sp|F4IDB2|PHL_ARATH ----> Protein PHYTOCHROME-DEPENDENT LATE-FLOWERING
Intron 1 GTCAGTGCCA ... CATATTTTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 80.49 | 8 | 1 | 33 |
| A2 | 89.29 | 3 | 8 | 25 |
| A3 | 83.87 | 5 | 1 | 26 |
| A4 | 56.25 | 7 | 3 | 9 |
| A5 | 78.57 | 3 | 2 | 11 |
| A6 | -1 | 0 | 0 | 0 |
| A7 | 37.5 | 5 | 0 | 3 |
| A8 | 100 | 0 | 0 | 2 |
| A9 | 25 | 3 | 0 | 1 |
| A10 | 66.67 | 1 | 6 | 2 |
>TRINITY_DN41554_c2_g3_i1 from sample A9 / Example spliced isoformGAAAAAAATCGCGAAACTAAAACGCAAACCAGCAAAACAAAGACGCCATCTAAACCGGATTCTAAGGGCTTACTCAATGCGGTTAATTAAATTCATAGTCAGCGCAGAGCAGTGGAATTGAGAAGCAGTGTTAAAGAGCATGGTGAGCGTCTCATTCAAGCTTGGGAAGACAGGGACCAAGTACTGTCCGAAATCCCTGA
CAGTCCAGAAGTCCTCTTCTTCTGCTCGTGATCATGGCGACAAGACCTTCGTTGAAGTCCCTGATTCCCCAACCTCCAAGAGGAAAAGAGCGGAAGTTGTGTTGTCAAAGATGAGTGGTGATCGCATTGCACTTTCACTTTCATCAACAAGCTCTGAAGGTTCTCCTATAACATCTGAGCATGAGTCTTCTTTTGCTGTG
AATTTGTTCCTTGATGGATTTTCCATTGGAAAGCCTACAGAGGTTTGTAAACAAACACTATTGTGGCTACTTACATTGCTT
>TRINITY_DN41554_c2_g3_i6 from sample A9 / Example unspliced isoform:GAAAAAAATCGCGAAACTAAAACGCAAACCAGCAAAACAAAGACGCCATCTAAACCGGATTCTAAGGGCTTACTCAATGCGGTTAATTAAATTCATAGTCAGCGgtcagtgccatttctagatcgcatgagctttttcaagacacaaaaatccagctttttaatgttgatctggctgttatagaagagcttcgtaacaat
tgtcaatgcgattctttcttattgttgggttagattgtattcgatggtattcgtctgttgtagtgacgattatctcatcgatttcatattttagCAGAGCAGTGGAATTGAGAAGCAGTGTTAAAGAGCATGGTGAGCGTCTCATTCAAGCTTGGGAAGACAGGGACCAAGTACTGTCCGAAATCCCTGACAGTCCAGAA
GTCCTCTTCTTCTGCTCGTGATCATGGCGACAAGACCTTCGTTGAAGTCCCTGATTCCCCAACCTCCAAGAGGAAAAGAGCGGAAGTTGTGTTGTCAAAGATGAGTGGTGATCGCATTGCACTTTCACTTTCATCAACAAGCTCTGAAGGTTCTCCTATAACATCTGAGCATGAGTCTTCTTTTGCTGTGAATTTGTTCC
TTGATGGATTTTCCATTGGAAAGCCTACAGAGAAAGGGAAGCAACCACCTTCAGCTCAGGAGTTGACAACACTAGTGCATCCATATGACCGAACAAGTGAGACTCTTTTCCAGGCAATTGATGGTGGTTGGCTGCCTGGAGATATTCATGAAGATATGCCATGCAAATACGTTAATGGTTGTGTTATTTGTGAGGTACGG
GATTATCGCAAGGGTTCACCAATTTCAGGTGATTCTGTTTCTTCAGGAGAATCATTTCCAGTGGTGCAGAAAGTGCTTTTGCGGCCGACTATGGAAAATATTGTAAAGGACATTTCATCCATAGCAGAGGATTCTTGGACGTACAGTGATCTAATGGAAATTGAATCAAGAATATTGAAGGCCGTGCGACCAAAACTTTG
TTTGGATCCCACCCCAATGCTCGAAACGCTATGTGAGAACCTTAATCTGAACAAGCTTAACTTGGGAGTGCCTATGACACGGCGTCAGAGAATGCAAAAAGGAGGTTTACCAGAAGTCAGGGTCTTGTCTCACAATTCTCATGGCAAGAAAGTTTCTATTGACAAGGCAACTGAGAATGCAAAATCTCTGTCAGGAAGCA
CTGCAACAACTTCTATGTGTGAAGATTCTAGTGTTTCTTGTATTCAAGAAAGTGCTGCTCCTACTTTATCTGGTGTTTCAAGCAATATACCTGCTGTAAATTCCAAAATTCAGAGCAATATACAATCA