAGCGTCCTTCAAGTCATTGGATCGACCTTTGAATATTCTT
ATTAATAATGCAGGAATAATGGGTTGCCCTTTCCAGCTTTCAAAGGATGGAATAGAGCTTCATTTTGCAACCAATCATTTAGGGCACTTCTTATTGACAAGTCTTCTTTTAGACAAGCTAAAAGCAACTGCTAGAGAGACTGGAATTGAGGGGAGAATTATCAATGTTGCATCTGGAGCTCATAGACGTACATATCAAGA
GGGTATTCGCTTGGATAAAATCAATGACCAATCAGGCTTCAAACCCTTTAAAGCTTATGGGCAGTCAAAGCTTGCAAATATCTTGCATGCAAATGAGCTTGCAAGGCGTCTTCAGGAGGAAGGAGCCAATGTAACAGCCAATTCTTTACATCCAGGAGTAATATCTACTAATATTATTCGTTATATGAAAGTGCTAGCTC
TTCCTCTGGCTTTGGTGAATTTTATGTTAAAAAGCATACCACAAGGTGCAGCAACAACTTGTTATTTGGCACTTCATCCCGATGTGAAAGAAACAAGTGGAAAATACTTTGCTGATTGTAAGGAAGAAAATTCGACTTCTCATGCTAAAGACTCTGACCTGGCAAGGGGATTATGGGATCTCAGCGAAAGCCTTGTCTCA
AAAGTGAACGAGTGATTAAGCATTTGGGTTTGGTGGGATCTAAGTGAAAACTTGTTTTAAATGTAACACAAGTGTTTGTGTATTGAAGTTTTGATTGTTATCATATTTATTGAACTTAAGATGTCACCGCTGCATCACTTGCTCATGACTCTACTATGGCTGCCAAATGTAAGAATTAAATACCATAAATTTATCTGGAA
GGGTTTCAGAAGTTTATCCAGATTCTAGAATACATATTACATAATGGATTATATACAGCAGAGAAAGATATTTGAAGTTTGTGGTGTGTAACCGTGGTATATAATATCAATTCAT
>TRINITY_DN107411_c0_g1_i3 from sample A3 / Example unspliced isoform:AGGGACCAGTCCCTGTAATAACAGGACGACTCACGCCAACTAATATGGCATGAGAAGCTCTGCTATTATAACTTTACACAAGAAGAGGTCCAACCCATTAGCTTAAACTTAGCTTAAACTTGTCTAAGGCAGCTATCTATCTATCGACGTGTGATTTCCTTCTACCACAATTTCTTCTACTCAAAATTTGTTATAATTCT
GTCTTCCTCTCAGTAGCAATTGCTGCTAACTAAATAACCAAATAAGGAATCAATGACTTGGATATGGGATTGGTGGAGAAAACCAGATTCTTCTGGTTTCACTGCTTCGTCTACAGCCGAGGATGTCACTCAAGGAATTGATGCAACCAGCCTTACTGCCATTGTTACAGGGGGGTCAAGTGGAATAGGGACAGAGACTG
TGAGGGTGCTGGCCCTGCGAGGTGCACGAGTGATAATGCCTGCCAGAAACATGGAGAGTGGCCAGAGGGTTAAAGAAGTCATTCTCAAAGACAATCCCAATGCCAAAGTGGACGTCATGGAGCTCGATCTCAGTTCACTCAATTCTGTGCAAAGATTTGCAGCGTCCTTCAAGTCATTGGATCGACCTTTGAATATTCTT
ATTAATAATGCAGGAATAATGGGTTGCCCTTTCCAGCTTTCAAAGGATGGAATAGAGCTTCATTTTGCAACCAATCATTTAGGGCACTTCTTATTGACAAGTCTTCTTTTAGACAAGCTAAAAGCAACTGCTAGAGAGACTGGAATTGAGGGGAGAATTATCAATGTTGCATCTGGAGCTCATAGACGTACATATCAAGA
GGGTATTCGCTTGGATAAAATCAATGACCAATCAGGGTTAGTTTTACTCTCTGCTTAGTGTGTGCTTCTGTGTAGTATTTTGGTATGAAAATATTTTGCCTGTCAATAGCTCAGATATTCAGACTTGATTTACAACACTTATACCATGGTTGGATATTGTGTGAAATTTTTTCTGCGTTTCATAGCAGCTTCAAACCCTT
TAAAGCTTATGGGCAGTCAAAGCTTGCAAATATCTTGCATGCAAATGAGCTTGCAAGGCGTCTTCAGgtaatttcaacatgtccttgcatttgaaatcagttaatttgaaggatgaaaatgacactcgaaccttttctttattattcagGAGGAAGGAGCCAATGTAACAGCCAATTCTTTACATCCAGGAGTAATATCT
ACTAATATTATTCGTTATATGAAAGTGCTAGCTCTTCCTCTGGCTTTGGTGAATTTTATGTTAAAAAGCATACCACAAGGTGCAGCAACAACTTGTTATTTGGCACTTCATCCCGATGTGAAAGAAACAAGTGGAAAATACTTTGCTGATTGTAAGGAAGAAAATTCGACTTCTCATGCTAAAGACTCTGACCTGGCAAG
GGGATTATGGGATCTCAGCGAAAGCCTTGTCTCAAAAGTGAACGAGTGATTAAGCATTTGGGTTTGGTGGGATCTAAGTGAAAACTTGTTTTAAATGTAACACAAGTGTTTGTGTATTGAAGTTTTGATTGTTATCATATTTATTGAACTTAAGATGTCACCGCTGCATCACTTGCTCATGACTCTACTATGGCTGCCAA
ATGTAAGAATTAAATACCATAAATTTATCTGGAAGGGTTTCAGAAGTTTATCCAGATTCTAGAATACATATTACATAATGGATTATATACAGCAGAGAAAGATATTTGAAGTTTGTGGTGTGTAACCGTGGTATATAATATCAATTCAT
Intron 2 GTTAGTTTTA ... TTCATAGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 31.08 | 51 | 23 | 8 |
| A2 | 16.85 | 74 | 15 | 6.4 |
| A3 | 29.6 | 56 | 23.6 | 9.7 |
| A4 | 23.31 | 54 | 16.4 | 5.3 |
| A5 | 21.54 | 26 | 7.1 | 10.3 |
| A6 | 12.96 | 156 | 23.3 | 15.4 |
| A7 | 14.95 | 225 | 39.6 | 19.7 |
| A8 | 11.63 | 249 | 32.9 | 24.4 |
| A9 | 13.25 | 250 | 38.3 | 28.3 |
| A10 | 16.99 | 191 | 39.1 | 12.4 |
>TRINITY_DN117985_c11_g1_i6 from sample A1 / Example spliced isoformCTCTGCTATTATAACTTTACACAAGAAGAGGTCCAACCCATTAGCTTAAACTTAGCTTAAACTTGTCTAAGGCAGCTATCTATCTATCGACGTGTGATTTCCTTCTACCACAATTTCTTCTACTCAAAATTTGTTATAATTCTGTCTTCCTCTCAGTAGCAATTGCTGCTAACTAAATAACCAAATAAGGAATCAATGAC
TTGGATATGGGATTGGTGGAGAAAACCAGATTCTTCTGGTTTCACTGCTTCGTCTACAGCCGAGGATGTCACTCAAGGAATTGATGCAACCAGCCTTACTGCCATTGTTACAGGGGGGTCAAGTGGAATAGGGACAGAGACTGTGAGGGTGCTGGCCCTGCGAGGTGCACGAGTGATAATGCCTGCCAGAAACATGGAGA
GTGGCCAGAGGGTTAAAGAAGTCATTCTCAAAGACAATCCCAATGCCAAAGTGGACGTCATGGAGCTCGATCTCAGTTCACTCAATTCTGTGCAAAGATTTGCAGCGTCCTTCAAGTCATTGGATCGACCTTTGAATATTCTTATTAATAATGCAGGAATAATGGGTTGCCCTTTCCAGCTTTCAAAGGATGGAATAGAG
CTTCATTTTGCAACCAATCATTTAGGGCACTTCTTATTGACAAGTCTTCTTTTAGACAAGCTAAAAGCAACTGCTAGAGAGACTGGAATTGAGGGGAGAATTATCAATGTTGCATCTGGAGCTCATAGACGTACATATCAAGAGGGTATTCGCTTGGATAAAATCAATGACCAATCAGGCTTCAAACCCTTTAAAGCTTA
TGGGCAGTCAAAGCTTGCAAATATCTTGCATGCAAATGAGCTTGCAAGGCGTCTTCAGGAGGAAGGAGCCAATGTAACAGCCAATTCTTTACATCCAGGAGTAATATCTACTAATATTATTCGTTATATGAAAGTGCTAGCTCTTCCTCTGGCTTTGGTGAATTTTATGTTAAAAAGCATACCACAAGGTGCAGCAACAA
CTTGTTATTTGGCACTTCATCCCGATGTGAAAGAAACAAGTGGAAAATACTTTGCTGATTGTAAGGAAGAAAATTCGACTTCTCATGCTAAAGACTCTGACCTGGCAAGGGGATTATGGGATCTCAGCGAAAGCCTTGTCTCAAAAGTGAACGAGTGATTAAGCATTTGGGTTTGGTGGGATCTAAGTGAAAACTTGTTT
TAAATGTAACACAAGTGTTTGTGTATTGAAGTTTTGATTGTTATCATATTTATTGAACTTAAGATGTCACCGCTGCATCACTTGCTCATGACTCTACTATGGCTGCCAAATGTAAGAATTAAATACCATAAATTTATCTGGAAGGGTTTCAGAAGTTTATCCAGATTCTAGAATACATATTACATAATGGATTATATACA
GCAGAGAAAGATATTTGAAGTTTGTGGTGTGTAATCGTGGTATATAATATCAATTCATGCTGATTTAACTTTTATGATTTTTGAC
>TRINITY_DN117985_c11_g1_i7 from sample A1 / Example unspliced isoform:CTCTGCTATTATAACTTTACACAAGAAGAGGTCCAACCCATTAGCTTAAACTTAGCTTAAACTTGTCTAAGGCAGCTATCTATCTATCGACGTGTGATTTCCTTCTACCACAATTTCTTCTACTCAAAATTTGTTATAATTCTGTCTTCCTCTCAGTAGCAATTGCTGCTAACTAAATAACCAAATAAGGAATCAATGAC
TTGGATATGGGATTGGTGGAGAAAACCAGATTCTTCTGGTTTCACTGCTTCGTCTACAGCCGAGGATGTCACTCAAGGAATTGATGCAACCAGCCTTACTGCCATTGTTACAGGGGGGTCAAGTGGAATAGGGACAGAGACTGTGAGGGTGCTGGCCCTGCGAGGTGCACGAGTGATAATGCCTGCCAGAAACATGGAGA
GTGGCCAGAGGGTTAAAGAAGTCATTCTCAAAGACAATCCCAATGCCAAAGTGGACGTCATGGAGCTCGATCTCAGTTCACTCAATTCTGTGCAAAGATTTGCAGCGTCCTTCAAGTCATTGGATCGACCTTTGAATATTCTTATTAATAATGCAGGAATAATGGGTTGCCCTTTCCAGCTTTCAAAGGATGGAATAGAG
CTTCATTTTGCAACCAATCATTTAGGGCACTTCTTATTGACAAGTCTTCTTTTAGACAAGCTAAAAGCAACTGCTAGAGAGACTGGAATTGAGGGGAGAATTATCAATGTTGCATCTGGAGCTCATAGACGTACATATCAAGAGGGTATTCGCTTGGATAAAATCAATGACCAATCAGGgttagttttactctctgctta
gtgtgtgcttctgtgtagtattttggtatgaaaatattttgcctgtcaatagctcagatattcagacttgatttacaacacttataccatggttggatattgtgtgaaattttttctgcgtttcatagcagCTTCAAACCCTTTAAAGCTTATGGGCAGTCAAAGCTTGCAAATATCTTGCATGCAAATGAGCTTGCAAG
GCGTCTTCAGGAGGAAGGAGCCAATGTAACAGCCAATTCTTTACATCCAGGAGTAATATCTACTAATATTATTCGTTATATGAAAGTGCTAGCTCTTCCTCTGGCTTTGGTGAATTTTATGTTAAAAAGCATACCACAAGTAAGTTGCTTATACAAGGAGTCAAACTGTTATTCTTGTTCATTTCTGACATTGTTAGGTG
TTCTGATCTGAAATTCTGCCTGCCATAAACCTGGATACATC