sp|Q6DBH0|APD2_ARATH ----> E3 ubiquitin-protein ligase APD2

Intron 1 GTGAAGTTCT ... TTCTTAATAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	75	5	21	9
A2	68.97	9	12	28
A3	72.22	5	16	10
A4	63.64	10	13	22
A5	81.82	1	2	7
A6	66.36	36	61	81
A7	71.74	39	100	98
A8	68.39	49	84	128
A9	70.42	42	91	109
A10	65.4	41	75	80

>TRINITY_DN41476_c0_g1_i7 from sample A10 / Example spliced isoform

GGTCTCATACTTTTGATTCTACTGATGCAAAAACTTTTTGCCAAGTTACGCGTAATCTCTGAAGAACCTGAACTGCAAAGTGAAGAACTGCCACCAGAAAGAACTCCCTTAATACCTCAAAAGGATGGTGATGATTCAAGTTGTGGTTCCTCCTATGTTTCTCTCTCCCAGGGCGAGGAAGATGATGAGGACAGATTTTT
TTCAGGATCGCCAAGGGGTGAAGGTACTGATATAAAATCTCAGAACAGCGAGATCTGCCAGCGCCGTCTCTGTGCCATTTGTTATGATGATCATAGAGACAGTTTCTTCCTTCCTTGTGGACATTGTGCAACTTGTTTTACATGTGGGATGAGGATTGCTGAGGAATCCAACCTTTGTCCTATATGTCGGAAGAAGATTA
GAAGGGTTAGAAAAATATTTACTGTCTAGATATGCAATGTATTGAATTGGATGTGCTTGCTTGAGGAAGATTTCCTACCTTCTAGTTCGTTGTCAACTAGCAATCCTGGTTATGGGGCCACGCTATAATAGAATGCATGTCTCTGGACAAGCGTGCAGTCAGGGAAAGCCTATGAGAAGGGAAGGAATATGAAGAAATAA
ACAAGAGGAAATAGGGCTTGTTGGCGCGTGCAGACGGAGTTCTTGAATGATATTCTTTTTCAAAGGAAGAGTCACTTACATATTGTGGGAGCACAGTTTCTACGTAGTCAATTTTTGAATGGCTTATATCCAGAAGACATCCATCTGATGCAATTTCCCACGTTCTGCTACACTAGCATTAGATGCTAGAATCCTTTTGT
CACTTGTTTGTATTCCACTCCCAACACCTTTGAAAAATGGCATGGTTCCCATGAAACAGATGATATCTGCTAGACATGTTTTAGATACAGTTGATAGAGGTATGTTTACTTTGATTAAGCAAAAATCCATATTTATGACTCCGGAGCTGTTCATGCTTTTCTGTTTCAAAGGAAGGAGCTGTATATACAGTTTCAGAAAA
AAACAGGATGCATCATTTTTCTATGACAAAGCCAAG

>TRINITY_DN41476_c0_g1_i2 from sample A10 / Example unspliced isoform:

GTCAATGGTGACAAGAAGCCAGGCCCCATGCTTTATGGGTTCTCAGAAAAACCTCCATTAGACATCCGAAGAAGCTGGAATCAGAGTCGCCATGCCCTTGTACCGTCTAACCACCATCAGGAATGGATGTTTTGGTTGAACAAGGGCTCTGTACTCAGTGTCTCCTACAATGTCAAGGCTGATGACTTTTCTCAGTTAAT
ACTTATAATCGCTGAAGGTAAAATGGGTCTGAATGAATGGATTGAGGATCCTACATACCCCAACATATCTTTGTCATGGAATAGCGTACATGGAAATGGGACCATTGAATATAAGGTAGATAAAAATTCAGAATACTACATTGCAGTTGGAAATCTCAATCCTCAAAGCATGGAGGTAGATTTGAATTTCAAAATGAATA
GTGTCCTCTATGATACAACGGAAGCAAATTACAAATGTCCTTTACAGCAAGATTTGTGTGGCGTGAAGCTTTTCCTTCTTGGTGGTAACTATGCCATCCTCACCACCCCAGCTCCAACAGGGAGTCAGAGTATAGATGAGTGGTATGTCAAGCTCTCATATGGACCACGGTGGCTAACCTATGTTGTTGGGTCAGGTATA
TTTTTCGGAGAATGGTTTCAGAAACTTTCATAATATCATCTACATAGTTTATCTCTCCAAGATTGCGCTTCTCCTTTTGTGCATGGCACTAATTTTTCCTGTCAGCAGGTGGTCTCATACTTTTGATTCTACTGATGCAAAAACTTTTTGCCAAGTTACGCGTAATCTCTGAAGAACCTGAACTGCAAAGTGAAGAACTG
CCACCAGAAAGAACTCCCTTAATACCTCAAAAGGATGGTGATGATTCAAGTTGTGGTTCCTCCTATGTTTCTCTCTCCCAGGGCGAGGAAGATGATGAGGACAGATTTTTTTCAGGATCGCCAAGGGGTGAAGGTACTGATATAAAATCTCAGAACAGCGAGATCTGCCAGCGCCGTCTCTGTGCCATTTGTTATGATGA
TCATAGAGACAGTTTCTTCCTTCCTTGTGGACATTGTGCAACTTGTTTTACATGTGGGATGAGGATTGCTGAGGAATCCAACCTTTGTCCTATATGTCGGAAGAAGATTAGAAGGGTTAGAAAAATATTTACTGTCTAGATATGCAATGTATTGAATTGGATGTGCTTGCTTGAGGAAGgtgaagttcttctgtcgctga
aatagtaattcatgtgttctacatccatagggtttttgtcatcatctacataagaagcttacttttgctgctcggtatgaaattctttacatcatttgatgtgttgaaacaattcttaatagATTTCCTACCTTCTAGTTCGTTGTCAACTAGCAATCCTGGTTATGGGGCCACGCTATAATAGAATGCATGTCTCTGGA
CAAGCGTGCAGTCAGGGAAAGCCTATGAGAAGGGAAGGAATATGAAGAAATAAACAAGAGGAAATAGGGCTTGTTGGCGCGTGCAGACGGAGTTCTTGAATGATATTCTTTTTCAAAGGAAGAGTCACTTACATATTGTGGGAGCACAGTTTCTACGTAGTCAATTTTTGAATGGCTTATATCCAGAAGACATCCATCTG
ATGCAATTTCCCACGTTCTGCTACACTAGCATTAGATGCTAGAATCCTTTTGTCACTTGTTTGTATTCCACTCCCAACACCTTTGAAAAATGGCATGGTTCCCATGAAACAGATGATATCTGCTAGACATGTTTTAGATACAGTTGATAGAGGTATGTTTACTTTGATTAAGCAAAAATCCATATTTATGACTCCGGAGC
TGTTCATGCTTTTCTGTTTCAAAGGAAGGAGCTGTATATACAGTTTCAGAAAAAAACAGGATGCATCATTTTTCTATGACAAAGCCAAG

Intron 2 GTAACAACCA ... GCGAATGCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	5.77	49	0	3
A2	19.74	61	2	15
A3	20	64	1	16
A4	19.44	29	0	7
A5	4.55	21	0	1
A6	10.2	44	0	5
A7	14.81	92	0	16
A8	8.22	67	0	6
A9	8.85	103	0	10
A10	9.72	130	0	14

>TRINITY_DN123052_c2_g1_i1 from sample A2 / Example spliced isoform

ACAAAATAAGTGTTCTATTTTTATAAAATCATCATCTCGCATTATTTTCTCAAATGGGAATGAAAACCATTTTCCATTTTGAACCATTTTGTGATGTAGCTGAAATGGTGGTTTTTTGGGTTCTCGGCAAGTTTTATAATCAAATCCACGACAGGATGGACCATACAATAACCATATCATAGATTCATACCATATAAAAA
AATCGTGATTAAGAGAAAAATAATTCCCCATATCCTTATGTTCTCCTTATTCTGGTCTAGATAATTTTAGAATATATATTCTCAGAGGAAGACATTGCTAACCCTGTCACTATCTGACTTATCCTGGGGAGATGGTAATCAGCAGCGTCGATGACGTTGATTCTTGGCTTCTACGGCTCGGTGAATCTTGTGGTTGGACC
AAACTATTCTCGCCTTATACAGGTCAACTCCTTCTTTGTGCAAGAGATCAAGGTCAATGGTGACAAGAAGCCAGGCCCCATGCTTTATGGGTTCTCAGAAAAACCTCCATTAGACATCCGAAGAAGCTGGAATCAGAGTCGCCATGCCCTTGTACCGTCTAACCACCATCAGGAATGGATGTTTTGGTTGAACAAGGGCT
CTGTACTCAGTGTCTCCTACAATGTCAAGGCTGATGACTTTTCTCAGTTAATACTTATAATCGCTGAAGGTAAAATGGGTCTGAATGAATGGATTGAGGATCCTACATACCCCAACATATCTTTGTCATGGAATAGCGTACATGGAAATGGGACCATTGAATATAAGGTAGATAAAAATTCAGAATACTACATTGCAGTT
GGAAATCTCAATCCTCAAAGCATGGAGGTAGATTTGAATTTCAAAATGAATAGTGTCCTCTATGATACAACGGAAGCAAATTACAAATGTCCTTTACAGCAAGATTTGTGTGGCGTGAAGCTTTTCCTTCTTGGTGGTAACTATGCCATCCTCACCACCCCAGCTCCAACAGGGAGTCAGAGTATAGATGAGTGGTATGT
CAAGCTCTCATATGGACCACGGTGGCTAACCTATGTTGTTGGGTCAGGTGGTCTCATACTTTTGATTCTACTGATGCAAAAACTTTTTGCCAAGTTACGCGTAATCTCTGAAGAACCTGAACTGCAAAGTGAAGAACTGCCACCAGAAAGAACTCCCTTAATACCTCAAAAGGATGGTGATGATTCAAGTTGTGGTTCCT
CCTATGTTTCTCTCTCCCAGGGCGAGGAAGATGATGAGGACAGATTTTTTTCAGGATCGCCAAGGGGTGAAGGTACTGATATAAAATCTCAGAACAGCGAGATCTGCCAGCGCCGTCTCTGTGCCATTTGTTATGATGATCATAGAGACAGTTTCTTCCTTCCTTGTGGACATTGTGCAACTTGTTTTACATGTGGGATG
AGGATTGCTGAGGAATCCAACCTTTGTCCTATATGTCGGAAGAAGATTAGAAGGGTTAGAAAAATATTTACTGTCTAGATATGCAATGTATTGAATTGGATGTGCTTGCTTGAGGAAGGTGAAGTTCTTCTGTCGCTGAAATAGTAATTCATGTGTTCTACATCCATAGGGTTTTTGTCATCATCTACATAAGAAGCTTA
CTTTTGCTGCTCGGTATGAAGTTCTTTACATCATTTGATGTGTTGAAACAATTCTTAATAGATTTCCTACCTTCTAGTTCGTTGTCAACTAGCAATCCTGGTTATGGGGCCACGCTATAATAGAATGCATGTCTCTGGACAAGCGTGCAGTCAGGGAAAGCCTATGAGAAGGGAAGGAATATGAAGAAATAAACAAGAGG
AAATAGGGCTTGTTGGCGCGTGCAGACGGAGTTCTTGAATGATATTCTTTTTCAAAGGAAGAGTCACTTACATATTGTGGGAGCACAGTTTCTACGTAGTCAATTTTTGAATGGCTTATATCCAGAAGACATCCATCTGATGCAATTTCCCACGTTCTGCTACACTAGCATTAGATGCTAGAATCCTTTTGTCACTTGTT
TGTATTCCACTCCCAACACCTTTGAAAAATGGCATGGTTCCCATGAAACAGATGATATCTGCTAGACATGTTTTAGATACAGTTGATAGAGGTATGTTTACTTTGATTAAGCAAAAATCCATATTTATGACTCCGGAGCTGTTCATGCTTTTCTGTTTCAAAGGAAGGAGCTGTATATACAGTTTCAGAAAAAAACAGGA
TGCATCATTTTTCTATGACAAAGCCAAGATTTTTTTTTACTTATTTTCTCAGTTTGGGGGTACTTGTTTTTACAGAAATTTTTATTATCTGTTCATGCTTTTCTGTTTCAA

>TRINITY_DN123052_c2_g1_i4 from sample A2 / Example unspliced isoform:

TTCTTTGTGCAAGAGATCAAGgtaacaaccatgacatcctttctttcaagttcgttgaggtttactgtatttcattccatttcattaaaaaatcccaattagatttaatgggcgaatgcagGTCAATGGTGACAAGAAGCCAGGCCCCATGCTTTATGGGTTCTCAGAAAAACCTCCATTAGACATCCGAAGAAGCTGGA
ATCAGAGTCGCCATGCCCTTGTACCGTCTAACCACCATCAGGTACTATACTATTCTAGACCGTTTCAATGAGCTATCCTTATCAGAAGGAATATCTGGTCATGGACAGACAG

Intron 3 GTATATTTTT ... CTGTCAGCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	46.43	15	4.6	13
A2	33.33	8	0	4
A3	15.79	16	7.8	3
A4	50	13	7	13
A5	26.67	11	0.6	4
A6	33.33	32	6.4	16
A7	31.18	64	16.8	29
A8	31.37	35	5.4	16
A9	37.11	61	4.4	36
A10	33.8	47	9.4	24

>TRINITY_DN113952_c0_g1_i7 from sample A1 / Example spliced isoform

CCTTCTTTGTGCAAGAGATCAAGATTTAATGGGCGAATGCAGGTCAATGGTGACAAGAAGCCAGGCCCCATGCTTTATGGGTTCTCAGAAAAACCTCCATTAGACATCCGAAGAAGCTGGAATCAGAGTCGCCATGCCCTTGTACCGTCTAACCACCATCAGGAATGGATGTTTTGGTTGAACAAGGGCTCTGTACTCAG
TGTCTCCTACAATGTCAAGGCTGATGACTTTTCTCAGTTAATACTTATAATCGCTGAAGGTAAAATGGGTCTGAATGAATGGATTGAGGATCCTACATACCCCAACATATCTTTGTCATGGAATAGCGTACATGGAAATGGGACCATTGAATATAAGGTAGATAAAAATTCAGAATACTACATTGCAGTTGGAAATCTCA
ATCCTCAAAGCATGGAGGTAGATTTGAATTTCAAAATGAATAGTGTCCTCTATGATACAACGGAAGCAAATTACAAATGTCCTTTACAGCAAGATTTGTGTGGCGTGAAGCTTTTCCTTCTTGGTGGTAACTATGCCATCCTCACCACCCCAGCTCCAACAGGGAGTCAGAGTATAGATGAGTGGTATGTCAAGCTCTCG
TATGGACCACGGTGGCTAACCTATGTTGTTGGGTCAGGTGGTCTCATACTTTTGATTCTACTGATGCAAAAACTTTTTGCCAAGTTACGCGTAATCTCTGAAGAACCTGAACTGCAAAGTGAAGAACTGCCACCAGAAAGAACTCCCTTAATACCTCAAAAGGATGGTGATGATTCAAGTTGTGGTTCCTCCTATGTTTC
TCTCTCCCAGGGCGAGGAAGATGATGAGGACAGATTTTTTTCAGGATCGCCAAGGGGTGAAGGTACTGATATAAAATCTCAGAACAGCGAGATCTGCCAGCGCCGTCTCTGTGCCATTTGTTATGATGATCATAGAGACAGTTTCTTCCTTCCTTGTGGACATTGTGCAACTTGTTTTACATGTGGGATGAGGTATTCCA
ACCTTTATATTTTATTTTTCTTTATCCTCAATAAATCTCAGTAATACATCAATAAGAAAAAGAAAAAGTAAATAATGTACACAAATTGGTCTATAACAAGAAACAAAATGCA

>TRINITY_DN113952_c0_g1_i8 from sample A1 / Example unspliced isoform:

ATTAATATTGGTTTGTGAATGATTGATTGAAGAAAAAGACAACGGAAGCACTAAATTGAATGCTTGGCATAACTTGTGCTATGTGTTCATGTTAATTGTTACAATGACTAGAAACCTTTTAACATGATTCTAGAACAATATATGACATCTCTGGAGATAATTTGAACATACTTTTATGTTTTCTTGATGAAAGACAACTG
TGGGTTTTCGTCCATGAAATCAAGGTTTCCTGTTTCTGGTTCAGAGTCAGAGTATAGATGAGTGGTATGTCAAGCTCTCGTATGGACCACGGTGGCTAACCTATGTTGTTGGGTCAGgtatatttttcggagaatggtttcagaaactttcataatatcatctacatagtttatctctccaagattgcgcttctcctttt
gtgcatggcactaatttttcctgtcagcagGTGGTCTCATACTTTTGATTCTACTGATGCAAAAACTTTTTGCCAAGTTACGCGTAATCTCTGAAGAACCTGAACTGCAAAGTGAAGAACTGCCACCAGAAAGAACTCCCTTAATACCTCAAAAGGATGGTGATGATTCAAGTTGTGGTTCCTCCTATGTTTCTCTCTCC
CAGGGCGAGGAAGATGATGAGGACAGATTTTTTTCAGGATCGCCAAGGGGTGAAGGTACTGATATAAAATCTCAGAACAGCGAGATCTGCCAGCGCCGTCTCTGTGCCATTTGTTATGATGATCATAGAGACAGTTTCTTCCTTCCTTGTGGACATTGTGCAACTTGTTTTACATGTGGGATGAGGATTGCTGAGGAATC
CAACCTTTGTCCTATATGTCGGAAGAAGATTAGAAGGGTTAGAAAAATATTTACTGTCTAGATATGCAATGTATTGAATTGGATGTGCTTGCTTGAGGAAGGTGAAGTTCTTCTGTCGCTGAAATAGTAATTCATGTGTTCTACATCCATAGGGTTTTTGTCATCATCTACATAAGAAGCTTACTTTTGCTGCTCGGTAT
GAAATTCTTTACATCATTTGATGTGTTGAAACAATTCTTAATAGATTTCCTACCTTCTAGTTCGTTGTCAACTAGCAATCCTGGTTATGGGGCCACGCTATAATAGAATGCATGTCTCTGGACAAGCGTGCAGTCAGGGAAAGCCTATGAGAAGGGAAGGAATATGAAGAAATAAACAAGAGGAAATAGGGCTTGTTGGC
GCGTGCAGACGGAGTTCTTGAATGATATTCTTTTTCAAAGGAAGAGTCACTTACATATTGTGGGAGCACAGTTTCTACGTAGTCAATTTTTGAATGGCTTATATCCAGAAGACATCCATCTGATGCAATTTCCCACGTTCTGCTACACTAGCATTAGATGCTAGAATCCTTTTGTCACTTGTTTGTATTCCACTCCCAAC
ACCTTTGAAAAATGGCATGGTTCCCATGAAACAGATGATATCTGCTAGACATGTTTTAGATACAGTTGATAGAGGTATGTTTACTTTGATTAAGCAAAAATCCATATTTATGACTCCGGAGCTGTTCATGCTTTTCTGTTTCAAAGGAAGGAGCTGTATATACAGTTTCAGAAAAAAACAGGATGCATCATTTTTCTATG
ACAAAGCCAAG

Intron 4 GTATTCCAAC ... GACTCTGCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	35.59	19	17	4
A2	31.03	10	7	2
A3	24.53	20	10	3
A4	20	18	1	8
A5	16.67	5	2	0
A6	24.66	55	26	10
A7	23.3	107	45	20
A8	22.89	96	35	22
A9	23.46	93	38	19
A10	27.78	65	23	27

>TRINITY_DN39177_c0_g1_i1 from sample A7 / Example spliced isoform

AAAGAAACAGTATCCCTTTCATATAAATACCTCTTTCCTCTTTTTATGAACATAAAGAGGGATTCACAAAATAAGTGTTCTATTTTTATAAAATCATCATCTCGCATTATTTTCTCAAATGGGAATGAAAACCATTTTCCATTTTGAACCATTTTGTGATGTAGCTGAAATGGTGGTTTTTTGGGTTCTCGGCAAGTTTT
ATAATCAAATCCACGACAGGATGGACCATACAATAACCATATCATAGATTCATACCATATAAAAAAATCGTGATTAAGAGAAAAATAATTCCCCATATCCTTATGTTCTCCTTATTCTGGTCTAGATAATTTTAGAATATATATTCTCAGAGGAAGACATTGCTAACCCTGTCACTATCTGACTTATCCTGGGGAGATGG
TAATCAGCAGCGTCGATGACGTTGATTCTTGGCTTCTACGGCTCGGTGAATCTTGTGGTTGGACCAAACTATTCTCGCCTTATACAGGTCAACTCCTTCTTTGTGCAAGAGATCAAGGTCAATGGTGACAAGAAGCCAGGCCCCATGCTTTATGGGTTCTCAGAAAAACCTCCATTAGACATCCGAAGAAGCTGGAATCA
GAGTCGCCATGCCCTTGTACCGTCTAACCACCATCAGGAATGGATGTTTTGGTTGAACAAGGGCTCTGTACTCAGTGTCTCCTACAATGTCAAGGCTGATGACTTTTCTCAGTTAATACTTATAATCGCTGAAGAGATGTCGGTTGATCTCTGGCCTGAAGGTTGACAGTGTAACCTATTACAGGTAAAATGGGTCTGAA
TGAATGGATTGAGGATCCTACATACCCCAACATATCTTTGTCATGGAATAGCGTACATGGAAATGGGACCATTGAATATAAGGTAGATAAAAATTCAGAATACTACATTGCAGTTGGAAATCTCAATCCTCAAAGCATGGAGGTAGATTTGAATTTCAAAATGAATAGTGTCCTCTATGATACAACGGAAGCAAATTACA
AATGTCCTTTACAGCAAGATTTGTGTGGCGTGAAGCTTTTCCTTCTTGGTGGTAACTATGCCATCCTCACCACCCCAGCTCCAACAGGGAGTCAGAGTATAGATGAGTGGTATGTCAAGCTCTCATATGGACCACGGTGGCTAACCTATGTTGTTGGGTCAGGTGGTCTCATACTTTTGATTCTACTGATGCAAAAACTT
TTTGCCAAGTTACGCGTAATCTCTGAAGAACCTGAACTGCAAAGTGAAGAACTGCCACCAGAAAGAACTCCCTTAATACCTCAAAAGGATGGTGATGATTCAAGTTGTGGTTCCTCCTATGTTTCTCTCTCCCAGGGCGAGGAAGATGATGAGGACAGATTTTTTTCAGGATCGCCAAGGGGTGAAGGTACTGATATAAA
ATCTCAGAACAGCGAGATCTGCCAGCGCCGTCTCTGTGCCATTTGTTATGATGATCATAGAGACAGTTTCTTCCTTCCTTGTGGACATTGTGCAACTTGTTTTACATGTGGGATGAGGATTGCTGAGGAATCCAACCTTTGTCCTATATGTCGGAAGAAGATTAGAAGGGTTAGAAAAATATTTACTGTCTAGATATGCA
ATGTATTGAATTGGATGTGCTTGCTTGAGGAAGGTGAAGTTCTTCTGTCGCTGAAATAGTAATTCATGTGTTCTACATCCATAGGGTTTTTGTCATCATCTACATAAGAAGCTTACTTTTGCTGCTCGGTATGAAGTTCTTTACATCATTTGATGTGTTGAAACAATTCTTAATAGATTTCCTACCTTCTAGTTCGTTGT
CAACTAGCAATCCTGGTTATGGGGCCACGCTATAATAGAATGCATGTCTCTGGACAAGCGTGCAGTCAGGGAAAGCCTATGAGAAGGGAAGGAATATGAAGAAATAAACAAGAGGAAATAGGGCTTGTTGGCGCGTGCAGACGGAGTTCTTGAATGATATTCTTTTTCAAAGGAAGAGTCACTTACATATTGTGGGAGCA
CAGTTTCTACGTAGTCAATTTTTGAATGGCTTATATCCAGAAGACATCCATCTGATGCAATTTCCCACGTTCTGCTACACTAGCATTAGATGCTAGAATCCTTTTGTCACTTGTTTGTATTCCACTCCCAACACCTTTGAAAAATGGCATGGTTCCCATGAAACAGATGATATCTGCTAGACATGTTTTAGATACAGTTG
ATAGAGGTATGTTTACTTTGATTAAGCAAAAATCCATATTTATGACTCCGGAGCTGTTCATGCTTTTCTGTTTCAAAGGAAGGAGCTGTATATACAGTTTCAGAAAAAAACAGGATGCATCATTTTTCTATGACAAAGCCAAGATTTTTTTTTACTTATTTTCTCAGTTTGGG

>TRINITY_DN39177_c0_g1_i3 from sample A7 / Example unspliced isoform:

AAAGAAACAGTATCCCTTTCATATAAATACCTCTTTCCTCTTTTTATGAACATAAAGAGGGATTCACAAAATAAGTGTTCTATTTTTATAAAATCATCATCTCGCATTATTTTCTCAAATGGGAATGAAAACCATTTTCCATTTTGAACCATTTTGTGATGTAGCTGAAATGGTGGTTTTTTGGGTTCTCGGCAAGTTTT
ATAATCAAATCCACGACAGGATGGACCATACAATAACCATATCATAGATTCATACCATATAAAAAAATCGTGATTAAGAGAAAAATAATTCCCCATATCCTTATGTTCTCCTTATTCTGGTCTAGATAATTTTAGAATATATATTCTCAGAGGAAGACATTGCTAACCCTGTCACTATCTGACTTATCCTGGGGAGATGG
TAATCAGCAGCGTCGATGACGTTGATTCTTGGCTTCTACGGCTCGGTGAATCTTGTGGTTGGACCAAACTATTCTCGCCTTATACAGGTCAACTCCTTCTTTGTGCAAGAGATCAAGGTCAATGGTGACAAGAAGCCAGGCCCCATGCTTTATGGGTTCTCAGAAAAACCTCCATTAGACATCCGAAGAAGCTGGAATCA
GAGTCGCCATGCCCTTGTACCGTCTAACCACCATCAGGAATGGATGTTTTGGTTGAACAAGGGCTCTGTACTCAGTGTCTCCTACAATGTCAAGGCTGATGACTTTTCTCAGTTAATACTTATAATCGCTGAAGGTAAAATGGGTCTGAATGAATGGATTGAGGATCCTACATACCCCAACATATCTTTGTCATGGAATA
GCGTACATGGAAATGGGACCATTGAATATAAGGTAGATAAAAATTCAGAATACTACATTGCAGTTGGAAATCTCAATCCTCAAAGCATGGAGGTAGATTTGAATTTCAAAATGAATAGTGTCCTCTATGATACAACGGAAGCAAATTACAAATGTCCTTTACAGCAAGATTTGTGTGGCGTGAAGCTTTTCCTTCTTGGT
GGTAACTATGCCATCCTCACCACCCCAGCTCCAACAGGGAGTCAGAGTATAGATGAGTGGTATGTCAAGCTCTCATATGGACCACGGTGGCTAACCTATGTTGTTGGGTCAGGTATATTTTTCGGAGAATGGTTTCAGAAACTTTCATAATATCATCTACATAGTTTATCTCTCCAAGATTGCGCTTCTCCTTTTGTGCA
TGGCACTAATTTTTCCTGTCAGCAGGTGGTCTCATACTTTTGATTCTACTGATGCAAAAACTTTTTGCCAAGTTACGCGTAATCTCTGAAGAACCTGAACTGCAAAGTGAAGAACTGCCACCAGAAAGAACTCCCTTAATACCTCAAAAGGATGGTGATGATTCAAGTTGTGGTTCCTCCTATGTTTCTCTCTCCCAGGG
CGAGGAAGATGATGAGGACAGATTTTTTTCAGGATCGCCAAGGGGTGAAGGTACTGATATAAAATCTCAGAACAGCGAGATCTGCCAGCGCCGTCTCTGTGCCATTTGTTATGATGATCATAGAGACAGTTTCTTCCTTCCTTGTGGACATTGTGCAACTTGTTTTACATGTGGGATGAGgtattccaacctttatattt
tatttttctttatcctcaataaatctcagtaatacatcaataagaaaaagaaaaagtaaataatgtacacaaattggtctataacaagaaacaaaatgcaatgatatctgaaatgtggaaataattttccttttctaatagccaaatatagatagcatgcactttgacttggttcatggtggcttaatgtaatacacaag
ttaatagtggctttgcactgactcgtcatgactctgcagGATTGCTGAGGAATCCAACCTTTGTCCTATATGTCGGAAGAAGATTAGAAGGGTTAGAAAAATATTTACTGTCTAGATATGCAATGTATTGAATTGGATGTGCTTGCTTGAGGAAGGTGAAGTTCTTCTGTCGCTGAAATAGTAATTCATGTGTTCTACAT
CCATAGGGTTTTTGTCATCATCTACATAAGAAGCTTACTTTTGCTGCTCGGTATGAAGTTCTTTACATCATTTGATGTGTTGAAACAATTCTTAATAGATTTCCTACCTTCTAGTTCGTTGTCAACTAGCAATCCTGGTTATGGGGCCACGCTATAATAGAATGCATGTCTCTGGACAAGCGTGCAGTCAGGGAAAGCCT
ATGAGAAGGGAAGGAATATGAAGAAATAAACAAGAGGAAATAGGGCTTGTTGGCGCGTGCAGACGGAGTTCTTGAATGATATTCTTTTTCAAAGGAAGAGTCACTTACATATTGTGGGAGCACAGTTTCTACGTAGTCAATTTTTGAATGGCTTATATCCAGAAGACATCCATCTGATGCAATTTCCCACGTTCTGCTAC
ACTAGCATTAGATGCTAGAATCCTTTTGTCACTTGTTTGTATTCCACTCCCAACACCTTTGAAAAATGGCATGGTTCCCATGAAACAGATGATATCTGCTAGACATGTTTTAGATACAGTTGATAGAGGTATGTTTACTTTGATTAAGCAAAAATCCATATTTATGACTCCGGAGCTGTTCATGCTTTTCTGTTTCAAAG
GAAGGAGCTGTATATACAGTTTCAGAAAAAAACAGGATGCATCATTTTTCTATGACAAAGCCAAGATTTTTTTTTACTTATTTTCTCAGTTTGGG